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Functions1,029 in github.com/FDA/openfda

Methodcomplete
(self)
openfda/tasks.py:63
Methodcomplete
(self)
openfda/spl/pipeline.py:133
Methodcomplete
(self)
openfda/spl/pipeline.py:158
Methodcompute_splits
The default behavior for splitting files is to have one split per file.
openfda/parallel/inputs.py:93
Methodcompute_splits
The default behavior for splitting files is to have one split per file.
openfda/parallel/inputs.py:135
Functioncopy_mapping
Copy the mappings and settings from `source_index` to `target_index`. `target_index` must not exist. This operation does not copy any data.
openfda/index_util.py:372
Methodcreate_reader
(self, split)
openfda/parallel/inputs.py:75
Methodcreate_reader
(self, split)
openfda/parallel/inputs.py:132
Methodcreate_reader
(self, split)
openfda/parallel/inputs.py:205
Methodcreate_reader
(self, split)
openfda/parallel/inputs.py:236
Methodcreate_reader
(self, split)
openfda/parallel/inputs.py:271
Methodcreate_writer
(self, prefix, shard_idx, num_shards)
openfda/parallel/outputs.py:82
Functiondata_dir
(*subdirs)
openfda/config.py:51
Functiondict_constructor
(loader, node)
scripts/generate_fields_yaml.py:162
Functiondisable_downloads
()
openfda/config.py:42
Functiondownload_requests
(url, output_filename)
openfda/common.py:235
Methoddrug
(self, nodeset, json)
openfda/adae/pipeline.py:576
Functiondump_index
Dump the index `index` to disk as compressed JSON files. If a query is passed into the function, then it is filters out those records before the
openfda/index_util.py:44
Functionean_8_valid
Verify if code is valid EAN8 barcode. Returns True|False
openfda/res/ean.py:72
Functioneither
(c)
openfda/faers/xml_to_json.py:58
Methodentries
(self)
openfda/parallel/inputs.py:79
Methodentries
(self)
openfda/parallel/inputs.py:158
Methodentries
(self)
openfda/parallel/inputs.py:171
Methodentries
(self)
openfda/parallel/inputs.py:177
Methodentries
(self)
openfda/parallel/inputs.py:185
Methodentries
(self)
openfda/parallel/inputs.py:191
Methodentries
(self)
openfda/parallel/inputs.py:210
Methodentries
(self)
openfda/parallel/inputs.py:245
Methodentries
(self)
openfda/parallel/inputs.py:275
Methodentries
(self)
openfda/parallel/inputs.py:289
Functiones_client
(host=None, port=9200)
openfda/config.py:44
Functionexpect_error
(query)
openfda/tests/api_test_helpers.py:86
Functionextract_and_clean
A utility function that extracts all of the zip files in a directory and converts the files from a source encoding to a target encoding.
openfda/download_util.py:14
Functionextract_date
Will transform a timestamp string to valid date string in YYYY-MM-DD format. :param date_str: A string having timestamp in YYYYMMDDhhmmss :retu
openfda/common.py:277
Functionextract_display_name
(tree)
openfda/spl/extract.py:64
Functionextract_duns
(tree)
openfda/spl/extract.py:68
Functionextract_effective_time
(tree)
openfda/spl/extract.py:52
Functionextract_id
(tree)
openfda/spl/extract.py:44
Functionextract_ndc_from_recall
(recall)
openfda/res/extract.py:46
Functionextract_package_ndcs
Extracts the full labelercode-productcode-packagecode NDCs
openfda/spl/extract.py:88
Functionextract_product_ndcs
Extracts the partial (labelercode-productcode) NDCs.
openfda/spl/extract.py:76
Functionextract_set_id
(tree)
openfda/annotation_table/extract_unii.py:54
Functionextract_set_id
(tree)
openfda/spl/extract.py:48
Functionextract_title
(tree)
openfda/spl/extract.py:41
Functionextract_unii
Extracts the UNII from Pharmalogical Indexing XML
openfda/annotation_table/extract_unii.py:72
Functionextract_unii_name
Extracts the name of the UNII from the Pharmalogical Indexing XML
openfda/annotation_table/extract_unii.py:77
Functionextract_unii_other_code
Extract the codes for other ingredients
openfda/annotation_table/extract_unii.py:83
Functionextract_unii_other_name
Extract the display names for other ingredients
openfda/annotation_table/extract_unii.py:91
Functionextract_upc_from_recall
(recall)
openfda/res/extract.py:75
Functionextract_version_number
(tree)
openfda/spl/extract.py:60
Methodfilter
(self, data)
openfda/device_clearance/pipeline.py:87
Methodfilter
This is the standard filter copied from Device Harmonization with a small difference in that it does not fail for missing product codes, which is
openfda/device_recall/pipeline.py:389
Methodfilter
(self, data)
openfda/device_pma/pipeline.py:79
Methodfinalize
Move the output JSON file to the final location. There should only be one file -- this will fail if the user specified multiple shards!
