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Functions329 in github.com/cusbg/MolArt

⨍ Functions 329◇ Types & classes 18

↓ 1 callersFunctionupdateHeaderPdbIdToActive

src/lm.controller.js:274

↓ 1 callersFunctionupdatePageStructure

* Size of some components might change after the data are loaded, so some sizes (which can't be set as ratio) * need to be updated.

src/index.js:691

↓ 1 callersFunctionvariantsCallbacks

src/pv.controller.js:437

FunctionColorMapper

src/lm.plugin.js:26

FunctionHighlightCustomElements

src/lm.plugin.js:678

src/index.js:349

FunctionOptimizedId

src/lm.plugin.js:922

docs/examples/web/js/index.js:108

examples/web/js/index.js:108

FunctionapplyTheme

(plugin, modelRef, theme)

src/lm.plugin.js:110

FunctionbeautifyGroupName

src/lm.controller.js:17

FunctionclearVisualInteractiveAll

src/lm.controller.js:654

FunctioncolorSelections

(modelId, selColors, idRestrictions = [])

src/lm.plugin.js:614

Methodconstructor

src/lm.controller.js:26

Methodconstructor

(selectionDef, visualDef)

src/lm.controller.js:115

Methodconstructor

src/index.js:38

Methodconstructor

src/index.js:246

Methodconstructor

src/index.js:272

Methodconstructor

src/pdb.mapping.js:12

Methodconstructor

src/pdb.mapping.js:20

Methodconstructor

src/pdb.mapping.js:27

Methodconstructor

src/pdb.mapping.js:38

FunctionconvertPassedRec

src/index.js:890

FunctioncreateGroup

(groupName, groupDesc, entityId)

src/lm.plugin.js:533

FunctioncreateSelectionFromList

src/lm.plugin.js:411

FunctioncreateSelectionFromRange

src/lm.plugin.js:418

FunctioncreateSubSelectionForAFCofidence

(selectionId, tempFactorThrashold)

src/lm.plugin.js:210

FunctioncreateTheme

(model, colorDef)

src/lm.plugin.js:60

FunctioncreateVisual

(entityId, params/*, isUserDefined = false*/, createAfConfidenceVisual=false)

src/lm.plugin.js:334

FunctioncreateVisualsForAFConfidence

(modelId, surfaceVisualId, tempFactorThrashold)

src/lm.plugin.js:222

FunctiondehighlightActivePosition

src/pv.controller.js:429

FunctiondehighlightAll

src/lm.plugin.js:557

FunctiondeselectAllOverlayIcons

src/pv.controller.js:515

Functiondestroy

src/lm.controller.js:941

FunctiondestroyPlugin

src/lm.plugin.js:757

FunctionexportToCsv

src/pv.controller.js:760

MethodexportToPyMol

src/lm.controller.js:120

FunctionfetchAllJson

src/services.js:197

FunctionfocusResidue

(resNum, neighborhoodSize)

src/lm.controller.js:832

FunctionfocusResidue

(modelId, chainId, resNum, neighborhoodSize)

src/lm.plugin.js:581

FunctionfocusSelection

src/lm.plugin.js:307

FunctiongetAfCifURL

src/services.js:152

FunctiongetAuthSeqNumber

src/lm.controller.js:906

FunctiongetAuthSeqNumber

(modelId, chainId, resNum)

src/lm.plugin.js:786

FunctiongetAuthSeqNumberRange

(rec, resNumBegin, resNumEnd)

src/lm.controller.js:912

FunctiongetAuthSeqNumberRange

(modelId, chainId, resNumBegin, resNumEnd)

src/lm.plugin.js:801

FunctiongetController

src/lm.plugin.js:829

FunctiongetCoordinatesFile

src/pdb.mapping.js:180

FunctiongetEntity

src/lm.plugin.js:407

FunctiongetFastaByUniprotId

src/services.js:18

MethodgetInteractiveHighlightsGroupId

src/lm.controller.js:64

FunctiongetLiteMol

src/lm.plugin.js:833

FunctiongetObservedRanges

(pdbId, chainId)

src/services.js:31

FunctiongetObservedRangesAPI

(pdbId, chainId)

src/services.js:26

FunctiongetPredictProtein

src/services.js:162

MethodgetSelectionGroupId

src/lm.controller.js:72

FunctiongetSeqRangeFromObservedRange

src/pdb.mapping.js:185

FunctiongetSeqStrRange

src/pv.controller.js:671

FunctiongetStyleDefinition

(type, params, color, alpha)

src/lm.plugin.js:323

FunctiongetTrackData

(trackContainer)

src/pv.controller.js:333

FunctiongetUniprotSegments

src/services.js:130

FunctiongetUnpToAfMapping

src/services.js:157

FunctiongetUnpToPdbMapping

src/services.js:22

FunctiongetUnpToSmrMapping

src/services.js:136

MethodgetUserHighlightSelectionIds

src/lm.controller.js:96

FunctiongetVisualsInteractive

src/lm.controller.js:666

FunctiongroupSelected

src/lm.controller.js:924

FunctionhideEntityIfInHiddenModel

src/lm.plugin.js:485

FunctionhideErrorMessage

src/lm.controller.js:866

FunctionhideErrorMessage

src/index.js:703

FunctionhideModelsExcept

(modelIdsToShow)

src/lm.plugin.js:268

FunctionhideSelectionVisual

src/lm.plugin.js:519

FunctionhighlightActivePosition

src/pv.controller.js:416

FunctionhighlightCallBack

src/lm.controller.js:370

FunctionhighlightRegion

(seqBegin, seqEnd)

src/lm.controller.js:823

FunctionhighlightResidue

src/lm.controller.js:797

FunctionhighlightResidue

(modelId, chainId, resNum)

src/lm.plugin.js:570

FunctionidMatch

(pdbId, chainId)

src/pdb.mapping.js:379

Functioninitialize

src/lm.controller.js:928

Functioninitialize

src/pv.controller.js:22

FunctioninitializePlugin

src/lm.plugin.js:673

FunctionisInObservedRanges

src/pdb.mapping.js:352

src/pdb.mapping.js:181

FunctionisValidPdbPos

src/pdb.mapping.js:363

FunctionisValidPdbRegion

src/pdb.mapping.js:371

docs/examples/web/js/semantic.min.js:11

examples/web/js/semantic.min.js:11

FunctionloadMolecule

(pdbId, source, dataFormat, url, tempFactorThrashold)

src/lm.plugin.js:170

FunctionloadRecord

(rec, params = {focus: true, hideOthers: true})

src/lm.controller.js:462

FunctionmapFeatures

(features, colors)

src/lm.controller.js:670

FunctionmapPosPdbToUnp

src/pdb.mapping.js:348

FunctionmapPosUnpToPdb

src/pdb.mapping.js:344

FunctionmodifyHtmlStructure

src/pv.controller.js:261

FunctionmoleculeLoaded

src/lm.controller.js:852

FunctionmoleculeLoaded

src/lm.plugin.js:763

FunctionparseUniprotRanges

(json, uniprotId)

src/pdb.mapping.js:274

FunctionpdbChainListOnChange

src/lm.controller.js:332

FunctionpdbMapping

(record, _source = 'PDB')

src/pdb.mapping.js:46

FunctionpromiseAll

src/services.js:172

FunctionrangeMousemove

src/lib/semantic-ui-range/range.js:163

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