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Types & classes21 in github.com/brentp/vcfgo

⨍ Functions 146◇ Types & classes 21

TypeAliasBadVcfSuite

header_test.go:70

1 2827694 rs2376870 CGTGGATGCGGGGAC C . PASS SVTYPE=DEL;END=2827762;HOMLEN=1;HOMSEQ=G;SVLEN=-68 GT:GQ 1/1:13.9

Header holds all the type and format information for the variants.

StructHeaderSuite

header_test.go:65

Info holds the Info and Format fields

StructInfoSuite

StructInternalSuite

internal_test.go:5

Reader holds information about the current line number (for errors) and The VCF header that indicates the structure of records.

StructReaderSuite

reader_test.go:13

StructRegressionSuite

regression_test.go:34

StructSVLENNumberASuite

TypeAliasSampleFormat

SampleFormat holds the type info for Format fields.

StructSampleGenotype

SampleGenotype holds the information about a sample. Several fields are pre-parsed, but all fields are kept in Fields as well.

StructSampleSuite

sample_test.go:24

StructSplitAltSuite

splitalts_test.go:5

VCFError satisfies the error interface and allows multiple errors. This is useful because, for example, on a single line, every sample may have a fiel

Variant holds the information about a single site. It is analagous to a row in a VCF file.

StructVariantSuite

variant_test.go:13

Writer allows writing VCF files.