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hub / github.com/SysBioChalmers/HGTphyloDetect

github.com/SysBioChalmers/HGTphyloDetect @main

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15 symbols 76 edges 5 files 0 documented · 0% ● updated 3y ago★ 443 open issues
What it actually does AI analysis from the code graph — generated when you open this
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Core symbols most depended-on inside this repo

getTaxid
called by 3
example/HGT_workflow.py
getTaxid
called by 3
main/HGT_workflow_close.py
getTaxid
called by 3
main/HGT_workflow_distant.py
parse_NCBI
called by 2
main/HGT_workflow_close.py
parse_NCBI
called by 2
main/HGT_workflow_distant.py
parse_NCBI
called by 1
example/HGT_workflow.py
main
called by 1
example/HGT_workflow.py
parse_NCBI
called by 1
phylogenetics/scripts/HGT_homologs_sequence.py

Shape

Function 15

Languages

Python100%

Modules by API surface

phylogenetics/scripts/HGT_homologs_sequence.py5 symbols
main/HGT_workflow_distant.py3 symbols
main/HGT_workflow_close.py3 symbols
example/HGT_workflow.py3 symbols
main/blastp.py1 symbols

For agents

$ claude mcp add HGTphyloDetect \
  -- python -m otcore.mcp_server <graph>

⬇ download graph artifact