Types & classes — github.com/ccsb-scripps/AutoDock-Vina

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Types & classes130 in github.com/ccsb-scripps/AutoDock-Vina

⨍ Functions 753◇ Types & classes 130

↓ 31 callersClasspdbqt_parse_error

src/lib/parse_error.h:29

↓ 21 callersClassvina_runtime_error

src/lib/vina.h:57

↓ 11 callersClassvec

src/lib/common.h:57

↓ 5 callersClassfile_error

src/lib/file.h:29

↓ 4 callersClassatom_reference

src/lib/parse_pdbqt.cpp:116

↓ 4 callersClassbad_conversion

src/lib/convert_substring.h:30

↓ 4 callersClassinteracting_pair

src/lib/model.h:35

↓ 3 callersClassatom_index

src/lib/atom.h:28

↓ 2 callersClassbond

src/lib/atom.h:46

↓ 2 callersClassprecalculate_element

src/lib/precalculate.h:33

↓ 1 callersClassPDBQT

example/autodock_scripts/zinc_pseudo.py:49

↓ 1 callersClassVina

src/lib/vina.h:70

↓ 1 callersClassaux

src/lib/parallel.h:74

↓ 1 callersClassfirst_segment

src/lib/tree.h:136

↓ 1 callersClassligand

src/lib/model.h:47

↓ 1 callersClassmodel

src/split/split.cpp:54

↓ 1 callersClassmovable_atom

src/lib/parse_pdbqt.cpp:122

↓ 1 callersClassnum_ligands

src/lib/conf_independent.h:90

↓ 1 callersClassparsing_struct

src/lib/parse_pdbqt.cpp:153

↓ 1 callersClassrigid_body

src/lib/tree.h:83

↓ 1 callersClasssegment

src/lib/tree.h:111

↓ 1 callersClassstat

src/lib/utils.cpp:84

↓ 1 callersClassznShell

Process closest atoms to get coordination sphere Init with parameters, and call PROCESS to the current init

example/autodock_scripts/zinc_pseudo.py:206

ClassConfIndependent

Conf independent

src/lib/conf_independent.h:55

src/lib/potentials.h:125

ClassScoringFunction

src/lib/scoring_function.h:39

Classacceptor_kind

src/lib/atom_constants.h:200

Classad4_electrostatic

src/lib/potentials.h:356

src/lib/potentials.h:460

Classad4_solvation

src/lib/potentials.h:380

Classad4_tors_add

src/lib/conf_independent.h:119

src/lib/potentials.h:427

src/lib/ad4cache.h:43

src/lib/model.cpp:99

Classappender_info

src/lib/model.cpp:91

src/lib/array3d.h:42

src/lib/atom.h:62

src/lib/atom_base.h:28

Classatom_equivalence

src/lib/atom_constants.h:189

Classatom_frame

src/lib/tree.h:65

src/lib/atom_constants.h:135

Classatom_range

src/lib/tree.h:53

src/lib/atom_type.h:29

src/lib/parallel.h:133

src/lib/parallel.h:167

Classaxis_frame

src/lib/tree.h:97

src/lib/model.cpp:310

src/lib/model.cpp:286

Classbranch_metrics

src/lib/model.cpp:41

src/lib/cache.h:45

src/lib/model.h:62

src/lib/conf.h:214

src/lib/conf.h:275

Classconf_independent_inputs

src/lib/conf_independent.h:34

src/lib/conf.h:38

Enumdistance_type

src/lib/model.h:59

src/lib/tree.h:29

src/lib/grid.h:32

src/lib/grid_dim.h:30

Classheterotree

Node == first_segment || rigid_body

src/lib/tree.h:187

src/lib/file.h:35

src/lib/igrid.h:30

Classincrementable

src/lib/incrementable.h:26

Classinternal_error

src/lib/common.h:189

Classligand_change

src/lib/conf.h:148

Classligand_conf

src/lib/conf.h:157

Classligand_length

src/lib/conf_independent.h:83

Classlinearattraction

Macrocycle - Vina and AD42

src/lib/potentials.h:495

src/lib/common.h:148

src/lib/matrix.h:37

Forward declaration

src/lib/conf_independent.h:32

Forward declaration

src/lib/scoring_function.h:35

src/lib/igrid.h:28

Forward declaration

src/lib/precalculate.h:31

src/lib/cache.h:43

src/lib/model.h:70

Classmonte_carlo

src/lib/monte_carlo.h:29

T == parsing_struct

src/lib/parse_pdbqt.cpp:156

src/lib/non_cache.h:30

Classnon_rigid_parsed

src/lib/parse_pdbqt.cpp:135

Classnum_heavy_atoms

src/lib/conf_independent.h:104

Classnum_heavy_atoms_div

src/lib/conf_independent.h:97

Classnum_hydrophobic_atoms

src/lib/conf_independent.h:111

Classnum_tors_div

src/lib/conf_independent.h:76

Classnum_tors_sqr

src/lib/conf_independent.h:62

Classnum_tors_sqrt

src/lib/conf_independent.h:69

src/lib/file.h:46

Classoptions_occurrence

src/main/main.cpp:40

Classoutput_type

src/lib/conf.h:358

Classparallel_for

src/lib/parallel.h:37

Classparallel_for<F, true>

src/lib/parallel.h:99

Classparallel_iter

src/lib/parallel.h:160

Classparallel_mc

src/lib/parallel_mc.h:28

Classparallel_mc_aux

src/lib/parallel_mc.cpp:37

Classparallel_mc_task

src/lib/parallel_mc.cpp:28

Classparallel_progress

src/lib/parallel_progress.h:40

Classparsed_atom

src/lib/parse_pdbqt.cpp:43

Classpdbqt_initializer

/////// new stuff //////////////////

src/lib/parse_pdbqt.cpp:568

Classpdbqt_initializer

forward declaration

src/lib/model.h:64

Classprecalculate

src/lib/precalculate.h:124

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