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Functions329 in github.com/cusbg/MolArt

⨍ Functions 329◇ Types & classes 18

↓ 23 callersFunctionselectNodes

src/lm.plugin.js:165

↓ 21 callersFunctioncontrollerAvailability

src/lm.plugin.js:161

↓ 21 callersMethodset

(features, colors)

src/index.js:252

↓ 13 callersMethodgetPdbRecord

src/lm.controller.js:40

↓ 13 callersFunctiont

docs/examples/web/js/semantic.min.js:11

↓ 13 callersFunctiont

examples/web/js/semantic.min.js:11

↓ 10 callersMethodgetModelId

src/lm.controller.js:48

↓ 9 callersFunctionn

docs/examples/web/js/semantic.min.js:11

↓ 9 callersFunctionn

examples/web/js/semantic.min.js:11

↓ 7 callersFunctionajaxQuery

src/services.js:7

↓ 7 callersFunctiongetHeaderPdbChainList

src/lm.controller.js:206

↓ 7 callersFunctiongetPdbStart

src/pdb.mapping.js:171

↓ 6 callersFunctiongetHeaderPdbIdList

src/lm.controller.js:202

↓ 6 callersFunctionhideEntity

src/lm.plugin.js:479

↓ 6 callersFunctionlmGetColors

(pdbId, chainId, pdbStart, pdbEnd)

test/spec.js:146

↓ 6 callersMethodoverlay

src/index.js:265

↓ 5 callersFunctionchangeEntityVisibility

(entityId, visible)

src/lm.plugin.js:471

↓ 5 callersFunctiongetCategories

src/pv.controller.js:667

↓ 5 callersFunctiongetHeaderPdbId

src/lm.controller.js:218

↓ 5 callersFunctiongetPdbEnd

src/pdb.mapping.js:172

↓ 5 callersFunctiongetPlugin

src/pv.controller.js:787

↓ 5 callersFunctiongetUnpStart

src/pdb.mapping.js:173

↓ 5 callersFunctioninitPlugin

(done, uniprotId, parameters)

test/spec.js:13

↓ 5 callersFunctionmodSequence

(entityId, asymId, startId, endId, includeHet)

src/lm.plugin.js:879

↓ 5 callersMethodunset

src/index.js:258

↓ 4 callersFunctionclearPlugin

test/spec.js:39

↓ 4 callersFunctiongetChainId

src/pdb.mapping.js:165

↓ 4 callersFunctionresize

(checkPvReady = true)

src/index.js:662

↓ 4 callersFunctionupdateHeaderChainIds

* Fills dropdown with pdb chains to chains of currently selected pdb record and selects * the chain, which should be active or the first chain in

src/lm.controller.js:169

↓ 3 callersFunctioncntStructureInsertedPosBefore

src/pdb.mapping.js:330

↓ 3 callersFunctiongetActiveStructurePdbNum

test/spec.js:58

↓ 3 callersFunctiongetHeaderUserHighlightsList

src/lm.controller.js:210

↓ 3 callersFunctiongetObservedRanges

src/pdb.mapping.js:177

↓ 3 callersFunctiongetPdbId

src/pdb.mapping.js:164

↓ 3 callersFunctionhandleAfConfidence

src/lm.controller.js:420

↓ 3 callersMethodisSet

src/index.js:98

↓ 3 callersFunctionlmGetVisuals

test/spec.js:112

↓ 2 callersFunctionactivateDropdownsEvents

src/lm.controller.js:237

↓ 2 callersFunctionactivateTab

docs/examples/web/js/index.js:100

↓ 2 callersFunctionactivateTab

examples/web/js/index.js:100

↓ 2 callersFunctionadjustContainerDimensions

(pluginContainer)

docs/examples/web/js/index.js:81

↓ 2 callersFunctionadjustContainerDimensions

(pluginContainer)

examples/web/js/index.js:81

↓ 2 callersFunctionajaxQuery

docs/examples/web/js/index.js:1

↓ 2 callersFunctionajaxQuery

examples/web/js/index.js:1

↓ 2 callersFunctionbs_reload

↓ 2 callersFunctionc

docs/examples/web/js/semantic.min.js:11

↓ 2 callersFunctionc

examples/web/js/semantic.min.js:11

↓ 2 callersFunctioncolorRegions

src/lm.controller.js:681

↓ 2 callersFunctionconsistencyTesting

test/spec.js:185

↓ 2 callersFunctioncreateMockServer

test/spec.js:43

↓ 2 callersFunctioncreateSelection

src/lm.plugin.js:427

↓ 2 callersFunctionextractObservedResidues

src/lm.controller.js:451

↓ 2 callersFunctiongetDefaultSurfaceVis

src/lm.plugin.js:313

↓ 2 callersFunctiongetExperimentalMethod

src/pdb.mapping.js:167

↓ 2 callersFunctiongetHeaderChainId

src/lm.controller.js:223

↓ 2 callersFunctiongetHighlightBar

src/pv.controller.js:412

↓ 2 callersFunctiongetInteractiveSelectionId

(recId, visualId)

