MCPcopy Create free account

hub / github.com/derrynknife/SurPyval / functions

Functions1,523 in github.com/derrynknife/SurPyval

Functionidfunc
(x)
surpyval/tests/univariate/parametric/test_fit.py:110
Methodiif
Instantaneous Incidence Function
surpyval/univariate/competing_risks/nonparametric/competing_risks.py:73
Methodiif
(self, x, *params)
surpyval/recurrent/parametric/crow_amsaa.py:59
Methodiif
Compute the intensity function based on the fitted model. No need to pass parameters as it uses the parameters of the fitted model.
surpyval/recurrent/parametric/parametric_recurrence.py:110
Methodiif
(self, x, *params)
surpyval/recurrent/parametric/duane.py:57
Methodiif
Instantaneous intensity function (event rate) at ``x``.
surpyval/recurrent/parametric/counting_process.py:28
Methodiif
(self, x, *params)
surpyval/recurrent/parametric/cox_lewis.py:61
Methodiif
(self, x, rate)
surpyval/recurrent/regression/hpp_proportional_intensity.py:59
Methodiif
(self, x, rate)
surpyval/recurrent/regression/nhpp_proportional_intensity.py:66
Functioninit_from_bounds
(dist)
surpyval/utils/__init__.py:46
Functioninterval_data
Fixture for interval censored data
surpyval/tests/utils/test_surpyval_data.py:27
Methodinv_cif
(self, N, *params)
surpyval/recurrent/parametric/crow_amsaa.py:69
Methodinv_cif
(self, N, *params)
surpyval/recurrent/parametric/duane.py:65
Methodinv_cif
Time by which ``N`` events are expected; the inverse of ``cif``.
surpyval/recurrent/parametric/counting_process.py:69
Methodinv_cif
(self, N, *params)
surpyval/recurrent/parametric/cox_lewis.py:71
Methodinv_cif
(self, cif, rate)
surpyval/recurrent/regression/hpp_proportional_intensity.py:65
Methodinv_cif
(self, cif, rate)
surpyval/recurrent/regression/nhpp_proportional_intensity.py:72
Methodjac_hess
(beta)
surpyval/univariate/regression/proportional_hazards/cox_ph.py:231
Methodkendall_tau
(self, rho)
surpyval/multivariate/parametric/copula/elliptical.py:55
Methodkendall_tau
(self)
surpyval/multivariate/parametric/copula/copula_model.py:79
Methodkendall_tau
(self, *params)
surpyval/multivariate/parametric/copula/archimedean.py:35
Methodkendall_tau
(self, theta)
surpyval/multivariate/parametric/copula/archimedean.py:89
Methodkendall_tau
(self, theta)
surpyval/multivariate/parametric/copula/archimedean.py:112
Methodkijima_i
(self, v, x, q)
surpyval/recurrent/renewal/generalized_renewal.py:73
Methodkijima_ii
(self, v, x, q)
surpyval/recurrent/renewal/generalized_renewal.py:76
Functionlfp_model
()
surpyval/tests/univariate/parametric/test_confidence_bounds.py:104
Functionload_bearing_failures
Data on the failure of bearings, from [1]_. "Cycles to Failure (millions)" is the number of cycles to failure in millions of cycles. Ref
surpyval/datasets/__init__.py:12
Functionload_bofors_steel
Returns a Pandas DataFrame containing the data of the tensile strength of Bofors Steel from [2]_. First 5 rows of the dataset: .. l
surpyval/datasets/__init__.py:52
Functionload_boston_housing
The Boston house-price data of [3]_. This is a well-known data set used in machine learning. It can be analysed with survival analysis m
surpyval/datasets/__init__.py:93
Functionload_g1_kaminskiy_krivtsov
Data on the survival of a repairable system from [4]_. References ---------- .. [4] Kaminskiy, M.P. and Krivtsov, V.V. (2010).
surpyval/datasets/__init__.py:113
Functionload_heart_transplants
Data on the survival of patients who may or may not have received a heart transplant, from [5]_. References ---------- .. [5] Cr
surpyval/datasets/__init__.py:129
Functionload_meeker_lfp
Data on failures of integrated circuits from [12]_. Very difficult for LFP calculations since the data is heavily right censored. R
surpyval/datasets/__init__.py:330
Functionload_mettas_and_zhao
Data on the survival of a repairable system from [7]_. References ---------- .. [7] Mettas, A. and Zhao, Y.Q. (2005). Mod
surpyval/datasets/__init__.py:164
Functionload_rossi_time_varying
Data on the recidivism of released prisoners from [9]_. Includes time varying covariates. References ---------- .. [9] Rossi, P
surpyval/datasets/__init__.py:250
Functionload_sae
Data on failures in automotive industry from [11]_. Features heavily (right) censored data. References ---------- .. [11] V.V.
