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github.com/OpenGene/fastplong
/ types & classes
Types & classes
61 in github.com/OpenGene/fastplong
⨍
Functions
351
◇
Types & classes
61
↓ 7 callers
Class
cmdline_error
src/cmdline.h:136
↓ 2 callers
Class
stat
src/util.h:157
↓ 1 callers
Class
Sequence
src/sequence.h:11
Class
AdapterOptions
src/options.h:125
Class
AdapterTrimmer
src/adaptertrimmer.h:13
Class
BreakOptions
src/options.h:33
Class
Evaluator
src/evaluator.h:13
Class
FastaReader
src/fastareader.h:16
Class
FastqReader
src/fastqreader.h:37
Class
FastqReaderPair
src/fastqreader.h:88
Class
Filter
src/filter.h:13
Class
FilterResult
src/filterresult.h:27
Class
HtmlReporter
src/htmlreporter.h:18
Class
JsonReporter
src/jsonreporter.h:18
Class
LockFreeListItem
src/singleproducersingleconsumerlist.h:46
Class
LowComplexityFilterOptions
src/options.h:46
Class
MaskOptions
src/options.h:20
Class
NucleotideNode
(A,T,C,G,N) & 0X07 = (1,4,7,6,3)
src/nucleotidetree.h:13
Class
NucleotideTree
src/nucleotidetree.h:25
Class
Options
src/options.h:202
Class
PolyX
src/polyx.h:13
Class
PolyXTrimmerOptions
src/options.h:58
Class
Processor
src/processor.h:11
Class
QualityCutOptions
src/options.h:69
Class
QualityFilteringOptions
src/options.h:162
Class
Read
src/read.h:14
Class
ReadLengthFilteringOptions
src/options.h:186
Class
ReadPack
src/read.h:63
Class
ReadPair
src/read.h:48
Class
ReadPool
src/readpool.h:16
Class
ReadRepository
src/seprocessor.h:21
Class
SingleEndProcessor
src/seprocessor.h:23
Class
SingleProducerSingleConsumerList
src/singleproducersingleconsumerlist.h:63
Class
SplitOptions
src/options.h:100
Class
Stats
src/stats.h:14
Class
ThreadConfig
src/threadconfig.h:16
Class
TrimmingOptions
src/options.h:147
Class
Writer
src/writer.h:39
Class
WriterThread
src/writerthread.h:16
Class
classcomp
src/filterresult.h:14
Class
default_reader
src/cmdline.h:146
Class
inflate_state
src/fastqreader.h:68
Class
is_same
src/cmdline.h:90
Class
is_same<T, T>
src/cmdline.h:95
Class
isal_gzip_header
src/fastqreader.h:67
Class
lexical_cast_t
src/cmdline.h:47
Class
lexical_cast_t<Target, Source, true>
src/cmdline.h:60
Class
lexical_cast_t<Target, std::string, false>
src/cmdline.h:78
Class
lexical_cast_t<std::string, Source, false>
src/cmdline.h:68
Class
libdeflate_compressor
src/libdeflate.h:58
Class
libdeflate_decompressor
src/libdeflate.h:166
Enum
libdeflate_result
* Result of a call to libdeflate_deflate_decompress(), * libdeflate_zlib_decompress(), or libdeflate_gzip_decompress(). */
src/libdeflate.h:187
Class
oneof_reader
src/cmdline.h:171
Class
option_base
src/cmdline.h:623
Class
option_with_value
src/cmdline.h:696
Class
option_with_value_with_reader
src/cmdline.h:780
Class
option_without_value
src/cmdline.h:640
Class
parser
src/cmdline.h:310
Class
range_reader
src/cmdline.h:153
Class
tm
src/htmlreporter.cpp:239
Class
varr
src/editdistance.cpp:79