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Functions22,481 in github.com/EarlhamInst/KAT

⨍ Functions 22,481◇ Types & classes 25,829
↓ 13 callersFunctionstrerror__
Select the correct version (GNU or XSI) version of ::strerror_r. err::strerror_ behaves like the GNU version of strerror_r, regardless of which versio
deps/jellyfish-2.2.0/include/jellyfish/err.hpp:65
↓ 13 callersMethodtoi
deps/boost/boost/regex/v4/cpp_regex_traits.hpp:1072
↓ 13 callersFunctiontransform
deps/boost/boost/regex/icu.hpp:70
↓ 13 callersFunctionu16_seq
deps/boost/libs/locale/test/test_utf.cpp:51
↓ 13 callersFunctionu32_seq
deps/boost/libs/locale/test/test_utf.cpp:43
↓ 13 callersFunctionweek_of_year
Get period_type for: The week number in the year
deps/boost/boost/locale/date_time.hpp:145
↓ 13 callersFunctionwrap
(name)
scripts/kat/plot/misc.py:45
↓ 13 callersMethodwrite
deps/seqan-library-2.0.0/include/seqan/basic/pair_base.h:239
↓ 12 callersMethodGet
deps/jellyfish-2.2.0/unit_tests/gtest/src/gtest-all.cc:1381
↓ 12 callersFunctionSWIG_AsCharPtrAndSize
deps/jellyfish-2.2.0/swig/perl5/swig_wrap.cpp:1601
↓ 12 callersFunctionSWIG_AsVal_unsigned_SS_int
deps/jellyfish-2.2.0/swig/python/swig_wrap.cpp:3323
↓ 12 callersFunctionSWIG_AsVal_unsigned_SS_int
deps/jellyfish-2.2.0/swig/ruby/swig_wrap.cpp:1995
↓ 12 callersFunction_intPow
deps/seqan-library-2.0.0/include/seqan/basic/math_functions.h:65
↓ 12 callersMethodaccumulator_set
////////////////////////////////////////////////////////////////////////// default-construct all contained accumulators
deps/boost/boost/accumulators/framework/accumulator_set.hpp:139
↓ 12 callersFunctionadd
deps/seqan-library-2.0.0/include/seqan/map/map_skiplist.h:735
↓ 12 callersMethodadd
deps/jellyfish-2.2.0/swig/ruby/swig_wrap.cpp:2310
↓ 12 callersFunctionassign
deps/seqan-library-2.0.0/include/seqan/sequence/string_cstyle.h:445
↓ 12 callersFunctionassign
deps/seqan-library-2.0.0/include/seqan/misc/sse2.h:118
↓ 12 callersFunctionassignCargo
deps/seqan-library-2.0.0/include/seqan/graph_types/graph_edgestump.h:498
↓ 12 callersFunctionassignSource
deps/seqan-library-2.0.0/include/seqan/align/gaps_base.h:912
↓ 12 callersFunctionbegin
deps/seqan-library-2.0.0/include/seqan/sequence/string_cstyle.h:305
↓ 12 callersMethodbegin
deps/boost/boost/regex/v4/match_results.hpp:332
↓ 12 callersFunctioncas
deps/jellyfish-2.2.0/include/jellyfish/compare_and_swap.hpp:59
↓ 12 callersFunctionceil
deps/boost/boost/chrono/ceil.hpp:25
↓ 12 callersFunctioncheck_sequence
deps/boost/libs/algorithm/test/sort_subrange_test.cpp:27
↓ 12 callersFunctioncheck_sequence
deps/boost/libs/algorithm/test/partition_subrange_test.cpp:27
↓ 12 callersMethodclear
deps/seqan-library-2.0.0/include/seqan/graph_types/graph_impl_tree.h:347
↓ 12 callersMethodclose
deps/seqan-library-2.0.0/include/seqan/system/system_mutex.h:88
↓ 12 callersFunctioncompare_string
deps/boost/boost/locale/boundary/segment.hpp:58
↓ 12 callersFunctionconvert
deps/boost/boost/filesystem/path_traits.hpp:109
↓ 12 callersFunctioncopy
deps/boost/boost/regex/v4/regex_workaround.hpp:137
↓ 12 callersMethodcreate_node
