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Functions660 in github.com/bauerdavid/napari-nD-annotator

⨍ Functions 660◇ Types & classes 86↳ Endpoints 5
↓ 17 callersMethodadd_layer
(self, layer)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:911
↓ 16 callersMethodClean
src/napari_nd_annotator/minimal_contour/commontype.h:398
↓ 16 callersMethodmax
(self)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:617
↓ 16 callersMethodmin
(self)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:625
↓ 16 callersMethodsetLayout
(self, QLayout)
src/napari_nd_annotator/_widgets/_utils/collapsible_widget.py:30
↓ 16 callersMethodsetValue
(self, value)
src/napari_nd_annotator/_widgets/_utils/progress_widget.py:33
↓ 14 callersMethodclear
(self, _)
src/napari_nd_annotator/_widgets/minimal_contour_overlay/vispy_minimal_contour_overlay.py:392
↓ 14 callersFunctionlayer_slice_indices
(layer: layers.Layer)
src/napari_nd_annotator/_helper_functions.py:84
↓ 14 callersMethodupdate
(self, update_icon=True, new_size=None)
src/napari_nd_annotator/_widgets/projections.py:120
↓ 13 callersMethodClean
src/napari_nd_annotator/minimal_contour/Eikonal.h:160
↓ 11 callersMethodInitImageQuant
src/napari_nd_annotator/minimal_contour/Eikonal.h:121
↓ 11 callersFunctionmagnitude
(points)
src/napari_nd_annotator/mean_contour/cEssentials.py:75
↓ 10 callersFunctionlayer_dims_displayed
(layer: layers.Layer)
src/napari_nd_annotator/_helper_functions.py:43
↓ 8 callersMethodSet
src/napari_nd_annotator/minimal_contour/commontype.h:261
↓ 8 callersMethodget
(self)
src/napari_nd_annotator/_widgets/_utils/delayed_executor.py:16
↓ 8 callersMethodsetMaximum
(self, value)
src/napari_nd_annotator/_widgets/_utils/progress_widget.py:30
↓ 8 callersMethodvalue
(self)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:609
↓ 7 callersMethodsetText
(self, text)
src/napari_nd_annotator/_widgets/_utils/progress_widget.py:36
↓ 7 callersMethodupdate_items
(self, update_all_icons=False)
src/napari_nd_annotator/_widgets/object_list.py:485
↓ 6 callersMethod_blur_image
(self, img)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:653
↓ 6 callersMethod_set_image
(self, event=None)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:682
↓ 6 callersMethodindex
()
src/napari_nd_annotator/_widgets/object_list.py:364
↓ 5 callersMethodSetParam
src/napari_nd_annotator/minimal_contour/Eikonal.h:44
↓ 5 callersMethod_interpolate_all
(self)
src/napari_nd_annotator/_widgets/interpolation_widget.py:397
↓ 5 callersMethod_reset_contours
(self)
src/napari_nd_annotator/_widgets/interpolation_widget.py:650
↓ 5 callersMethod_update_widgets_state
(self)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:744
↓ 5 callersFunctionlayer_dims_not_displayed
(layer: layers.Layer)
src/napari_nd_annotator/_helper_functions.py:48
↓ 5 callersMethodreset_index
(self, starting_index=1)
src/napari_nd_annotator/_widgets/object_list.py:694
↓ 5 callersMethodsizeHint
(self)
src/napari_nd_annotator/_widgets/projections.py:308
↓ 4 callersMethodGetImgGrad
src/napari_nd_annotator/minimal_contour/commontype.h:1278
↓ 4 callersMethod__init__
(self, viewer, minimal_contour_widget: MinimalContourWidget, minimal_surface_widget, parent=None)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:178
↓ 4 callersMethod_update_slice
(self)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:729
↓ 4 callersMethodaddItem
(self, widget: CollapsibleWidget)
src/napari_nd_annotator/_widgets/_utils/collapsible_widget.py:72
↓ 4 callersFunctionbb_2_slice
(bb)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:89
↓ 4 callersFunctioncontour_cv2_mask_uniform
(mask, contoursize_max, correct_orientation = True)
src/napari_nd_annotator/_widgets/interpolation_widget.py:49
↓ 4 callersFunctioncorrect_container_size
(container)
src/napari_nd_annotator/_widgets/_utils/collapsible_widget.py:132
↓ 4 callersMethodisCollapsed
(self)
src/napari_nd_annotator/_widgets/_utils/collapsible_widget.py:48
↓ 4 callersMethodlayout
(self)
src/napari_nd_annotator/_widgets/_utils/collapsible_widget.py:33
↓ 4 callersFunctionpts_2_bb
(p1, p2, image_size, scale=1.)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:76
↓ 4 callersMethodremove_layer
