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Functions8,648 in github.com/bio2rdf/bio2rdf-scripts

↓ 4 callersMethodstripComments
Returns the given string, with comments removed @param src the source string @param stringOpens characters which delimit the "o
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/StringUtils.java:1778
↓ 4 callersMethodtestBug62577TestUrl
(String url)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/testsuite/regression/ConnectionRegressionTest.java:6405
↓ 4 callersMethodtestBug65871_testCatalogs
(Connection conn1)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/testsuite/regression/MetaDataRegressionTest.java:3265
↓ 4 callersMethodtestBug65871_testTable
(String unquotedDbName, String quotedDbName, String unquotedTableName, String quotedTableName, Connection conn
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/testsuite/regression/MetaDataRegressionTest.java:3324
↓ 4 callersMethodtestBug71396PrepStatementClose
Closes all PreparedStatements in the array.
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/testsuite/regression/StatementRegressionTest.java:6648
↓ 4 callersMethodtestBug71396PrepStatementInit
Initializes and returns an array of PreparedStatements, with maxRows defined, for a set of queries.
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/testsuite/regression/StatementRegressionTest.java:6633
↓ 4 callersMethodtestBug71672PreparedStatement
Check the update count and returned keys for an INSERT query using a PreparedStatement object. If expectedUpdateCount < 0 then runs PreparedStatement.
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/testsuite/regression/StatementRegressionTest.java:7083
↓ 4 callersMethodtestBug71672Statement
Check the update count and returned keys for an INSERT query using a Statement object. If expectedUpdateCount < 0 then runs Statement.execute() otherw
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/testsuite/regression/StatementRegressionTest.java:7060
↓ 4 callersMethoduseUnbufferedInput
@return Returns the useUnbufferedInput.
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ConnectionProperties.java:967
↓ 4 callersMethodxorString
Encrypt/Decrypt function used for password encryption in authentication Simple XOR is used here but it is OK as we crypt random strings @param from
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/Security.java:222
↓ 3 callersMethodAddCategory
(&$x, $id, $list_name, $item_name, $predicate, $list_item_name = null)
drugbank/drugbank.php:743
↓ 3 callersMethodaddSlaveHost
(String groupFilter, String host)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/jmx/ReplicationGroupManagerMBean.java:30
↓ 3 callersMethodaddToHistogram
(int[] histogramCounts, long[] histogramBreakpoints, long value, int numberOfTimes, long currentLowerBound,
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ConnectionImpl.java:874
↓ 3 callersMethodasSql
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/PreparedStatement.java:915
↓ 3 callersMethodavailable
@see java.io.InputStream#available()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/CompressedInputStream.java:85
↓ 3 callersMethodbind
(SocketAddress bindpoint)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/testsuite/regression/ConnectionRegressionTest.java:6676
↓ 3 callersMethodbytesAreSame
(byte[] byte1, byte[] byte2)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/testsuite/simple/CharsetTest.java:410
↓ 3 callersMethodchangeDatabaseTo
(String database)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/MysqlIO.java:1886
↓ 3 callersMethodcheck
(defaults,args)
toxkb/outdated_gems/rdfextraction/lib/initparam.rb:6
↓ 3 callersMethodcheckBounds
(int paramIndex, int parameterIndexOffset)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/PreparedStatement.java:3385
↓ 3 callersMethodcheckConfidentiality
Check if given plugin requires confidentiality, but connection is without SSL @param plugin @throws SQLException
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/MysqlIO.java:1546
↓ 3 callersMethodcheckForIntegerTruncation
(int columnIndex, byte[] valueAsBytes, int intValue)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ResultSetImpl.java:6379
↓ 3 callersMethodcheckIsOutputParam
(int paramIndex)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/CallableStatement.java:624
↓ 3 callersMethodcheckOpenResultsFor44056
(Statement newStmt)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/testsuite/regression/StatementRegressionTest.java:5242
↓ 3 callersMethodcheckPacketSequencing
@param multiPacketSeq @throws CommunicationsException
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/MysqlIO.java:3547
↓ 3 callersMethodcheckPingQuery
(Connection c)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/testsuite/regression/ConnectionRegressionTest.java:1971
↓ 3 callersMethodcheckStreamability
Checks whether or not this statement is supposed to be providing streamable result sets...If output parameters are registered, the driver can not stre
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/CallableStatement.java:687
↓ 3 callersMethodcheckUpdatability
Is this ResultSet updateable? @throws SQLException
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/UpdatableResultSet.java:223
↓ 3 callersMethodcheckUpdatabilityMessage
(SQLException sqlEx, String messageToCheck)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/testsuite/regression/ResultSetRegressionTest.java:3605
↓ 3 callersMethodchecksumMD5
MD5 version of the "H()" function from rfc2617.
