List and descriptions of acquisitions . <p>Java class for AcquisitionListType complex type. <p>The following schema fragment specifies the expected

Check if there is a reference to a source file in the scan settings parameters @author Salva

Scan or acquisition from original raw file used to create this peak list, as specified in sourceFile. <p>Java class for AcquisitionType complex type.

The structure into which encoded binary data goes. <p>Java class for BinaryDataArrayType complex type. <p>The following schema fragment specifies th

List and descriptions of CV <p>Java class for CVListType complex type. <p>The following schema fragment specifies the expected content contained wit

This element holds additional data or annotation. Only controlled values are allowed here. <p>Java class for CVParamType complex type. <p>The follow

Information about an ontology/CV source and a short 'lookup' tag to refer to. <p>Java class for CVType complex type. <p>The following schema fragmen

A context which cluster the different contexts for a same error message

List with the different components used in the mass spectrometer. <p>Java class for ComponentListType complex type. <p>The following schema fragment

<p>Java class for ComponentType complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt

Audit information concerning the means by which the originator/owner of this mzML file can be identified, and contacted if necessary. <p>Java class f

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

List and descriptions of data processing applied to this data. <p>Java class for DataProcessingListType complex type. <p>The following schema fragme

Description of the software, and the way in which it was used to generate the peak list. <p>Java class for DataProcessingType complex type. <p>The f

Check if the acquisition software has an explicit description of the parameters @author Salva

Checksum to verify the file. <p>Java class for FileChecksumType complex type. <p>The following schema fragment specifies the expected content contai

Information pertaining to the entire mzML file (i.e. not specific to any part of the data set) is stored here. <p>Java class for FileDescriptionType

Simple wrapper class to allow synchronisation on the hasNext() and next() methods of the iterator.

Simple lock class so the main thread can detect worker threads' completion.

Runnable that requests the next spectrum from the synchronised iterator wrapper, and validates it.

Checks if the manufacturer and model are in the cv terms of the instrument configuration as well as the customization term value is not empty @author

List and descriptions of instruments. <p>Java class for InstrumentListType complex type. <p>The following schema fragment specifies the expected con

<p>Java class for InstrumentSoftwareRefType complex type. <p>The following schema fragment specifies the expected content contained within this class

Description of the components of the mass spectrometer used <p>Java class for InstrumentType complex type. <p>The following schema fragment specifie

Check if the wavelength CV Term has an empty value @author Salva

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

This class is for displaying a validator FATAL message when an exception is thrown by the psi xml parser. <br/> This rule is not in the list of object

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

Check if there is an spectra file or a parameter file in the source file list @author Salva

Check if there is a matrix solution cv term in the source component, and if the value is empty or not. @author Salva

This class @author martlenn @version $Id$

This schema can capture the use of a mass spectrometer, the data generated, and the initial processing of that data (to the level of the peak list). P

@author Florian Reisinger Date: 17-Mar-2009 @since 1.0

This class represents the PSI mzML semantic validator. @author Lennart Martens, modified by Juan Antonio Vizcaino and Salvador Mart�nez @vers

@author __USER__

This object contains factory methods for each Java content interface and Java element interface generated in the psidev.psi.ms.rulefilter.jaxb package

This object contains factory methods for each Java content interface and Java element interface generated in the psidev.psi.ms.mzml.mapping.jaxb packa

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

Check if the source component is any other ionization source different from MALDI or ESI @author Salva

<p>Java class for ParamGroupRefType complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre>

Structure allowing the use of a controlled (cvParam) or uncontrolled vocabulary (userParam), or a reference to a predefined set of these in this mzML

Check if one source file in the source file list is a parameter file or not @author Salva

List and descriptions of precursors to the spectrum currently being described. <p>Java class for PrecursorListType complex type. <p>The following sc

The method of precursor ion selection and activation <p>Java class for PrecursorType complex type. <p>The following schema fragment specifies the ex

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

List and descriptions of ReferenceableParamGroups <p>Java class for ReferenceableParamGroupListType complex type. <p>The following schema fragment s

ParamGroup that can be referenced from elsewhere in this mzML document by using the 'paramGroupRef' element in that location to reference the 'id' att

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

Provides convenience methods to extract resources from the classpath. @author Nils Hoffmann

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

Interface that provides the methods to implement that parse rule filter xml files. That files follow the xsd schema located at: http://proteo.cnb.csic

This class provides the methods to maintain a list of object rules and a list of cv mapping rules to skip. Its behaviour is configured by a configurat

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

<p>Java class for RunType complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;compl

List and descriptions of samples. <p>Java class for SampleListType complex type. <p>The following schema fragment specifies the expected content con

Expansible description of the sample used to generate the dataset, named in sampleName. <p>Java class for SampleType complex type. <p>The following

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

The instrument's 'run time' parameters; common to the whole of this spectrum. <p>Java class for ScanType complex type. <p>The following schema fragm

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

Check if there is an acquisition software and a data processing software in the software list @author Salva

List and descriptions of software used to acquire and/or process the data in this mzML file. <p>Java class for SoftwareListType complex type. <p>The

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

Software information (the software that produced the peak list). <p>Java class for SoftwareType complex type. <p>The following schema fragment speci

List and descriptions of source files <p>Java class for SourceFileListType complex type. <p>The following schema fragment specifies the expected con

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

Description of the source file, including location and type. <p>Java class for SourceFileType complex type. <p>The following schema fragment specifi

Description of the parameters for the mass spectrometer for a given acquisition (or list of acquisitions). <p>Java class for SpectrumDescriptionType

List and descriptions of spectra. <p>Java class for SpectrumListType complex type. <p>The following schema fragment specifies the expected content c

Check if the collision gas CV Term in activation has an empty value. Check if binary data array is empty. @author Salva

The structure that captures the generation of a peak list (including the underlying acquisitions) <p>Java class for SpectrumType complex type. <p>Th

This is the 3rd version of SwingWorker (also known as SwingWorker 3), an abstract class that you subclass to perform GUI-related work in a dedicated t

Created by IntelliJ IDEA. User: javizca Date: 16-jul-2008 Time: 9:37:28 To change this template use File | Settings | File Templates.

Class to maintain reference to current worker thread under separate synchronization control.

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

<p>Java class for anonymous complex type. <p>The following schema fragment specifies the expected content contained within this class. <pre> &lt;com

Uncontrolled user parameters (vocabulary). <p>Java class for UserParamType complex type. <p>The following schema fragment specifies the expected con