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Functions1,743 in github.com/bab2min/tomotopy

⨍ Functions 1,743◇ Types & classes 460

↓ 357 callersMethodsize

src/Utils/Mmap.h:66

↓ 225 callersMethoddata

23.3.11.4, data access:

src/Utils/tvector.hpp:281

↓ 213 callersMethodemplace_back

src/Utils/tvector.hpp:298

↓ 207 callersMethodget

src/python/handler/PyUtils.h:105

↓ 149 callersFunctionlgammaT

src/Utils/math.h:153

↓ 108 callersMethodsize

src/python/handler/py_utils.cpp:106

↓ 83 callersMethodempty

23.3.11.3, capacity:

src/Utils/tvector.hpp:184

↓ 77 callersMethodresize

src/Utils/tvector.hpp:206

↓ 71 callersMethodtrain

Train the model using Gibbs-sampling with `iterations` iterations. Return `None`. After calling this method, you cannot `tomotopy.models.LDAModel.add

tomotopy/models.py:596

↓ 60 callersMethodgetK

src/TopicModel/HLDAModel.hpp:625

↓ 54 callersMethodget

src/Utils/Mmap.h:65

↓ 53 callersMethodgetNumWorkers

src/Utils/ThreadPool.hpp:33

↓ 49 callersMethodend

src/TopicModel/TopicModel.hpp:213

↓ 48 callersMethodend

src/Utils/Trie.hpp:91

↓ 47 callersMethodget

(self, sort_key:int, filter_target:int, filter_value:float, filter_keyword:str, filter_metadata:str, filter_nu

tomotopy/viewer/viewer_server.py:228

↓ 46 callersMethodbegin

src/TopicModel/TopicModel.hpp:208

↓ 45 callersMethodgetProb

src/Coherence/Common.h:35

↓ 44 callersMethodadd_doc

Add a new document into the corpus and return an index of the inserted document. This method requires either `words` parameter or `raw` and `user_dat

tomotopy/utils.py:237

↓ 44 callersMethodsize

src/Labeling/FoRelevance.cpp:67

↓ 42 callersFunctionbuildPyValue

src/python/handler/utils.h:317

↓ 42 callersFunctionrepr

src/python/handler/PyUtils.h:602

↓ 36 callersMethodrelease

src/python/handler/PyUtils.h:110

↓ 34 callersMethodemplace

src/Utils/tvector.hpp:322

↓ 31 callersFunctionformat

src/Utils/text.hpp:16

↓ 31 callersMethodgetSumWordWeight

src/TopicModel/LDA.h:108

↓ 30 callersFunctionbuildPyTuple

src/python/handler/PyUtils.h:1776

↓ 30 callersMethodsize

src/Utils/serializer.hpp:174

↓ 29 callersFunctionbuildPyValue

src/python/handler/PyUtils.h:580

↓ 29 callersMethodisIndependent

src/python/handler/utils.h:57

↓ 28 callersMethodback

src/Utils/tvector.hpp:270

↓ 27 callersFunctionas_mutable

src/Utils/Utils.hpp:14

↓ 27 callersMethodgetNext

src/Utils/Trie.hpp:76

↓ 26 callersMethodbegin

src/python/handler/label.h:70

↓ 25 callersMethodend

src/python/handler/label.h:75

↓ 25 callersMethodget_topic_words

Return the `top_n` words and their probabilities in the sub topic `sub_topic_id`. The return type is a `list` of (word:`str`, probability:`float`).

tomotopy/models.py:1522

↓ 25 callersMethodsize

src/Utils/tvector.hpp:189

↓ 25 callersMethodtoWid

src/Utils/Dictionary.cpp:32

↓ 24 callersMethodenqueue

src/Utils/ThreadPool.hpp:90

↓ 24 callersMethodinit

src/TopicModel/LDA.h:51

↓ 24 callersMethodsummary

.. versionadded:: 0.9.0 Print human-readable description of the current model Parameters ---------- initial_hp : bool whether to show the initia

tomotopy/models.py:551

↓ 21 callersMethodgetV

src/TopicModel/TopicModel.hpp:640

↓ 20 callersMethodbegin

src/Utils/Trie.hpp:86

↓ 20 callersMethodbegin

src/Labeling/FoRelevance.cpp:77

↓ 19 callersFunctiontoCpp

src/python/handler/PyUtils.h:630

↓ 18 callersMethod_addDoc

src/TopicModel/TopicModel.hpp:398

↓ 18 callersMethodprocess

Add multiple documents into the corpus through a given iterator `data_feeder` and return the number of documents inserted. Parameters ---------- data