surpyval/datasets/__init__.py:286
Functionload_tires_data
Data on the survival of tires from [10]_. References ---------- .. [10] Krivtsov, V.V., Tananko, D.E., Davis, T.P. (2002).
surpyval/datasets/__init__.py:270
Methodlog_df
(self, x, alpha, beta)
surpyval/univariate/parametric/distributions/weibull.py:344
Methodlog_df
(self, x, mu, sigma)
surpyval/univariate/parametric/distributions/logistic.py:268
Methodlog_df
(self, x, mu, sigma)
surpyval/univariate/parametric/distributions/lognormal.py:384
Methodlog_df
(self, x, mu, sigma)
surpyval/univariate/parametric/distributions/gumbel.py:290
Methodlog_df
(self, x, alpha, beta)
surpyval/univariate/parametric/distributions/loglogistic.py:309
Methodlog_df
r""" Calculates the log of the density function of the Gamma distribution at x. .. math:: \log f(x) = \log \left
surpyval/univariate/parametric/distributions/gamma.py:413
Methodlog_df
(self, x, mu, sigma)
surpyval/univariate/parametric/distributions/normal.py:388
Methodlog_df
(self, x, failure_rate)
surpyval/univariate/parametric/distributions/exponential.py:379
Methodlog_df
(self, x, alpha, beta, a, b)
surpyval/univariate/parametric/distributions/beta4.py:442
Methodlog_df
(self, x, sigma)
surpyval/univariate/parametric/distributions/rayleigh.py:339
Methodlog_df
(self, x, alpha, beta, mu)
surpyval/univariate/parametric/distributions/expo_weibull.py:311
Methodlog_df
(self, x, mu, sigma)
surpyval/univariate/parametric/distributions/gumbel_lev.py:291
Methodlog_df
(self, x, Z, *params)
surpyval/univariate/regression/proportional_odds/proportional_odds_fitter.py:118
Methodlog_df
(self, x, Z, *params)
surpyval/univariate/regression/proportional_hazards/proportional_hazards_fitter.py:101
Methodlog_df
(self, x, Z, *params)
surpyval/univariate/regression/accelerated_life/parameter_substitution.py:161
Methodlog_ff
(self, x, alpha, beta)
surpyval/univariate/parametric/distributions/weibull.py:356
Methodlog_ff
(self, x, mu, sigma)
surpyval/univariate/parametric/distributions/logistic.py:276
Methodlog_ff
(self, x, mu, sigma)
surpyval/univariate/parametric/distributions/lognormal.py:387
Methodlog_ff
(self, x, mu, sigma)
surpyval/univariate/parametric/distributions/gumbel.py:297
Methodlog_ff
(self, x, alpha, beta)
surpyval/univariate/parametric/distributions/beta.py:381
Methodlog_ff
(self, x, alpha, beta)
surpyval/univariate/parametric/distributions/loglogistic.py:319
Methodlog_ff
(self, x, alpha, beta)
surpyval/univariate/parametric/distributions/gamma.py:447
Methodlog_ff
(self, x, mu, sigma)
surpyval/univariate/parametric/distributions/normal.py:394
Methodlog_ff
(self, x, alpha, beta, a, b)
surpyval/univariate/parametric/distributions/beta4.py:450
Methodlog_ff
(self, x, alpha, beta, mu)
surpyval/univariate/parametric/distributions/expo_weibull.py:321
Methodlog_ff
(self, x, mu, sigma)
surpyval/univariate/parametric/distributions/gumbel_lev.py:288
Methodlog_ff
(self, x, Z, *params)
surpyval/univariate/regression/proportional_odds/proportional_odds_fitter.py:108
Methodlog_ff
(self, x, Z, *params)
surpyval/univariate/regression/proportional_hazards/proportional_hazards_fitter.py:107
Methodlog_ff
(self, x, Z, *params)
surpyval/univariate/regression/accelerated_life/parameter_substitution.py:167
Methodlog_iif
(self, x, *params)
surpyval/recurrent/parametric/crow_amsaa.py:64
Methodlog_iif
(self, x, *params)
surpyval/recurrent/parametric/duane.py:60
Methodlog_iif
Natural logarithm of the instantaneous intensity at ``x``.
