Compile time column arguments

Compile time row arguments

Size function !\brief Returns the current size/dimension of the vector. // // \return The size of the vector. */

Returns true if and only if call_count calls will saturate this cardinality.

Runs googletest-color-test_ and returns its exit code.

Computes the bitwise AND of the 128-bit value in a and the 128-bit value in b. r := a & b https://msdn.microsoft.com/en-us/library/vstudio/6d1txsa8(

Computes the pairwise maxima of the 8 signed 16-bit integers from a and the 8 signed 16-bit integers from b. https://msdn.microsoft.com/en-us/LIBRary/

Stores four 32-bit integer values as (as a __m128i value) at the address p. https://msdn.microsoft.com/en-us/library/vstudio/edk11s13(v=vs.100).aspx

Check for string equality. This is more efficient than compare() when the relative ordering of inequal strings isn't needed.

Function: esl_opt_VerifyConfig() * Synopsis: Validates configuration after options are set. * * Purpose: Given a <g> that we think is fully con

Type of the bound stream

Type of the value element

Operand access !\brief Returns the dense matrix operand. // // \return The dense matrix operand. */

* Return nullptr if none. */

=== information about the current node ===//

Compile time column arguments

Type tag

Columns function !\brief Returns the current number of columns of the matrix. // // \return The number of columns of the matrix. */

Function: esl_buffer_SetOffset() * Synopsis: Reposition the input buffer to a new place. * Incept: SRE, Mon Jan 31 13:14:09 2011 [Janelia] *

Function: esl_opt_ProcessCmdline() * Synopsis: Parses options from the command line. * * Purpose: Process a command line (<argc> and <argv>), p

Function: esl_sqfile_OpenDigital() * Synopsis: Open an <ESL_SQFILE> for digital input. * * Purpose: Same as <esl_sqfile_Open()>, but we will ex

!\brief Loads a vector of 'float' values. // \ingroup simd // // \param address The first 'float' value to be loaded. // \return The loaded vector of

Type tag

Rows function !\brief Returns the current number of rows of the matrix. // // \return The number of rows of the matrix. */

Size function !\brief Returns the current size/dimension of the vector. // // \return The size of the vector. */

Size function !\brief Returns the current size/dimension of the vector. // // \return The size of the vector. */

Size function !\brief Returns the current size/dimension of the vector. // // \return The size of the vector. */

Size function !\brief Returns the current size/dimension of the vector. // // \return The size of the vector. */

Function: esl_fileparser_NextLine() * Incept: SRE, Tue Apr 3 08:27:22 2007 [Janelia] * * Purpose: Advance the parser to the next non-blank,

Type of the adapted matrix

Compile time submatrix arguments

Compile time submatrix arguments

Storage order of the adapted sparse matrix

Function: p7_GBackward() * Synopsis: The Backward algorithm. * * Purpose: The Backward dynamic programming algorithm. * * Given a

Function: p7_bg_NullOne() * * Purpose: Calculate the null1 lod score, for sequence <dsq> * of length <L> "aligned" to the base null m

Type of the operand

Perform a carry-less multiplication of two 64-bit integers, selected from a and b according to imm8, and store the results in dst. https://software.in

Columns function !\brief Returns the current number of columns of the matrix. // // \return The number of columns of the matrix. */

Columns function !\brief Returns the current number of columns of the matrix. // // \return The number of columns of the matrix. */

Columns function !\brief Returns the current number of columns of the matrix. // // \return The number of columns of the matrix. */

Storage order

Storage order

Function: esl_CCompare() * Synopsis: Compare two optional strings for equality. * * Purpose: Compare two optional strings <s1> and <s2> *

Function: esl_alphabet_SetDegeneracy() * Synopsis: Define degenerate symbol in custom alphabet. * * Purpose: Given an alphabet under constructi

Function: esl_mem_strtoi32() * Synopsis: Convert a chunk of text memory to an int32_t. * * Purpose: Convert the text starting at <p> to an <int

@brief returns if children are mutually exclusive alternatives */

Type tag

Function: p7_tophits_Create() * Synopsis: Allocate a hit list. * * Purpose: Allocates a new <P7_TOPHITS> hit list and return a pointer *

Rows function !\brief Returns the current number of rows of the matrix. // // \return The number of rows of the matrix. */

Rows function !\brief Returns the current number of rows of the matrix. // // \return The number of rows of the matrix. */

Rows function !\brief Returns the current number of rows of the matrix. // // \return The number of rows of the matrix. */