Types & classes — github.com/dmis-lab/bern

CodeHub MCPcopy Create free account

hub / github.com/dmis-lab/bern / types & classes

Types & classes18 in github.com/dmis-lab/bern

⨍ Functions 176◇ Types & classes 18

↓ 2 callersClassBioBERT

biobert_ner/run_ner.py:361

↓ 2 callersClassMiRNAFinder

normalizers/miRNA_normalizer.py:4

↓ 2 callersClassPathwayFinder

normalizers/pathway_normalizer.py:4

↓ 1 callersClassBasicTokenizer

Runs basic tokenization (punctuation splitting, lower casing, etc.).

biobert_ner/tokenization.py:186

↓ 1 callersClassBertConfig

Configuration for `BertModel`.

biobert_ner/modeling.py:30

↓ 1 callersClassBertModel

BERT model ("Bidirectional Encoder Representations from Transformers"). Example usage: ```python # Already been converted into WordPiece

biobert_ner/modeling.py:106

↓ 1 callersClassFastPredict

biobert_ner/fast_predict2.py:20

↓ 1 callersClassFullTokenizer

Runs end-to-end tokenziation.

biobert_ner/tokenization.py:162

↓ 1 callersClassInputExample

A single training/test example for simple sequence classification.

biobert_ner/run_ner.py:113

↓ 1 callersClassInputFeatures

A single set of features of data.

biobert_ner/run_ner.py:131

↓ 1 callersClassMain

↓ 1 callersClassNerProcessor

biobert_ner/run_ner.py:193

↓ 1 callersClassNormalizer

normalize.py:15

↓ 1 callersClassThreadedHTTPServer

↓ 1 callersClassWordpieceTokenizer

Runs WordPiece tokenziation.

biobert_ner/tokenization.py:301

ClassDataProcessor

Base class for data converters for sequence classification data sets.

biobert_ner/run_ner.py:142

ClassGetHandler

biobert_ner/utils.py:7