tomotopy/utils.py:259

↓ 18 callersFunctionto_keyz

src/Utils/serializer.hpp:200

↓ 17 callersFunctioncomputeHash

src/Utils/serializer.hpp:244

↓ 16 callersMethodbegin

src/python/handler/py_utils.cpp:116

↓ 16 callersFunctionbuildRawDoc

src/python/handler/module.h:437

↓ 16 callersMethodend

src/python/handler/py_utils.cpp:121

↓ 16 callersMethodpush_back

src/Utils/tvector.hpp:304

↓ 16 callersFunctionto_key

src/Utils/serializer.hpp:188

↓ 15 callersMethodLDAModel

src/TopicModel/LDAModel.hpp:964

↓ 15 callersMethodadd

src/Utils/Dictionary.cpp:14

↓ 15 callersMethodclear

src/Utils/tvector.hpp:424

↓ 15 callersMethodconservativeResize

src/TopicModel/LDA.h:65

↓ 14 callersFunction_convert_term_weight

tomotopy/models.py:35

↓ 14 callersMethodend

src/Labeling/FoRelevance.cpp:82

↓ 14 callersMethodget_count_by_topics

Return the number of words allocated to each timepoint and topic in the shape `[num_timepoints, k]`. .. versionadded:: 0.9.0

tomotopy/models.py:2658

↓ 14 callersFunctionmakeTransformIter

src/Utils/Utils.hpp:384

↓ 14 callersFunctionprefixSum

src/Utils/sample.hpp:69

↓ 14 callersMethodread

src/Utils/serializer.hpp:727

↓ 14 callersMethodreserve

src/Utils/tvector.hpp:221

↓ 14 callersMethodwrite

src/Utils/serializer.hpp:721

↓ 13 callersMethod__init__

Parameters ---------- tw : Union[int, tomotopy.TermWeight] term weighting scheme in `tomotopy.TermWeight`. The default value is TermWeight.ONE min

tomotopy/models.py:1459

↓ 13 callersFunction_format_numpy

(arr, prefix='')

tomotopy/models.py:44

↓ 13 callersFunctionlog_ps

src/Utils/avx_mathfun.h:180

↓ 13 callersFunctionreadMany

src/Utils/serializer.hpp:274

↓ 13 callersFunctionwriteMany

src/Utils/serializer.hpp:253

↓ 13 callersFunctionwriteToStream

src/Utils/serializer.hpp:218

↓ 12 callersMethodgetDoc

src/python/handler/py_utils.cpp:151

↓ 12 callersFunctionhandleExc

src/python/handler/PyUtils.h:2199

↓ 12 callersMethodwords

a `list` of IDs for each word (read-only)

tomotopy/utils.py:84

↓ 11 callersFunctiongetDocumentCls

src/python/handler/utils.h:235

↓ 11 callersFunctionsampleFromDiscreteAcc

src/Utils/sample.hpp:134

↓ 10 callersMethodc_str

src/Utils/SharedString.cpp:101

↓ 10 callersMethodenqueueToAll

src/Utils/ThreadPool.hpp:115

↓ 10 callersMethodfront

src/Utils/tvector.hpp:260

↓ 10 callersMethodgetBoundDoc

src/python/handler/utils.h:164

↓ 10 callersMethodgetFail

src/Utils/Trie.hpp:81

↓ 10 callersMethodload

Load and return an instance from the file `filename` Parameters ---------- filename : str a path for the file to be loaded

tomotopy/utils.py:316

↓ 10 callersFunctionmakeStrideIter

src/Utils/Utils.hpp:423

↓ 10 callersMethodsave

Save the current instance into the file `filename`. Parameters ---------- filename : str a path for the file where the instance is saved

tomotopy/utils.py:303

↓ 10 callersMethodwrite

src/Utils/SharedString.h:76

↓ 9 callersMethodaddType

src/python/handler/PyUtils.h:3317

↓ 9 callersMethodcopy

src/python/handler/py_LDA.cpp:546

↓ 9 callersMethodgetTopicsByDoc

src/TopicModel/TopicModel.hpp:877

↓ 9 callersMethodget_topic_dist

Return a distribution of the topics in the document. Parameters ---------- normalize : bool .. versionadded:: 0.11.0 If True, it returns the

tomotopy/utils.py:31

↓ 8 callersMethod_makeFromRawDoc

src/TopicModel/TopicModel.hpp:420

↓ 8 callersMethodadd

src/python/handler/PyUtils.h:2159

↓ 8 callersMethodcapacity

src/Utils/tvector.hpp:201

↓ 8 callersMethodgetSibling

src/TopicModel/HLDAModel.hpp:29

↓ 8 callersMethodget_score

Calculate the coherence score for given `words` or `topic_id` Parameters ---------- words : Iterable[str] Words whose coherence is calculated.

tomotopy/coherence.py:138

↓ 8 callersFunctionnewEmptyArray

src/python/handler/PyUtils.h:1292

↓ 8 callersMethodstr

src/Utils/serializer.hpp:152

↓ 8 callersMethodupdate

src/TopicModel/PAModel.hpp:497

↓ 7 callersMethodbuild

src/Utils/Trie.hpp:97

↓ 7 callersFunctioncomputeFastHash

src/Utils/serializer.cpp:143

↓ 7 callersMethoderase

src/Utils/tvector.hpp:397

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