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/fabric/proto/xmlrpc/DigestAuthentication.java:85
↓ 3 callersMethodclearNextResult
Clears the reference to the next result set in a multi-result set "chain".
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ResultSetInternalMethods.java:134
↓ 3 callersMethodclientPrepareStatement
@param sql @throws SQLException
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ConnectionImpl.java:1406
↓ 3 callersMethodclose
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ReplicationConnection.java:236
↓ 3 callersMethodcloseConnectionProxy
(LoadBalancingConnectionProxy proxy)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ConnectionGroup.java:179
↓ 3 callersMethodconsistentToString
Takes care of the fact that Sun changed the output of BigDecimal.toString() between JDK-1.4 and JDK 5 @param decimal the big decimal to st
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/StringUtils.java:172
↓ 3 callersMethodconvertToZeroLiteralStringWithEmptyCheck
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ResultSetImpl.java:854
↓ 3 callersMethodcopy
Returns a new instance of this result set, that shares the underlying row data.
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ResultSetInternalMethods.java:41
↓ 3 callersMethodcreateArrayOf
(String typeName, Object[] elements)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/JDBC4MySQLConnection.java:44
↓ 3 callersMethodcreateBlob
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/JDBC4MySQLConnection.java:62
↓ 3 callersMethodcreateCalendarIfNeeded
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ResultSetImpl.java:498
↓ 3 callersMethodcreateClob
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/JDBC4MySQLConnection.java:64
↓ 3 callersMethodcreateDatabase
(String databaseName)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/testsuite/BaseTestCase.java:201
↓ 3 callersMethodcreatePrimaryConnection
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/FailoverConnectionProxy.java:135
↓ 3 callersMethodcreateSQLXML
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/JDBC4MySQLConnection.java:42
↓ 3 callersMethodcreateStruct
(String typeName, Object[] attributes)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/JDBC4MySQLConnection.java:46
↓ 3 callersMethoddecrement
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/PreparedStatement.java:568
↓ 3 callersMethoddetectFractionalSecondsSupport
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/PreparedStatement.java:795
↓ 3 callersMethoddetermineNeedsQuoting
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/Field.java:887
↓ 3 callersMethoddoPingInstead
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/StatementImpl.java:1504
↓ 3 callersMethodduplicate
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/MySQLConnection.java:44
↓ 3 callersMethodenqueuePacketForDebugging
(boolean isPacketBeingSent, boolean isPacketReused, int sendLength, byte[] header, Buffer packet)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/MysqlIO.java:3203
↓ 3 callersMethodescapeblockFast
(byte[] buf, Buffer packet, int size)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/PreparedStatement.java:1034
↓ 3 callersMethodexecuteInternal
Actually execute the prepared statement. This is here so server-side PreparedStatements can re-use most of the code from this class. @param maxRowsTo
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/PreparedStatement.java:1876
↓ 3 callersMethodexecuteTopLevelOnly
Should the driver execute this interceptor only for the "original" top-level query, and not put it in the execution path for queries that may be execu
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/StatementInterceptor.java:137
↓ 3 callersMethodexpandHostKeyValues
Expands hosts of the form address=(protocol=tcp)(host=localhost)(port=3306) into a java.util.Properties. Special characters (in this case () and =) mu
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/NonRegisteringDriver.java:844
↓ 3 callersMethodexposeAsProperties
(Properties info)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ConnectionPropertiesImpl.java:1313
↓ 3 callersMethodextractProcedureName
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/CallableStatement.java:942
↓ 3 callersMethodfetchMoreRows
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/RowDataCursor.java:369
↓ 3 callersMethodfill
(int readAtLeastTheseManyBytes)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/util/ReadAheadInputStream.java:50
↓ 3 callersMethodfillSendPacket
Creates the packet that contains the query to be sent to the server. @return A Buffer filled with the query representing the PreparedStatemen
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/PreparedStatement.java:2189
↓ 3 callersMethodfireStatementEvent
(StatementEvent event)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/jdbc2/optional/JDBC4MysqlXAConnection.java:89
↓ 3 callersMethodgenerateDeleteRuleClause
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/DatabaseMetaDataUsingInfoSchema.java:560
↓ 3 callersMethodgenerateOptionalRefContraintsJoin
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/DatabaseMetaDataUsingInfoSchema.java:555
↓ 3 callersMethodgenerateUpdateRuleClause
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/DatabaseMetaDataUsingInfoSchema.java:568
↓ 3 callersMethodgetActiveMySQLConnectionPassive
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/fabric/jdbc/FabricMySQLConnectionProxy.java:440
↓ 3 callersMethodgetArrayIndexMap
(List<String> l)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/RandomBalanceStrategy.java:121
