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github.com/bauerdavid/napari-nD-annotator
/ functions
Functions
660 in github.com/bauerdavid/napari-nD-annotator
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Functions
660
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Types & classes
86
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Endpoints
5
Method
_dims_displayed
(self)
src/napari_nd_annotator/_widgets/minimal_contour_overlay/vispy_minimal_contour_overlay.py:368
Method
_dims_displayed
(self)
src/napari_nd_annotator/_widgets/interpolation_overlay/vispy_interpolation_overlay.py:133
Method
_dims_order_changed
(self)
src/napari_nd_annotator/_widgets/interpolation_widget.py:335
Method
_disable_mc_mode
(self, state)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:958
Method
_drag_points_callback
(self, layer, event)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:1251
Method
_draw_line
(x1, y1, x2, y2, brush_size, output)
src/napari_nd_annotator/_widgets/annotator_module.py:253
Method
_dump_path
(self)
src/napari_nd_annotator/_widgets/annotator_module.py:107
Method
_dump_path
(self)
src/napari_nd_annotator/_widgets/_utils/widget_with_layer_list.py:55
Method
_enable_interpolation_button
(self, *_)
src/napari_nd_annotator/_widgets/interpolation_widget.py:570
Method
_fill_holes
(self, layer: Labels, event)
src/napari_nd_annotator/_widgets/annotator_module.py:259
Method
_hide_demo_image
(self)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:523
Method
_increase_font_size
(self)
src/napari_nd_annotator/_widgets/_utils/image_processing_widget.py:204
Method
_init_bbox_layer
(self)
src/napari_nd_annotator/_widgets/annotator_module.py:328
Method
_initialize
(self, viewer: napari.Viewer, minimal_contour_widget: MinimalContourWidget)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:1165
Method
_mask_received
(self, data, offset)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:1208
Method
_move_bbox_to_top
(self, e=None)
src/napari_nd_annotator/_widgets/annotator_module.py:180
Method
_ndisplay_changed
(self)
src/napari_nd_annotator/_widgets/interpolation_widget.py:338
Method
_num_points
(self)
src/napari_nd_annotator/_widgets/minimal_contour_overlay/vispy_minimal_contour_overlay.py:372
Method
_on_active_layer_changed
(self, *_)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:858
Method
_on_bb_double_click
(self, layer=None, event=None)
src/napari_nd_annotator/_widgets/object_list.py:523
Method
_on_change
(self, *args, **kwargs)
src/napari_nd_annotator/_widgets/annotator_module.py:102
Method
_on_change
(self)
src/napari_nd_annotator/_widgets/_utils/widget_with_layer_list.py:50
Method
_on_checked
(self, value)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:957
Method
_on_colormap_change
Receive label colormap change event & update colorbox.
src/napari_nd_annotator/_widgets/_utils/changeable_color_box.py:64
Method
_on_ctrl_pressed
(self, _)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:909
Method
_on_dim_changed
(self, new_dim)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:713
Method
_on_enabled_change
(self)
src/napari_nd_annotator/_widgets/minimal_contour_overlay/vispy_minimal_contour_overlay.py:163
Method
_on_enabled_change
(self)
src/napari_nd_annotator/_widgets/interpolation_overlay/vispy_interpolation_overlay.py:85
Method
_on_labels_update
(self, event)
src/napari_nd_annotator/_widgets/interpolation_widget.py:624
Method
_on_layer_data_change
(self, event)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:939
Method
_on_layer_removed
(self, *_)
src/napari_nd_annotator/_widgets/_utils/widget_with_layer_list.py:171
Method
_on_layer_renamed
(self, *_)
src/napari_nd_annotator/_widgets/_utils/widget_with_layer_list.py:195
Method
_on_mouse_double_click
(self, layer, event)
src/napari_nd_annotator/_widgets/minimal_contour_overlay/vispy_minimal_contour_overlay.py:345
Method
_on_mouse_drag
(self, layer: Labels, event)
src/napari_nd_annotator/_widgets/interpolation_widget.py:587
Method
_on_mouse_move
Continuously redraw the latest polygon point with the current mouse position.
src/napari_nd_annotator/_widgets/minimal_contour_overlay/vispy_minimal_contour_overlay.py:247
Method
_on_mouse_scroll
(self, layer, event)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:739
Method
_on_mouse_wheel
(self, _, event)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:622
Method
_on_ndisplay_changed
(self)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:769
Method
_on_ndisplay_changed
(self, e)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:996
Method
_on_opacity_change
Receive layer model label selection change event & update colorbox.
src/napari_nd_annotator/_widgets/_utils/changeable_color_box.py:60
Method
_on_right_click
(self, layer, event: Event)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:634
Method
_on_selected_label_change
Receive layer model label selection change event & update colorbox.
