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Functions
1,847 in github.com/SimpleITK/SimpleITK
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Functions
1,847
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Types & classes
404
↓ 1 callers
Function
my_open_read
(source)
Utilities/GenerateDocs/doxy2swig.py:44
↓ 1 callers
Function
my_open_write
(dest, mode="w")
Utilities/GenerateDocs/doxy2swig.py:51
↓ 1 callers
Method
onCommandDelete
Code/Common/src/sitkProcessObject.cxx:586
↓ 1 callers
Function
parse_Document
Dispatch for root document element
Utilities/Maintenance/JIRAHTMLReleaseNoteToWiki.py:78
↓ 1 callers
Function
parse_Element
Dispatch to correct handling do method
Utilities/Maintenance/JIRAHTMLReleaseNoteToWiki.py:64
↓ 1 callers
Function
parse_arguments
Parse command line arguments.
Utilities/GenerateDocs/generate_doc.py:133
↓ 1 callers
Function
print_usage
Wrapping/Lua/SimpleITKLuaMain.cxx:57
↓ 1 callers
Function
process_sitk_file
Process a single SimpleITK YAML file to update its documentation from ITK XML. Args: sitk_file: Path to the SimpleITK YAML file x
Utilities/GenerateDocs/generate_doc.py:311
↓ 1 callers
Function
process_xml
Prune any simplesect nodes that have a title node containing the text 'Wiki Examples'.
Utilities/GenerateDocs/generate_doc.py:229
↓ 1 callers
Function
pypi_monthly_downloads_country_report
( df: pd.DataFrame, figure_title: str, output_file_name: Union[Path, str] )
Utilities/Statistics/pypi_monthly_download_analysis.py:121
↓ 1 callers
Function
pypi_monthly_downloads_os_report
Generate a stacked bar chart of monthly PyPI downloads by operating system. Optionally overlay official SimpleITK releases on the plot. File
Utilities/Statistics/pypi_monthly_download_analysis.py:295
↓ 1 callers
Function
readCSV
Read the filters from a CSV file. Note that the only the Remark and ToDo fields are taken from the CSV file. The filter names and which toolk
Utilities/CompareITKandSITKFilters.py:107
↓ 1 callers
Function
read_raw
Read a raw binary scalar image. Parameters ---------- binary_file_name (str): Raw, binary image file content. image_size (tuple
Examples/RawImageReading/RawImageReading.py:29
↓ 1 callers
Function
retrieve_all_releases
Retrieve all releases from the specified GitHub repository. Args: repo (str): GitHub repository using 'owner/repo' format. t
Utilities/Statistics/github_downloads_analysis.py:51
↓ 1 callers
Function
retrieve_official_releases_and_dates
Retrieve all releases from the specified GitHub repository. Args: repo (str): GitHub repository using 'owner/repo' format. t
Utilities/Statistics/pypi_monthly_download_analysis.py:74
↓ 1 callers
Function
runargs
Wrapping/Lua/SimpleITKLuaMain.cxx:360
↓ 1 callers
Function
save_data_file
Save data to a YAML file with appropriate formatting.
Utilities/GenerateDocs/generate_doc.py:208
↓ 1 callers
Method
setTolerance
Testing/Unit/TestBase/sitkImageCompare.h:49
↓ 1 callers
Function
sitkImageArrayConvert
Code/Common/src/sitkBSplineTransform.cxx:30
↓ 1 callers
Function
slice_by_slice_decorator
A function decorator which executes func on each 3D sub-volume and *in-place* pastes the results into the input image. The input image type
Examples/SliceBySliceDecorator/SliceBySliceDecorator.py:28
↓ 1 callers
Function
threaded_read_test
Reads a list of files with thread parallelism, and verifies the hash of the resulting volume.
Wrapping/Python/tests/ConcurrentImageRead.py:44
↓ 1 callers
Function
traverse_xml
Recursively traverse an XML subtree to produce a formatted description string.
Utilities/GenerateDocs/generate_doc.py:244
↓ 1 callers
Function
v12
Testing/Unit/TestBase/SimpleITKTestHarness.h:259
↓ 1 callers
Function
v7
Testing/Unit/TestBase/SimpleITKTestHarness.h:246
↓ 1 callers
Function
validate_config
Validate a config file against a schema.