deps/boost/boost/unordered/detail/implementation.hpp:1852
↓ 12 callersMethoddate
deps/boost/boost/date_time/time.hpp:72
↓ 12 callersMethoddequeue
deps/jellyfish-2.2.0/include/jellyfish/circular_buffer.hpp:169
↓ 12 callersFunctiondestroy_alloc_n
U models unsigned integral constant
deps/boost/boost/container/detail/copy_move_algo.hpp:955
↓ 12 callersMethodelements
(self)
scripts/kat/peak.py:59
↓ 12 callersFunctionempty
deps/seqan-library-2.0.0/include/seqan/parallel/parallel_lock.h:333
↓ 12 callersMethodempty
deps/boost/boost/program_options/variables_map.hpp:188
↓ 12 callersFunctionend
deps/seqan-library-2.0.0/include/seqan/sequence_journaled/journal_entries_sorted_array.h:209
↓ 12 callersMethodend
deps/boost/boost/intrusive/bstree.hpp:157
↓ 12 callersFunctionfind_format_all
deps/boost/boost/algorithm/string/find_format.hpp:251
↓ 12 callersFunctionfloor
deps/seqan-library-2.0.0/include/seqan/math/math_rational.h:554
↓ 12 callersMethodformat
deps/boost/libs/locale/src/icu/formatter.cpp:158
↓ 12 callersMethodget
deps/boost/libs/chrono/example/time2_demo.cpp:288
↓ 12 callersFunctiongetOccurrences
deps/seqan-library-2.0.0/include/seqan/index/index_qgram.h:2656
↓ 12 callersFunctiongetSource
deps/seqan-library-2.0.0/include/seqan/graph_types/graph_edgestump.h:718
↓ 12 callersMethodget_bucket
deps/boost/boost/unordered/detail/implementation.hpp:2954
↓ 12 callersMethodget_executor
deps/boost/boost/thread/future.hpp:194
↓ 12 callersMethodhasComment
deps/jellyfish-2.2.0/lib/jsoncpp.cpp:2995
↓ 12 callersFunctionhashNext
deps/seqan-library-2.0.0/include/seqan/index/shape_gapped.h:611
↓ 12 callersFunctionhour
Get period_type for: 24 clock hour [0..23]
deps/boost/boost/locale/date_time.hpp:125
↓ 12 callersFunctioninclusive_scan
deps/boost/boost/algorithm/cxx17/inclusive_scan.hpp:25
↓ 12 callersMethodinit
deps/boost/boost/thread/future.hpp:931
↓ 12 callersFunctioninitial_size
deps/boost/boost/unordered/detail/implementation.hpp:359
↓ 12 callersMethodinsert_unique_commit
<b>Requires</b>: "header" must be the header node of a tree. "commit_data" must have been obtained from a previous call to "insert_unique_check". No o
deps/boost/boost/intrusive/bstree_algorithms.hpp:958
↓ 12 callersMethodis_empty
Returns true if there is no parameters registered
deps/boost/boost/test/utils/runtime/parameter.hpp:444
↓ 12 callersMethodis_pos_infinity
check to see if date is greater than all possible dates
deps/boost/boost/date_time/time.hpp:111
↓ 12 callersFunctioniter
deps/seqan-library-2.0.0/include/seqan/sequence/string_packed.h:679
↓ 12 callersFunctioniter
deps/seqan-library-2.0.0/include/seqan/sequence/string_packed_old.h:567
↓ 12 callersFunctioniterator_distance
deps/boost/boost/intrusive/detail/iterator.hpp:229
↓ 12 callersFunctionlength
deps/seqan-library-2.0.0/include/seqan/pipe/pipe_base.h:381
↓ 12 callersFunctionlength
deps/seqan-library-2.0.0/include/seqan/sequence/sequence_interface.h:765
↓ 12 callersFunctionlength
deps/seqan-library-2.0.0/include/seqan/misc/dequeue.h:332
↓ 12 callersFunctionlength
deps/seqan-library-2.0.0/include/seqan/file/file_page.h:178
↓ 12 callersMethodload
deps/boost/boost/atomic/detail/ops_linux_arm.hpp:105