src/napari_nd_annotator/_widgets/_utils/changeable_color_box.py:56
Method
_on_set_data
(self, event)
src/napari_nd_annotator/_widgets/interpolation_widget.py:630
Method
_on_slice_clicked
(self, layer, event)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:1398
Method
_on_smooth_checked
(self, is_checked)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:551
Method
_on_smoothness_changed
(self, value)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:558
Method
_on_width_change
(self)
src/napari_nd_annotator/_widgets/minimal_contour_overlay/vispy_minimal_contour_overlay.py:167
Function
_only_when_enabled
Decorator that wraps a callback of VispyLabelsPolygonOverlay. It ensures that the callback is only executed when all the conditions are met:
src/napari_nd_annotator/_widgets/minimal_contour_overlay/vispy_minimal_contour_overlay.py:31
Method
_refresh_layer
(self, layer_name)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:1214
Method
_rename_signals
(self)
src/napari_nd_annotator/_widgets/_utils/napari_slider.py:23
Method
_reset_interpolation_worker
(self)
src/napari_nd_annotator/_widgets/interpolation_widget.py:660
Method
_reset_overlay_worker
(self)
src/napari_nd_annotator/_widgets/interpolation_widget.py:663
Method
_run_feature_extractor
(self, image)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:1229
Method
_setValue
Convert the value from float to int before setting the slider value.
src/napari_nd_annotator/_widgets/_utils/napari_slider.py:19
Method
_set_features
(self, var_dict: dict)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:748
Method
_set_mask
(self, mask)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:385
Method
_set_use_straight_lines
(self)
src/napari_nd_annotator/_widgets/minimal_contour_overlay/vispy_minimal_contour_overlay.py:160
Method
_show_demo_image
(self)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:515
Method
_show_estimation_progress
(self, n_objects)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:1224
Method
_start_estimation
(self)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:785
Method
_start_update_bbox
(self, event)
src/napari_nd_annotator/_widgets/annotator_module.py:201
Method
_store_contour
(self, data)
src/napari_nd_annotator/_widgets/interpolation_widget.py:633
Method
_store_selected
(self, event)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:138
Method
_update_bbox
(self, layer)
src/napari_nd_annotator/_widgets/annotator_module.py:208
Method
_update_demo_image
(self, event=None)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:527
Method
active_labels_layer
(self)
src/napari_nd_annotator/_widgets/annotator_module.py:140
Method
active_labels_layer
(self)
src/napari_nd_annotator/_widgets/interpolation_widget.py:520
Method
add_shapes
(self, layer_name, data, layer_args)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:1457
Method
add_stored_widget
(self, id_, widget=None)
src/napari_nd_annotator/_widgets/_utils/persistence/persistent_widget_state.py:140
Method
alt_down
(self)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:369
Method
alt_down
(self)
src/napari_nd_annotator/_widgets/minimal_contour_overlay/vispy_minimal_contour_overlay.py:141
Method
bb_index_change
(self, _=None)
src/napari_nd_annotator/_widgets/object_list.py:578
Method
bbox_idx
(self)
src/napari_nd_annotator/_widgets/object_list.py:157
Method
begin_slice_annotation
(self, image_slice, distance_map_slice)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:246
Method
blur_sigma
(self)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:333
Method
blurring_conductance
(self)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:1149
Method
blurring_iterations
(self)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:1153
Method
blurring_type
(self)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:1145
Method
bounding_box
(self)
src/napari_nd_annotator/_widgets/object_list.py:138
Method
bounding_box_change
(self, layer, event)
src/napari_nd_annotator/_widgets/object_list.py:451
Method
bounding_box_layer
(self)
src/napari_nd_annotator/_widgets/object_list.py:302
Method
bounding_boxes_from_labels
(self)
src/napari_nd_annotator/_widgets/object_list.py:674
Method
center_calculated
(center)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:419
Method
change_layer
(_)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:921
Method
change_layer_callback
(num)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:920
Method
change_source_image
(self)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:157
Method
change_source_image
Change the source image layer for the currently active labels layer.
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:849
Method
change_symmetrically
(self, value)
src/napari_nd_annotator/_widgets/_utils/symmetric_range_slider.py:10
Method
checked
(self)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:589
Method
clean
(self)
src/napari_nd_annotator/minimal_contour/feature_manager.py:125
Method
clipping_widget
(self)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:677
Method
closeEvent
Disconnect events when widget is closing.
src/napari_nd_annotator/_widgets/_utils/changeable_color_box.py:105
Method
contour_smoothness
(self)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:353
Method
contour_width
(self)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:357
Method
create_bb_layer
(self, _)
src/napari_nd_annotator/_widgets/object_list.py:606
Method
crosshair_color
(self)
src/napari_nd_annotator/_widgets/projections.py:46
Method
ctrl_down
(self)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:365
Method
current_slice
(self)
src/napari_nd_annotator/_widgets/interpolation_widget.py:360
Method
data_finalizer
(self, name)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:542
Method
data_initializer
(self, name, selected_idx=None, layer_args=None)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:517
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