↓ 3 callersMethodgetBestRowIdentifier
Get a description of a table's optimal set of columns that uniquely identifies a row. They are ordered by SCOPE. <P> Each column description has the f
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/DatabaseMetaData.java:1402
↓ 3 callersMethodgetBinaryInputStream
(int columnIndex)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/BufferRow.java:281
↓ 3 callersMethodgetBinaryStream
A column value can also be retrieved as a binary stream. This method is suitable for retrieving LONGVARBINARY values. @param columnIndex t
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ResultSetImpl.java:1405
↓ 3 callersMethodgetBook
()
pdb/pdb2rdf-parser/src/main/java/com/dumontierlab/pdb2rdf/parser/CitationCategoryHandler.java:454
↓ 3 callersMethodgetBytes
(int len)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/Buffer.java:190
↓ 3 callersMethodgetBytesWrapped
Returns the byte[] representation of the given string properly wrapped between the given char delimiters, (re)using the given charset converter, and t
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/StringUtils.java:646
↓ 3 callersMethodgetCacheCallableStmts
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ConnectionProperties.java:1041
↓ 3 callersMethodgetCachePrepStmts
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ConnectionProperties.java:1045
↓ 3 callersMethodgetCallableStmtCacheSize
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ConnectionProperties.java:1049
↓ 3 callersMethodgetClassNameForJavaType
(int javaType, boolean isUnsigned, int mysqlTypeIfKnown, boolean isBinaryOrBlob, boolean isOpaqueBinary,
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ResultSetMetaData.java:712
↓ 3 callersMethodgetDatasetResource
()
pdb/pdb2rdf-parser/src/main/java/com/dumontierlab/pdb2rdf/model/PdbRdfModel.java:174
↓ 3 callersMethodgetDate
Get the value of a column in the current row as a java.sql.Date object @param columnIndex the first column is 1, the second is 2... @retu
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ResultSetImpl.java:1965
↓ 3 callersMethodgetDate
()
pdb/pdb2rdf-parser/src/main/java/com/dumontierlab/pdb2rdf/model/PdbRdfModel.java:184
↓ 3 callersMethodgetDecimals
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/Field.java:497
↓ 3 callersMethodgetDefaultTimeZone
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/Util.java:72
↓ 3 callersMethodgetDouble
Get the value of a column in the current row as a Java double. @param columnIndex the first column is 1, the second is 2,... @return the
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ResultSetImpl.java:2220
↓ 3 callersMethodgetDumpMetadataOnColumnNotFound
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ConnectionProperties.java:997
↓ 3 callersMethodgetEncoding
Returns the Java encoding (if known) for this field. @return the Java encoding
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/Field.java:398
↓ 3 callersMethodgetFullName
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/Field.java:501
↓ 3 callersMethodgetFunctions
Retrieves a description of the system and user functions available in the given catalog. <P> Only system and user function descriptions matching the s
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/DatabaseMetaData.java:7914
↓ 3 callersMethodgetGatherPerfMetrics
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ConnectionProperties.java:1023
↓ 3 callersMethodgetGlobalGroupName
The name of the global group for this shard map.
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/fabric/ShardMapping.java:76
↓ 3 callersMethodgetGlobalTransactionId
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/jdbc2/optional/MysqlXid.java:96
↓ 3 callersMethodgetGroupName
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ConnectionGroup.java:74
↓ 3 callersMethodgetIO
Returns the IO channel to the server @return the IO channel to the server @throws SQLException if the connection is closed.
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ConnectionImpl.java:2845
↓ 3 callersMethodgetId
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ConnectionImpl.java:2813
↓ 3 callersMethodgetIdleFor
Reports how long this connection has been idle. This time (reported in milliseconds) is updated once a query has completed. @return number of ms that
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/Connection.java:133
↓ 3 callersMethodgetInstance
(ConnectionWrapper c, MysqlPooledConnection conn, CallableStatement toWrap)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/jdbc2/optional/CallableStatementWrapper.java:70
↓ 3 callersMethodgetInstance
(ConnectionWrapper c, MysqlPooledConnection conn, Statement toWrap)
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/jdbc2/optional/StatementWrapper.java:59
↓ 3 callersMethodgetIsInteractiveClient
@return Returns the isInteractiveClient.
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ConnectionProperties.java:186
↓ 3 callersMethodgetLoadBalanceAutoCommitStatementRegex
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ConnectionProperties.java:1327
↓ 3 callersMethodgetLoadBalanceAutoCommitStatementThreshold
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ConnectionProperties.java:1323
↓ 3 callersMethodgetLoadBalanceBlacklistTimeout
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ConnectionProperties.java:1271
↓ 3 callersMethodgetLoadBalanceConnectionGroup
()
linkedSPLs/LinkedSPLs-update/lib/mysql-connector-java-5.1.33/src/com/mysql/jdbc/ConnectionProperties.java:1301
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