↓ 12 callersMethodloadHash
lib/src/input_handler.cc:204
↓ 12 callersMethodlookup_classname
deps/boost/boost/regex/v4/w32_regex_traits.hpp:618
↓ 12 callersFunctionlowerBoundAlignedReads
deps/seqan-library-2.0.0/include/seqan/store/store_align.h:529
↓ 12 callersMethodmessage
deps/boost/libs/thread/src/future.cpp:33
↓ 12 callersFunctionmonth
Get period_type for: The month of year, calendar specific, in Gregorian [0..11]
deps/boost/boost/locale/date_time.hpp:95
↓ 12 callersMethodnext
deps/jellyfish-2.2.0/unit_tests/test_mer_iterator.cc:20
↓ 12 callersMethodoffset
deps/boost/boost/interprocess/detail/utilities.hpp:174
↓ 12 callersFunctionomp_get_wtime
deps/seqan-library-2.0.0/include/seqan/parallel/parallel_macros.h:114
↓ 12 callersFunctionpartition_subrange
deps/boost/boost/algorithm/sort_subrange.hpp:86
↓ 12 callersFunctionpopFront
deps/seqan-library-2.0.0/include/seqan/misc/dequeue.h:232
↓ 12 callersMethodpop_back
Deprecated
deps/boost/boost/range/iterator_range_core.hpp:339
↓ 12 callersFunctionportable_directory_name
deps/boost/libs/filesystem/src/portability.cpp:96
↓ 12 callersFunctionportable_file_name
deps/boost/libs/filesystem/src/portability.cpp:105
↓ 12 callersMethodread
deps/seqan-library-2.0.0/include/seqan/system/file_sync.h:174
↓ 12 callersFunctionreadLine
deps/seqan-library-2.0.0/include/seqan/stream/tokenization.h:410
↓ 12 callersFunctionreadOne
deps/seqan-library-2.0.0/include/seqan/stream/tokenization.h:365
↓ 12 callersFunctionregex_search
deps/boost/boost/regex/v4/regex_search.hpp:37
↓ 12 callersMethodrelease
deps/boost/boost/thread/lock_algorithms.hpp:369
↓ 12 callersFunctionrename
deps/boost/libs/filesystem/src/operations.cpp:1695
↓ 12 callersMethodreserve_for_insert
deps/boost/boost/unordered/detail/implementation.hpp:4400
↓ 12 callersFunctionresizeVertexMap
deps/seqan-library-2.0.0/include/seqan/misc/union_find.h:296
↓ 12 callersFunctionscoreMismatch
deps/seqan-library-2.0.0/include/seqan/score/score_edit.h:93
↓ 12 callersFunctionsetBeginPosition
deps/seqan-library-2.0.0/include/seqan/sequence/segment_infix.h:259
↓ 12 callersMethodsize
deps/seqan-library-2.0.0/include/seqan/map/sumlist_mini.h:118
↓ 12 callersFunctionsort_subrange
deps/boost/boost/algorithm/sort_subrange.hpp:45
↓ 12 callersFunctionstatic_shared_from_this
deps/boost/boost/thread/future.hpp:97
↓ 12 callersMethodstr
deps/jellyfish-2.2.0/include/jellyfish/time.hpp:101
↓ 12 callersMethodstyle
deps/boost/libs/program_options/src/cmdline.cpp:113
↓ 12 callersFunctionswap
deps/jellyfish-2.2.0/include/jellyfish/mapped_file.hpp:154
↓ 12 callersFunctionswap
deps/boost/boost/thread/lock_types.hpp:321
↓ 12 callersMethodswap
swap (note: linear complexity)
deps/boost/boost/array.hpp:158
↓ 12 callersFunctionthrow_length_error
deps/boost/boost/container/throw_exception.hpp:68
↓ 12 callersFunctiontimed_lock
deps/boost/boost/thread/lock_types.hpp:366
↓ 12 callersFunctiontolower
deps/boost/boost/regex/icu.hpp:137
↓ 12 callersFunctiontransform_inclusive_scan
deps/boost/boost/algorithm/cxx17/transform_inclusive_scan.hpp:26
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