openfda/parallel/outputs.py:89
Methodfinalize
(self, tmp_dir, final_dir)
openfda/parallel/outputs.py:111
Methodfinalize
(self, tmp_dir, final_dir)
openfda/parallel/outputs.py:133
Functionflat_mapping
(mapping)
scripts/generate_fields_yaml.py:277
Methodflush
(self)
openfda/parallel/outputs.py:78
Methodflush
(self)
openfda/parallel/outputs.py:125
Functiongenerate
(mapping, schema, filename)
scripts/generate_fields_yaml.py:194
Functionget_k_number
(data)
openfda/common.py:213
Functionget_mapping
Get the Elasticsearch mapping for an index.
openfda/index_util.py:351
Functionget_p_number
(data)
openfda/common.py:218
Functionhandle_barcode
(_, barcode)
openfda/spl/process_barcodes.py:26
Methodhandle_device
Transform the dictionary, which follows the structure of UDI XML files, to a new one that matches the UDI mapping in ES.
openfda/device_udi/pipeline.py:171
Methodhandle_safety_report
Handle a single safety_report entry.
openfda/faers/xml_to_json.py:102
Functionharmonization_extract_worker
(args)
openfda/annotation_table/unii_harmonization.py:38
Methodharmonize
(self, data)
openfda/registration/pipeline.py:553
Methodharmonize
(self, data)
openfda/maude/pipeline.py:740
Functionharmonize_unii
(out_file, product_file, unii_file, class_index_dir)
openfda/annotation_table/unii_harmonization.py:62
Methodincrement
(self, key)
openfda/parallel/mapreduce.py:114
Functionindex_with_checksum
Index documents in `batch`, inserting them into `index`. As an optimization, a SHA1 checksum is computed for each document. If a document alr
openfda/index_util.py:274
Functionindex_without_checksum
A function for bulk loading a batch into an index without versioning. This operation assumes that the index was newly created (or erased) prior
openfda/index_util.py:248
Methodingredient
(self, nodeset, json)
openfda/adae/pipeline.py:655
Functionis_newer
Returns true if file `a` is newer than `b`, or `b` does not exist.
openfda/common.py:201
Functionis_older
Returns true if file `a` is older than `b`, or `a` does not exist.
openfda/common.py:189
Functionis_original_packager
Returns true if this SPL's manufacturer is the original packager.
openfda/spl/extract.py:72
Methodis_other
(data)
openfda/device_recall/pipeline.py:135
Functionjson
(query)
openfda/tests/api_test_helpers.py:92
FunctionlimitlessCountReq
(req, res)
api/faers/api.js:850
Functionload_unii_from_csv
(file)
openfda/annotation_table/extract_unii.py:59
Functionmain
(argv)
scripts/dbreader.py:30
Functionmain
(argv)
openfda/drugsfda/tests/pipeline_test.py:62
Functionmain
(argv)
openfda/annotation_table/tests/pipeline_test.py:101
Functionmain
(argv)
openfda/ndc/tests/pipeline_test.py:422
Functionmain
(argv)
openfda/spl/tests/process_barcodes_test.py:49
Functionmain
(argv)
openfda/adae/tests/pipeline_test.py:212
Functionmain
(argv)
openfda/tests/parallel_test.py:172
Functionmain
(argv)
openfda/device_udi/tests/pipeline_test.py:185
Functionmain
(argv)
openfda/covid19serology/tests/pipeline_test.py:74
Methodmap
(self, key, value, output)
openfda/drugsfda/pipeline.py:108
Methodmap
(self, key, value, output)
openfda/drugsfda/pipeline.py:154
Methodmap
(self, key, value, output)
openfda/drugsfda/pipeline.py:226
Methodmap
(self, key, value, output)
openfda/drugsfda/pipeline.py:260
Methodmap
(self, key, value, output)
openfda/drugsfda/pipeline.py:298
Methodmap
(self, key, value, output)
openfda/drugsfda/pipeline.py:345
Methodmap
(self, key, value, output)
openfda/drugsfda/pipeline.py:379
Methodmap
(self, key, application, out)
openfda/drugsfda/pipeline.py:584
Methodmap
(self, key, drug, out)
openfda/drugsfda/annotate.py:120
Methodmap
(self, key, value, output)
openfda/substance_data/pipeline.py:657
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