Utilities/JSON/ConfigValidate.py:40
↓ 1 callers
Function
verify_read_write
Verify image read/write operation maintains image integrity. Args: img: Original image to write output_path: Path where to write
Wrapping/Python/tests/sitkImageReadWrite.py:177
↓ 1 callers
Method
walkDir
(File dir, List<String> files)
Examples/DicomConvert/DicomConvert.java:82
↓ 1 callers
Function
writeCSV
Write the results out to a common-spaced-value file (readable by any spreadsheet program)
Utilities/CompareITKandSITKFilters.py:70
↓ 1 callers
Function
writeSlices
Write slices to output directory
Examples/DicomSeriesFromArray/DicomSeriesFromArray.py:30
↓ 1 callers
Method
writeSlices
Write slices to output directory
Examples/DicomSeriesFromArray/DicomSeriesFromArray.java:36
↓ 1 callers
Function
~ImageFilter
* Default Destructor */
Code/BasicFilters/include/sitkImageFilter.h:57
Method
AbortAtCommand
Testing/Unit/TestBase/SimpleITKTestHarness.cxx:116
Method
AddFixedMask
Code/ElastixTransformixWrappers/src/sitkElastixImageFilter.cxx:127
Method
AddITKObserver
Code/Registration/src/sitkImageRegistrationMethod.cxx:1179
Method
AddMovingMask
Code/ElastixTransformixWrappers/src/sitkElastixImageFilter.cxx:175
Method
AddObjectCallback
Code/Common/src/sitkObjectOwnedBase.cxx:55
Method
AddParameter
Code/ElastixTransformixWrappers/src/sitkElastixImageFilterImpl.cxx:835
Method
AddParameterMap
Code/ElastixTransformixWrappers/src/sitkElastixImageFilter.cxx:363
Method
AddParameterMap
Code/ElastixTransformixWrappers/src/sitkElastixImageFilterImpl.cxx:749
Method
AddTransformParameter
Code/ElastixTransformixWrappers/src/sitkTransformixImageFilter.cxx:269
Method
AddTransformParameter
Code/ElastixTransformixWrappers/src/sitkTransformixImageFilterImpl.cxx:519
Method
AddTransformParameterMap
Code/ElastixTransformixWrappers/src/sitkTransformixImageFilter.cxx:223
Method
AddTransformParameterMap
Code/ElastixTransformixWrappers/src/sitkTransformixImageFilterImpl.cxx:451
Function
ArrayAsIm
Wrapping/R/sitkRArray.cxx:225
Method
BindObject
Code/Common/include/sitkMemberFunctionFactoryBase.h:132
Function
CastITKToImage
Code/Common/include/sitkProcessObject.h:402
Function
CastImageToITK
Code/Common/include/sitkProcessObject.h:386
Method
CheckHash
(Image img, string expectedHash, ref int success)
Testing/Unit/CSharp/CSharpImageTest.cs:12
Method
CheckImageHashMD5
Testing/Unit/itkHashImageFilterTest.cxx:29
Method
CheckImageHashSHA1
Testing/Unit/itkHashImageFilterTest.cxx:48
Method
CheckImageMatchingDimension
Code/BasicFilters/src/sitkImageFilter.cxx:85
Method
CheckImageMatchingPixelType
Code/BasicFilters/src/sitkImageFilter.cxx:91
Method
CheckImageMatchingSize
Code/BasicFilters/src/sitkImageFilter.cxx:97
Method
Command
Code/Common/src/sitkCommand.cxx:24
Method
ComposeScaleSkewVersor3DTransform
construct identity
Code/Common/src/sitkComposeScaleSkewVersor3DTransform.cxx:29
Method
ComputeDeformationFieldOff
Code/ElastixTransformixWrappers/src/sitkTransformixImageFilter.cxx:121
Method
ComputeDeformationFieldOff
Code/ElastixTransformixWrappers/src/sitkTransformixImageFilterImpl.cxx:346
Method
ComputeDeformationFieldOn
Code/ElastixTransformixWrappers/src/sitkTransformixImageFilterImpl.cxx:340
Method
ComputeDeterminantOfSpatialJacobianOff
Code/ElastixTransformixWrappers/src/sitkTransformixImageFilter.cxx:97
Method
ComputeDeterminantOfSpatialJacobianOff
Code/ElastixTransformixWrappers/src/sitkTransformixImageFilterImpl.cxx:322
Method
ComputeDeterminantOfSpatialJacobianOn