(self, layer)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:925
↓ 4 callersMethodsetMinimum
(self, value)
src/napari_nd_annotator/_widgets/_utils/progress_widget.py:27
↓ 4 callersMethodset_calculator_feature
(features, grad_x=None, grad_y=None)
src/napari_nd_annotator/_widgets/minimal_contour_overlay/vispy_minimal_contour_overlay.py:145
↓ 4 callersMethodupdate
(self)
src/napari_nd_annotator/_widgets/interpolation_widget.py:115
↓ 4 callersMethodupdate_icon
(self)
src/napari_nd_annotator/_widgets/object_list.py:245
↓ 3 callersMethodCalcImageQuant
src/napari_nd_annotator/minimal_contour/Eikonal.cpp:435
↓ 3 callersMethodSetBoundaries
src/napari_nd_annotator/minimal_contour/Eikonal.h:63
↓ 3 callersMethod__init__
(self, viewer: Viewer)
src/napari_nd_annotator/_widgets/object_list.py:533
↓ 3 callersMethod__init__
(self, parent=None)
src/napari_nd_annotator/_widgets/_utils/image_processing_widget.py:117
↓ 3 callersMethod_apply_blurring
(self)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:411
↓ 3 callersFunction_coerce_indices_for_vectorization
Coerces indices so that they can be used for vectorized indexing in the given data array.
src/napari_nd_annotator/_helper_functions.py:27
↓ 3 callersMethod_get_layers_of_type
(self)
src/napari_nd_annotator/_widgets/_utils/widget_with_layer_list.py:206
↓ 3 callersMethod_hide_widgets
(self)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:778
↓ 3 callersMethod_initialize
(self, viewer: napari.Viewer, annotator_widget)
src/napari_nd_annotator/_widgets/interpolation_widget.py:297
↓ 3 callersMethod_update_clipping_planes
(self)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:1039
↓ 3 callersMethod_update_ghost_layers
(self)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:962
↓ 3 callersMethod_update_max_position
(self)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:718
↓ 3 callersMethod_update_ranges
(self)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:1002
↓ 3 callersMethodclear_memmap
(self)
src/napari_nd_annotator/minimal_contour/feature_manager.py:60
↓ 3 callersMethodgenerate_filename
(self, prefix, dims_displayed=None, suffix='')
src/napari_nd_annotator/minimal_contour/feature_manager.py:109
↓ 3 callersFunctiongenerate_sphere_mask
(shape)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:107
↓ 3 callersFunctiongetReconMethod
(reconText)
src/napari_nd_annotator/mean_contour/util.py:34
↓ 3 callersFunctionlayer_dims_order
(layer: layers.Layer)
src/napari_nd_annotator/_helper_functions.py:58
↓ 3 callersFunctionlayer_get_order
(layer: layers.Layer)
src/napari_nd_annotator/_helper_functions.py:87
↓ 3 callersMethodrun
(self)
src/napari_nd_annotator/mean_contour/meanContour.py:32
↓ 3 callersMethodsetCollapsed
(self, is_collapsed)
src/napari_nd_annotator/_widgets/_utils/collapsible_widget.py:36
↓ 2 callersMethodGetDataTerm
src/napari_nd_annotator/minimal_contour/Eikonal.h:41
↓ 2 callersMethodInitImageQuantGrad
src/napari_nd_annotator/minimal_contour/Eikonal.h:127
↓ 2 callersMethodRun
(self)
src/napari_nd_annotator/_widgets/_utils/image_processing_widget.py:184
↓ 2 callersMethodSetDataTerm
src/napari_nd_annotator/minimal_contour/Eikonal.h:39
↓ 2 callersMethod__init__
(self)
src/napari_nd_annotator/_widgets/_utils/delayed_executor.py:6
↓ 2 callersMethod_blur_image
(self, image)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:1307
↓ 2 callersMethod_create_slice_layer
(self)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:755
↓ 2 callersMethod_ensure_3d_image
(self, _=None)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:1378
↓ 2 callersMethod_get_mouse_coordinates
(self, event)
src/napari_nd_annotator/_widgets/minimal_contour_overlay/vispy_minimal_contour_overlay.py:356
↓ 2 callersMethod_on_image_changed
(self, *args)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:456
↓ 2 callersMethod_on_points_change
(self)
src/napari_nd_annotator/_widgets/minimal_contour_overlay/vispy_minimal_contour_overlay.py:172
↓ 2 callersMethod_on_points_change
(self)
src/napari_nd_annotator/_widgets/interpolation_overlay/vispy_interpolation_overlay.py:90
↓ 2 callersMethod_on_selected_label_change
Receive layer model label selection change event and update spinbox.
