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Functions633 in github.com/ccsb-scripps/AutoDock-GPU

↓ 258 callersMethodsize
\brief Returns the size of the object in bytes based on the runtime number of dimensions
windows/include/CL/cl2.hpp:5542
↓ 231 callersFunctionsetKernelArg
wrapcl/src/Kernels.cpp:308
↓ 197 callersFunctionerrHandler
windows/include/CL/cl2.hpp:707
↓ 152 callersFunctionerrHandler
windows/include/CL/cl.hpp:325
↓ 102 callersMethodsize
windows/include/CL/cl.hpp:4797
↓ 80 callersFunctionargcmp
host/src/getparameters.cpp:1357
↓ 29 callersFunctiongetInfo
windows/include/CL/cl2.hpp:1367
↓ 24 callersFunctiongetInfo
windows/include/CL/cl.hpp:1565
↓ 21 callersFunctionmallocBufferObject
wrapcl/src/BufferObjects.cpp:28
↓ 15 callersFunctionmemcopyBufferObjectToDevice
wrapcl/src/BufferObjects.cpp:213
↓ 10 callersMethodend
windows/include/CL/cl.hpp:949
↓ 10 callersFunctionstricmp
This was disabled for Windows
host/src/miscellaneous.cpp:510
↓ 9 callersMethodbegin
windows/include/CL/cl.hpp:942
↓ 8 callersFunctionhas_absolute_path
host/src/miscellaneous.cpp:272
↓ 8 callersFunctionmemcopyBufferObjectFromDevice
wrapcl/src/BufferObjects.cpp:234
↓ 8 callersFunctionrunKernel1D
wrapcl/src/Kernels.cpp:325
↓ 8 callersFunctionseconds_since
host/src/main.cpp:60
↓ 7 callersFunctioncreateKernel
wrapcl/src/Kernels.cpp:29
↓ 7 callersFunctionmove_ligand
host/src/processligand.cpp:1389
↓ 7 callersFunctionrange_trim_to_char
trim input string range -- careful: no range checking
host/inc/miscellaneous.h:110
↓ 7 callersFunctionstart_timer
host/src/main.cpp:77
↓ 6 callersFunctionfence
windows/include/CL/cl.hpp:1076
↓ 6 callersMethodget
windows/include/CL/cl2.hpp:1652
↓ 6 callersFunctionget_gridinfo
host/src/processgrid.cpp:28
↓ 6 callersFunctionprint_options
host/src/getparameters.cpp:1254
↓ 6 callersFunctionsize
\brief Queries the length of the string, excluding any added '\0's.
windows/include/CL/cl.hpp:641
↓ 5 callersFunctionbuildErrHandler
windows/include/CL/cl2.hpp:1849
↓ 5 callersFunctionis_H_acceptor
host/src/processligand.cpp:1512
↓ 5 callersMethodrandom_float
host/inc/miscellaneous.h:222
↓ 5 callersFunctionscale_ligand
host/src/processligand.cpp:1423
↓ 5 callersFunctionstrincmp
host/src/miscellaneous.cpp:549
↓ 4 callersFunctioncalc_intraE_f
Corrected host "calc_intraE_f" function after smoothing was added
host/src/processligand.cpp:2058
↓ 4 callersFunctiondistance2
host/src/miscellaneous.cpp:107
↓ 4 callersMethoderr
! \brief Get error code associated with exception * * \return The error code. */
windows/include/CL/cl2.hpp:696
↓ 4 callersFunctionget_filepath
host/src/miscellaneous.cpp:293
↓ 4 callersFunctionis_dirname
host/src/miscellaneous.cpp:262
↓ 4 callersFunctionligand_calc_output
host/src/processresult.cpp:538
↓ 4 callersFunctionread_receptor
host/src/getparameters.cpp:2243
↓ 4 callersFunctiontrim
trim from both ends (in place)
host/src/getparameters.cpp:51
↓ 3 callersFunctionadd_deriv_atype
host/inc/getparameters.h:147
↓ 3 callersFunctioncalc_interE_f
host/src/processligand.cpp:1796
↓ 3 callersFunctioncalc_rmsd
host/src/processligand.cpp:1441
↓ 3 callersFunctionclear
! \brief Empties the vector of all elements. * \note * This does not deallocate memory but will invoke destructors * on contained el
windows/include/CL/cl.hpp:715
↓ 3 callersFunctioncopy
windows/include/CL/cl2.hpp:8706
↓ 3 callersFunctioncopy
windows/include/CL/cl.hpp:6822
↓ 3 callersMethoddimensions
\brief Queries the number of dimensions in the range.
windows/include/CL/cl2.hpp:5535
↓ 3 callersMethoddimensions
\brief Queries the number of dimensions in the range.