Code/ElastixTransformixWrappers/src/sitkTransformixImageFilter.cxx:91
Method
ComputeDeterminantOfSpatialJacobianOn
Code/ElastixTransformixWrappers/src/sitkTransformixImageFilterImpl.cxx:316
Function
ComputeRotationOff
Code/BasicFilters/include/sitkCenteredVersorTransformInitializerFilter.h:80
Function
ComputeRotationOn
Set the value of ComputeRotation to true or false respectfully. */
Code/BasicFilters/include/sitkCenteredVersorTransformInitializerFilter.h:75
Method
ComputeSpatialJacobianOff
Code/ElastixTransformixWrappers/src/sitkTransformixImageFilter.cxx:73
Method
ComputeSpatialJacobianOff
Code/ElastixTransformixWrappers/src/sitkTransformixImageFilterImpl.cxx:297
Method
ComputeSpatialJacobianOn
Code/ElastixTransformixWrappers/src/sitkTransformixImageFilter.cxx:67
Method
ComputeSpatialJacobianOn
Code/ElastixTransformixWrappers/src/sitkTransformixImageFilterImpl.cxx:291
Function
ComputeZYXOff
Code/Common/include/sitkEuler3DTransform.h:95
Function
ComputeZYXOn
Code/Common/include/sitkEuler3DTransform.h:90
Method
ConvertImage
(string inputFile, string outputFile, int? newWidth)
Examples/DicomConvert/DicomConvert.cs:112
Method
CountCommand
Testing/Unit/TestBase/SimpleITKTestHarness.cxx:132
Method
CountPredicate
Testing/Unit/sitkTypeListsTests.cxx:30
Method
CreateBSplinePimpleTransform
Code/Common/src/sitkBSplineTransform.cxx:289
Method
CreateDisplacementFieldPimpleTransform
Code/Common/src/sitkDisplacementFieldTransform.cxx:310
Function
CreateKernel
Code/BasicFilters/src/sitkCreateKernel.h:33
Method
CreateScalesEstimator
Code/Registration/src/sitkImageRegistrationMethod.cxx:661
Method
CreateSpatialObjectMask
Code/Registration/src/sitkImageRegistrationMethod.cxx:702
Method
CustomCast
Code/Registration/src/sitkImageRegistrationMethod.cxx:55
Method
CustomCast
Code/Registration/src/sitkImageRegistrationMethod_CreateOptimizer.cxx:59
Method
CustomCast
Code/Registration/src/sitkImageRegistrationMethod_CreateOptimizer.cxx:68
Method
DataFinder
Testing/Unit/TestBase/SimpleITKTestHarness.cxx:13
Method
DeleteCommandAtCommand
Testing/Unit/sitkCommonTests.cxx:348
Function
DiscreteGaussian
Function to run the Execute method of this filter
Code/BasicFilters/src/sitkAdditionalProcedures.cxx:162
Method
DisplayDebugText
Code/Common/src/sitkLogger.cxx:86
Method
DisplayDebugText
(self, s)
Examples/Logging/Logging.py:92
Method
DisplayErrorText
Code/Common/src/sitkLogger.cxx:60
Method
DisplayErrorText
(self, s)
Examples/Logging/Logging.py:83
Method
DisplayGenericOutputText
Code/Common/src/sitkLogger.cxx:99
Method
DisplayGenericOutputText
(self, s)
Examples/Logging/Logging.py:89
Method
DisplayText
Code/Common/src/sitkLogger.cxx:47
Method
DisplayText
Display text message.
Examples/Logging/Logging.py:77
Method
DisplayWarningText
Code/Common/src/sitkLogger.cxx:73
Method
DisplayWarningText
(self, s)
Examples/Logging/Logging.py:86
Method
DoSomething
Testing/Unit/sitkCommonTests.cxx:647
Method
DualExecuteInternal
Code/ElastixTransformixWrappers/src/sitkElastixImageFilterImpl.cxx:196
Method
DualMemberFunctionFactory
\brief Constructor which permanently binds the constructed * object to pObject */
Code/Common/include/sitkDualMemberFunctionFactory.h:80
Method
ElastixImageFilterImpl
Code/ElastixTransformixWrappers/src/sitkElastixImageFilterImpl.cxx:11
Method
EvaluateInternal
Code/Registration/src/sitkImageRegistrationMethod.cxx:1029
Method
EventCommand
Code/Common/src/sitkProcessObject.cxx:102
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