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:577
↓ 2 callersMethod_prefix
(self)
src/napari_nd_annotator/_widgets/_utils/collapsible_widget.py:57
↓ 2 callersMethod_remove_slice_layer
(self)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:749
↓ 2 callersMethod_select_source_image_dialog
Show a dialog to select/change the source image layer for labels_layer. Returns True if a source was successfully assigned, False otherwise.
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:806
↓ 2 callersMethod_set_color
(self, color)
src/napari_nd_annotator/_widgets/minimal_contour_overlay/vispy_minimal_contour_overlay.py:224
↓ 2 callersMethod_set_color
(self, color)
src/napari_nd_annotator/_widgets/interpolation_overlay/vispy_interpolation_overlay.py:110
↓ 2 callersMethod_set_fill_objects
(self, state)
src/napari_nd_annotator/_widgets/annotator_module.py:227
↓ 2 callersMethod_show_layer_has_no_source_txt
(self)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:791
↓ 2 callersMethod_start_interpolation
(self, idx, direction)
src/napari_nd_annotator/_widgets/interpolation_widget.py:503
↓ 2 callersMethod_store_orig_image
(self, *_)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:662
↓ 2 callersMethod_update_combobox
(self, layers)
src/napari_nd_annotator/_widgets/_utils/widget_with_layer_list.py:175
↓ 2 callersMethod_update_label_tooltip
(self)
src/napari_nd_annotator/_widgets/minimal_contour_widget.py:760
↓ 2 callersMethod_update_overlay
(self)
src/napari_nd_annotator/_widgets/interpolation_widget.py:347
↓ 2 callersMethodaddItem
(self, item: QObjectListWidgetItem)
src/napari_nd_annotator/_widgets/object_list.py:517
↓ 2 callersFunctionaverage_mask
(m1, m2, w1, w2)
src/napari_nd_annotator/_widgets/interpolation_widget.py:86
↓ 2 callersMethodcalcParams
(self)
src/napari_nd_annotator/mean_contour/cEssentials.py:147
↓ 2 callersMethodcreate_layers
(self)
src/napari_nd_annotator/_widgets/object_list.py:170
↓ 2 callersMethodcreate_list_widget
(self)
src/napari_nd_annotator/_widgets/object_list.py:623
↓ 2 callersFunctiondt
(points, order)
src/napari_nd_annotator/mean_contour/cEssentials.py:36
↓ 2 callersMethoddt
nextParam = self.nextParam prevParam = self.prevParam nextParam2 = np.roll(nextParam,-1,axis=0) prevParam2 = np.roll(prevParam
src/napari_nd_annotator/mean_contour/cEssentials.py:109
↓ 2 callersFunctiongenerate_label_colors
(n)
src/napari_nd_annotator/_widgets/minimal_surface_widget.py:98
↓ 2 callersMethodget_blurred_image
(self)
src/napari_nd_annotator/_widgets/_utils/blur_slider.py:58
↓ 2 callersMethodinsertItem
(self, index, item: QObjectListWidgetItem)
src/napari_nd_annotator/_widgets/object_list.py:513
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