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Functions351 in github.com/OpenGene/fastplong

⨍ Functions 351◇ Types & classes 61

Functionedit_distance_map_

src/editdistance.cpp:88

Functioneditdistance_test

src/editdistance.cpp:141

src/cmdline.h:545

Methoderror_full

src/cmdline.h:549

MethodextendBuffer

src/stats.cpp:75

MethodextendKeyToAdapter

src/evaluator.cpp:324

src/writer.cpp:57

MethodfindMiddleAdapters

src/adaptertrimmer.cpp:13

Functionfind_with_right_pos

MethodfirstIndex

src/read.cpp:87

src/read.cpp:179

src/writer.cpp:50

src/cmdline.h:349

MethodformatNumber

src/htmlreporter.cpp:22

Methodfull_description

src/cmdline.h:760

MethodgetAdapterWithSeed

src/evaluator.cpp:410

MethodgetCurrentSystemTime

src/htmlreporter.cpp:236

src/fastqreader.cpp:219

MethodgetPercents

src/htmlreporter.cpp:37

MethodgetTopKey

src/evaluator.cpp:267

Functionhamming_distance

src/editdistance.cpp:132

src/fastareader.cpp:91

MethodhasNoLineBreakAtEnd

src/fastqreader.cpp:62

src/cmdline.h:660

Methodhas_value

src/cmdline.h:649

src/writer.cpp:61

src/options.cpp:23

src/fastqreader.cpp:158

MethodinitBufferLists

src/readpool.cpp:43

MethodinitBufferLists

src/writerthread.cpp:77

MethodinitConfig

src/seprocessor.cpp:56

MethodinitOutput

src/seprocessor.cpp:37

MethodinitWriter

src/writerthread.cpp:72

MethodinitWriter

src/threadconfig.cpp:57

src/writerthread.cpp:51

MethodisConsumerFinished

src/singleproducersingleconsumerlist.h:121

src/fastqreader.cpp:369

MethodisLongRead

src/stats.cpp:586

MethodisZipFastq

src/fastqreader.cpp:356

src/writer.cpp:152

src/fastqreader.cpp:382

src/stats.cpp:837

src/stats.cpp:826

Functionlexical_cast

src/cmdline.h:100

Methodlist2string

src/stats.cpp:550

MethodlowQualCount

src/read.cpp:102

src/main.cpp:16

src/singleproducersingleconsumerlist.h:132

MethodmakeKmerTD

src/stats.cpp:778

MethodmakeListFromFileByLine

src/options.cpp:217

src/filter.cpp:234

FunctionmatchFlag

(filename, flag)

MethodmatchKnownAdapter

src/evaluator.cpp:465

src/stats.cpp:1013

src/filterresult.cpp:28

src/cmdline.h:668

src/cmdline.h:184

Methodoperator()

src/cmdline.h:147

Methodoperator()

src/cmdline.h:155

Methodoperator()

src/cmdline.h:172

Methodoperator()

src/filterresult.h:15

Methodoperator~

src/sequence.cpp:84

Methodoption_with_value

src/cmdline.h:698

Methodoption_with_value_with_reader

src/cmdline.h:782

Methodoption_without_value

src/cmdline.h:642

MethodoutputAdaptersHtml

src/filterresult.cpp:251

MethodoutputAdaptersJson

src/filterresult.cpp:134

MethodoutputRow

src/htmlreporter.cpp:14

src/cmdline.h:374

src/cmdline.h:312

MethodpassLowComplexityFilter

src/filter.cpp:67

src/sequence.cpp:21

src/stats.cpp:463

src/filterresult.cpp:98

src/htmlreporter.cpp:192

MethodprintFile

src/read.cpp:48

MethodprintFooter

src/htmlreporter.cpp:247

MethodprintHeader

src/htmlreporter.cpp:183

src/htmlreporter.cpp:220

MethodprintSummary

src/htmlreporter.cpp:44

src/seprocessor.cpp:65

MethodprocessSingleEnd

src/seprocessor.cpp:180

MethodprocessorTask

src/seprocessor.cpp:431

src/cmdline.h:165

Methodrange_reader

src/cmdline.h:154

src/cmdline.h:792

src/fastareader.cpp:47

MethodreadToBuf

src/fastqreader.cpp:142

MethodreadToBufIgzip

src/fastqreader.cpp:79

Functionreadable_typename

src/cmdline.h:115

MethodreaderTask

src/seprocessor.cpp:331

src/singleproducersingleconsumerlist.h:147

MethodrecycleToPool

src/seprocessor.cpp:174

src/htmlreporter.cpp:75

MethodreportAdapterHtml

src/filterresult.cpp:244

MethodreportJson

src/filterresult.cpp:120

MethodreverseComplement

src/sequence.cpp:79

Functionrun_command

parallel.py:128

MethodsearchAdapter

src/adaptertrimmer.cpp:59

src/cmdline.h:651

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