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700 symbols 2,283 edges 125 files 132 documented · 19%

What it actually does AI analysis from the code graph — generated when you open this

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Core symbols most depended-on inside this repo

load_jsonl

called by 12

scirex_utilities/json_utilities.py

overlap

called by 12

scirex_utilities/convert_brat_annotations_to_json.py

get_text

called by 10

dygiepp/scripts/data/genia/genia_xml_to_inline_sutd.py

add_to_text

called by 9

scirex_utilities/convert_pwc_to_brat.py

get_metric

called by 8

dygiepp/dygie/training/ner_metrics.py

adjust_spans_doc

called by 8

dygiepp/scripts/data/ace-event/parse_ace_event.py

get_metric

called by 7

scirex/metrics/span_f1_metrics.py

load_jsonl

called by 6

scirex_utilities/entity_utils.py

Shape

Method 365

Function 249

Class 84

Route 2

Languages

Python100%

Modules by API surface

dygiepp/dygie/data/dataset_readers/data_structures.py60 symbols

dygiepp/scripts/data/ace-event/parse_ace_event.py58 symbols

dygiepp/scripts/data/genia/genia_xml_to_inline_sutd.py35 symbols

scirex_utilities/convert_brat_annotations_to_json.py20 symbols

dygiepp/dygie/models/coref.py20 symbols

scirex/models/scirex_model.py19 symbols

dygiepp/dygie/models/events.py17 symbols

dygiepp/scripts/data/genia/merge_coref.py15 symbols

dygiepp/dygie/models/relation.py15 symbols

dygiepp/dygie/data/dataset_readers/ie_json.py14 symbols

dygiepp/dygie/training/event_metrics.py13 symbols

scirex_utilities/entity_matching_algorithms.py11 symbols

For agents

$ claude mcp add SciREX \
  -- python -m otcore.mcp_server <graph>

⬇ download graph artifact