src/lm.controller.js:615

↓ 2 callersFunctiongetLength

src/pdb.mapping.js:170

↓ 2 callersFunctiongetPdbChains

src/lm.controller.js:154

↓ 2 callersMethodgetSelectionId

src/lm.controller.js:56

↓ 2 callersFunctiongetSource

src/pdb.mapping.js:179

↓ 2 callersFunctiongetTrack

* For a track defined by its SVG container, retrieve its data and and color * @param svg SVG container keeping the track data.

src/pv.controller.js:579

↓ 2 callersFunctiongetUnpEnd

src/pdb.mapping.js:174

↓ 2 callersMethodgetUserHighlightVisualIds

src/lm.controller.js:88

↓ 2 callersFunctiongetVariantsLinksSelectors

src/pv.controller.js:433

↓ 2 callersFunctiongetVisualId

src/lm.plugin.js:598

↓ 2 callersFunctionheaderMatch

(pdbId, chainId)

test/spec.js:521

↓ 2 callersFunctionheaderShouldMatchActiveStructure

test/spec.js:164

↓ 2 callersFunctionheaderShouldMatchStructure

(pdbId, chainId)

test/spec.js:168

↓ 2 callersFunctionhex2rgb

src/pv.controller.js:519

↓ 2 callersFunctionhideLoadingIcon

src/index.js:312

↓ 2 callersFunctionimpute

(sourceCss, targetCss)

↓ 2 callersFunctioninitializeTestDataSet

(sequence, catName)

test/spec.js:197

↓ 2 callersFunctionisSelected

src/pv.controller.js:828

↓ 2 callersFunctionisVariationIcon

(e, categoryClass)

src/pv.controller.js:824

↓ 2 callersFunctionlmGetModel

test/spec.js:81

↓ 2 callersFunctionlmGetResidueColors

(pdbId, chainId, resId)

test/spec.js:121

↓ 2 callersFunctionloadAf

(uniprotId, opts)

src/index.js:737

↓ 2 callersFunctionloadSmr

(uniprotId, opts)

src/index.js:718

↓ 2 callersFunctionmapPosStructToUnp

src/pdb.mapping.js:367

↓ 2 callersFunctiononPvReady

src/index.js:1082

↓ 2 callersMethodoverlay

src/index.js:294

↓ 2 callersFunctionpositionHeadersAndContainersTop

src/index.js:647

↓ 2 callersFunctionremoveClass

(elements, className)

src/pv.controller.js:508

↓ 2 callersFunctionrgbToString

test/spec.js:142

↓ 2 callersFunctionsetSurfaceTransparency

src/lm.controller.js:856

↓ 2 callersFunctionsetUserSelectionsVisibiliy

src/lm.controller.js:741

↓ 2 callersFunctionshiftActiveStructure

src/lm.controller.js:311

↓ 2 callersFunctionshiftObservedRangeToFitMapping

src/pdb.mapping.js:217

↓ 2 callersFunctionshowEntity

(entityId, showConfident = true)

src/lm.plugin.js:491

↓ 2 callersFunctionuniquifyArray

src/lm.controller.js:137

↓ 2 callersFunctionupdateActiveStructureFromHeader

src/lm.controller.js:387

↓ 2 callersFunctionupdateHeaderPdbLink

src/lm.controller.js:288

↓ 2 callersFunctionupdateSurfaceTransparencyTitle

src/lm.controller.js:344

↓ 2 callersFunctionuserHighlightSelected

src/lm.controller.js:214

↓ 1 callersFunctionLmController

src/lm.controller.js:21

↓ 1 callersFunctionPvController

src/pv.controller.js:11

↓ 1 callersFunctionactiveStructureShouldBeHighlighted

test/spec.js:176

↓ 1 callersFunctionaddVariationIcon

src/pv.controller.js:316

↓ 1 callersFunctioncapitalize

src/lm.controller.js:13

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