surpyval/recurrent/parametric/counting_process.py:38
Methodlog_iif
(self, x, *params)
surpyval/recurrent/parametric/cox_lewis.py:66
Methodlog_like
(beta)
surpyval/univariate/regression/proportional_hazards/cox_ph.py:196
Methodlog_likelihood
(self)
surpyval/recurrent/inference.py:81
Methodlog_sf
(self, x, alpha, beta)
surpyval/univariate/parametric/distributions/weibull.py:353
Methodlog_sf
(self, x, mu, sigma)
surpyval/univariate/parametric/distributions/logistic.py:272
Methodlog_sf
(self, x, mu, sigma)
surpyval/univariate/parametric/distributions/lognormal.py:390
Methodlog_sf
(self, x, mu, sigma)
surpyval/univariate/parametric/distributions/gumbel.py:294
Methodlog_sf
(self, x, alpha, beta)
surpyval/univariate/parametric/distributions/loglogistic.py:316
Methodlog_sf
(self, x, mu, sigma)
surpyval/univariate/parametric/distributions/normal.py:391
Methodlog_sf
(self, x, failure_rate)
surpyval/univariate/parametric/distributions/exponential.py:382
Methodlog_sf
(self, x, sigma)
surpyval/univariate/parametric/distributions/rayleigh.py:342
Methodlog_sf
(self, x, alpha, beta, mu)
surpyval/univariate/parametric/distributions/expo_weibull.py:324
Methodlog_sf
(self, x, mu, sigma)
surpyval/univariate/parametric/distributions/gumbel_lev.py:285
Methodlog_sf
(self, x, Z, *params)
surpyval/univariate/regression/proportional_odds/proportional_odds_fitter.py:98
Methodlog_sf
(self, x, Z, *params)
surpyval/univariate/regression/proportional_hazards/proportional_hazards_fitter.py:104
Methodlog_sf
(self, x, Z, *params)
surpyval/univariate/regression/accelerated_life/parameter_substitution.py:164
Functionlogrank
r""" The k-sample (weighted) log-rank test for the equality of survival distributions of right censored data. At each distinct event time
surpyval/univariate/nonparametric/logrank.py:42
Methodmcf
(self, x, interp="step")
surpyval/recurrent/nonparametric/mcf.py:14
Methodmcf
The mean cumulative function (MCF). For these counting processes the MCF equals the cumulative intensity, so this is a closed-form al
surpyval/recurrent/parametric/parametric_recurrence.py:90
Methodmcf
Cause-specific MCF evaluated at ``x`` for the given ``cause``.
surpyval/recurrent/competing_risks/nonparametric/cause_specific_mcf.py:52
Methodmcf
Estimate the mean cumulative function at ``x`` for covariates ``Z`` by simulating ``items`` time-terminated sequences out to ``max(x)
surpyval/recurrent/regression/proportional_intensity.py:257
Methodmcf_cb
Confidence bounds on the cause-specific MCF for ``cause``.
surpyval/recurrent/competing_risks/nonparametric/cause_specific_mcf.py:56
Methodmean
(self)
surpyval/univariate/parametric/mixture_model.py:229
Methodmean
r""" Mean of the Weibull distribution .. math:: E = \alpha \Gamma \left ( 1 + \frac{1}{\beta} \right ) Paramete
surpyval/univariate/parametric/distributions/weibull.py:279
Methodmean
r""" Mean of the Logistic distribution .. math:: E = \mu Parameters ---------- mu : numpy arra
surpyval/univariate/parametric/distributions/logistic.py:238
Methodmean
r""" Mean of the LogNormal Distribution: .. math:: E = e^{\mu + \frac{\sigma^2}{2}} Parameters --------
surpyval/univariate/parametric/distributions/lognormal.py:292
Methodmean
r""" Calculates the mean of the Gumbel distribution with given parameters. .. math:: E = \mu - \sigma\gamma Whe
surpyval/univariate/parametric/distributions/gumbel.py:256
Methodmean
r""" Mean of the LogLogistic distribution .. math:: E = \frac{\alpha \pi / \beta}{sin \left ( \pi / \beta \right )}
surpyval/univariate/parametric/distributions/loglogistic.py:276
Methodmean
r""" Calculates the mean of the Gamma distribution with given parameters. .. math:: E = \frac{\alpha}{\beta} Pa
surpyval/univariate/parametric/distributions/gamma.py:310
Methodmean
r""" Mean of the Normal distribution .. math:: E = \mu Parameters ---------- mu : numpy array
surpyval/univariate/parametric/distributions/normal.py:296
Methodmean
r""" Mean of the Binomial distribution: .. math:: E[X] = n p Examples -------- >>> from surpyva
surpyval/univariate/parametric/distributions/binomial.py:253
Methodmean
(self, alpha, beta, mu)
surpyval/univariate/parametric/distributions/expo_weibull.py:327
← previousnext →801–900 of 1,523, ranked by callers