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841 symbols 2,141 edges 91 files 4 documented · 0% ● updated 3y ago★ 602 open issues

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⨍ Functions 701◇ Types & classes 140

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Core symbols most depended-on inside this repo

↓ 20 filesSeqParser

SeqParser parse both FASTA and FASTQ formats

bigseqkit-lib/helper.go

↓ 23 filesignisDriver

bigseqkit-cli/helper.go

↓ 23 filesaddCommand

bigseqkit-cli/helper.go

↓ 22 filesparseSeqKitConfig

bigseqkit-cli/helper.go

↓ 22 filescheck

bigseqkit-cli/helper.go

↓ 21 filesSeqKitConfig

bigseqkit-py/bigseqkit/helper.py

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Method 475

Function 226

Struct 94

Class 43

TypeAlias 3

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Go65%

Python35%

Modules by API surface

bigseqkit-py/bigseqkit/seq.py27 symbols

bigseqkit/seq.go24 symbols

bigseqkit-py/bigseqkit/helper.py24 symbols

bigseqkit-cli/helper.go24 symbols

bigseqkit/helper.go23 symbols

bigseqkit-lib/sort.go23 symbols

bigseqkit-py/bigseqkit/locate.py22 symbols

bigseqkit-py/bigseqkit/grep.py22 symbols

bigseqkit-lib/helper.go21 symbols

bigseqkit/grep.go20 symbols

bigseqkit/locate.go19 symbols

bigseqkit-lib/faidx.go19 symbols

For agents

$ claude mcp add BigSeqKit \
  -- python -m otcore.mcp_server <graph>

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github.com/citiususc/BigSeqKit @main

Core symbols most depended-on inside this repo

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