windows/include/CL/cl.hpp:4780
↓ 3 callersFunctiondistance
host/src/miscellaneous.cpp:95
↓ 3 callersFunctionelapsed_seconds
host/src/performdocking.cpp:392
↓ 3 callersMethodenqueueMapSVM
windows/include/CL/cl2.hpp:7538
↓ 3 callersMethodenqueueUnmapSVM
windows/include/CL/cl2.hpp:7643
↓ 3 callersFunctionfilelist_add
host/src/getparameters.cpp:852
↓ 3 callersFunctiongetInfoHelper
windows/include/CL/cl2.hpp:875
↓ 3 callersFunctiongetInfoHelper
windows/include/CL/cl.hpp:1131
↓ 3 callersFunctionget_filenames_and_ADcoeffs
host/src/getparameters.cpp:1162
↓ 3 callersFunctionget_moving_and_unit_vectors
host/src/processligand.cpp:1068
↓ 3 callersFunctionget_movvec_to_origo
host/src/processligand.cpp:1363
↓ 3 callersFunctionis_H_bond
host/src/processligand.cpp:1521
↓ 3 callersFunctionis_mod_pair
host/src/processligand.cpp:735
↓ 2 callersFunctionanalyze_ligand_receptor
host/src/processligand.cpp:1677
↓ 2 callersFunctionassign
windows/include/CL/cl.hpp:894
↓ 2 callersFunctionbegin
windows/include/CL/cl.hpp:999
↓ 2 callersFunctionchange_conform
host/src/processligand.cpp:1607
↓ 2 callersFunctioncheck_progress
host/src/performdocking.cpp:1686
↓ 2 callersFunctionend
windows/include/CL/cl.hpp:1009
↓ 2 callersMethodenqueueMapBuffer
windows/include/CL/cl2.hpp:7470
↓ 2 callersMethodenqueueMapBuffer
windows/include/CL/cl.hpp:6144
↓ 2 callersFunctionenqueueMapSVM
windows/include/CL/cl2.hpp:8519
↓ 2 callersMethodenqueueNDRangeKernel
windows/include/CL/cl2.hpp:7813
↓ 2 callersMethodenqueueUnmapMemObject
windows/include/CL/cl2.hpp:7615
↓ 2 callersMethodenqueueUnmapMemObject
windows/include/CL/cl.hpp:6205
↓ 2 callersMethodeval
Input: genes Output: score
input/1ac8/derived/eval.py:49
↓ 2 callersFunctiongen_new_pdbfile
host/src/processligand.cpp:1323
↓ 2 callersFunctiongetContextPlatformVersion
windows/include/CL/cl2.hpp:1571
↓ 2 callersFunctiongetContextPlatformVersion
windows/include/CL/cl.hpp:1767
↓ 2 callersFunctiongetDevicePlatformVersion
windows/include/CL/cl2.hpp:1564
↓ 2 callersFunctiongetDevicePlatformVersion
windows/include/CL/cl.hpp:1759
↓ 2 callersFunctiongetDevices
wrapcl/src/Devices.cpp:28
↓ 2 callersMethodgetInfo
windows/include/CL/cl2.hpp:6504
↓ 2 callersFunctiongetKernelInfo
wrapcl/src/Kernels.cpp:69
↓ 2 callersFunctiongetKernelWorkGroupInfo
wrapcl/src/Kernels.cpp:194
↓ 2 callersFunctiongetPlatforms
wrapcl/src/Platforms.cpp:28
↓ 2 callersFunctiongetProgramInfo
wrapcl/src/Programs.cpp:29
↓ 2 callersFunctiongetprogramBuildInfo
wrapcl/src/Programs.cpp:237
↓ 2 callersFunctioninit_liganddata
host/src/processligand.cpp:40
↓ 2 callersFunctionmake_reqrot_ordering
host/src/calcenergy.cpp:349
↓ 2 callersFunctionmemMap
wrapcl/src/BufferObjects.cpp:287
↓ 2 callersFunctionparse_dpf
host/src/getparameters.cpp:135
↓ 2 callersFunctionparse_liganddata
host/src/processligand.cpp:1124
↓ 2 callersFunctionprocessid
host/inc/miscellaneous.h:41
↓ 2 callersFunctionpush_back
! \brief Appends an element after the last valid element. * Calling this on a vector that has reached capacity will throw an * exception if
windows/include/CL/cl.hpp:726
↓ 2 callersFunctionread_receptor_atoms
host/src/getparameters.cpp:2175
↓ 2 callersFunctionread_xml_genomes
host/src/getparameters.cpp:2406
↓ 2 callersMethodretain
windows/include/CL/cl.hpp:1851
↓ 2 callersFunctionrotate
host/src/miscellaneous.cpp:150
↓ 2 callersMethodsetArg
windows/include/CL/cl2.hpp:5775
↓ 2 callersMethodsetSVMPointers
! * Specify a vector of SVM pointers that the kernel may access in * addition to its arguments. */
windows/include/CL/cl2.hpp:5831
↓ 2 callersFunctionsetup_gpu_for_docking
host/src/performdocking.cpp:135
↓ 2 callersFunctionstrndup
host/inc/miscellaneous.h:143
↓ 2 callersFunctionunmemMap
wrapcl/src/BufferObjects.cpp:323
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