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Functions9,324 in github.com/SimVascular/SimVascular

↓ 2 callersFunctionreadheader_
Code/ThirdParty/SolverIO/simvascular_solverio/cvSolverIO.cxx:612
↓ 2 callersMethodreconstructmesh
Code/ThirdParty/tetgen/simvascular_tetgen/tetgen.cxx:22628
↓ 2 callersFunctionremoveEventListeners
* Unbinds all event listeners.
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:994
↓ 2 callersFunctionresNetBlock
(x,nlayers=10,nfilters_small=32,nfilters_large=128,init='xavier',activation=tf.nn.relu,scope='resconv')
Python/site-packages/sv_ml/modules/layers.py:145
↓ 2 callersMethodrewindFile
Code/ThirdParty/SolverIO/simvascular_solverio/cvSolverIO.cxx:128
↓ 2 callersMethodsample_branch
Sample points and areas of a centerline group along a path Args: br: BranchId sample: optional, sample points
Python/site-packages/sv_rom_simulation/mesh.py:384
↓ 2 callersFunctionscan_tree
=========================================================================== * Scan a literal or distance tree to determine the frequencies of the cod
Code/ThirdParty/zlib/simvascular_zlib/trees.c:707
↓ 2 callersMethodscoutpoint
Code/ThirdParty/tetgen/simvascular_tetgen/tetgen.cxx:23258
↓ 2 callersMethodsearch
Get ids of points in geometry closest to input points Args: points: list of points to be searched radius: opt
Python/site-packages/sv_rom_extract_results/vtk_functions.py:111
↓ 2 callersFunctionsearchDataNode
Code/Source/sv4gui/Plugins/org.sv.pythondatanodes/sv4gui_Vis_init_py.cxx:525
↓ 2 callersFunctionseg_main
(size, modality, patient_id, data_folder, data_out_folder, model_folder, view_attributes, channel)
Python/site-packages/sv_auto_lv_modeling/segmentation/prediction.py:165
↓ 2 callersMethodsend_input
(self, input)
BuildWithMake/Release/Jupyter/windows/site-packages/simvascular_python_kernel/simvascular_python_proxy.py:83
↓ 2 callersMethodsend_input
(self, input)
BuildWithMake/Release/Jupyter/windows/site-packages/cygwin_bash_kernel/cygwin_bash_proxy.py:83
↓ 2 callersMethodsend_input
(self, input)
BuildWithMake/Release/Jupyter/windows/site-packages/simvascular_tcl_kernel/simvascular_tcl_proxy.py:83
↓ 2 callersMethodsend_input
(self, input)
BuildWithMake/Release/Jupyter/windows/site-packages/powershell_kernel/powershell_proxy.py:83
↓ 2 callersMethodsend_input
(self, input)
BuildWithMake/Release/Jupyter/linux/site-packages/simvascular_python_kernel/simvascular_python_proxy.py:83
↓ 2 callersMethodsend_input
(self, input)
BuildWithMake/Release/Jupyter/linux/site-packages/simvascular_tcl_kernel/simvascular_tcl_proxy.py:83
↓ 2 callersMethodsend_input
(self, input)
Externals/Make/2019.06/BuildHelpers/Jupyter/site-packages/cygwin_bash_kernel/cygwin_bash_proxy.py:53
↓ 2 callersMethodsend_input
(self, input)
Externals/Make/2019.06/BuildHelpers/Jupyter/site-packages/simvascular_tcl_kernel/simvascular_tcl_proxy.py:53
↓ 2 callersMethodsend_input
(self, input)
Externals/Make/2019.06/BuildHelpers/Jupyter/site-packages/powershell_kernel/powershell_proxy.py:53
↓ 2 callersMethodsend_input
(self, input)
Externals/Make/2019.02/BuildHelpers/Jupyter/site-packages/cygwin_bash_kernel/cygwin_bash_proxy.py:53
↓ 2 callersMethodsend_input
(self, input)
Externals/Make/2019.02/BuildHelpers/Jupyter/site-packages/simvascular_tcl_kernel/simvascular_tcl_proxy.py:53
↓ 2 callersMethodsend_input
(self, input)
Externals/Make/2019.02/BuildHelpers/Jupyter/site-packages/powershell_kernel/powershell_proxy.py:53
↓ 2 callersFunctionsend_tree
=========================================================================== * Send a literal or distance tree in compressed form, using the codes in
Code/ThirdParty/zlib/simvascular_zlib/trees.c:752
↓ 2 callersFunctionseparate_disconnected_polydata
Separate disconnected PolyData into separate PolyData objects Args: poly: VTK PolyData Returns: components: list of VTK
Python/site-packages/sv_auto_lv_modeling/modeling/src/utils.py:696
↓ 2 callersMethodsetDistanceMap
Code/Source/sv2/ImageProcessing/sv2_DistanceMap.cxx:636
↓ 2 callersFunctionsetPreviousVerticalIndex
* Stores the vertical index of a stack so that the same * vertical slide can be selected when navigating to and * from the stack. * * @par
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:1657
↓ 2 callersMethodsetPropValue
-------------- setPropValue -------------- Set the value of a property by its name.
Code/Source/sv4gui/Modules/svFSI/sv4gui_svFSIeqClass.cxx:216
↓ 2 callersMethodsetResliceSize
Code/Source/sv4gui/Modules/QtWidgets/sv4gui_ResliceSlider.cxx:156
↓ 2 callersFunctionset_parameters
Set the values of parameters input from the command line.
Python/site-packages/sv_rom_extract_results/extract_results.py:178
↓ 2 callersFunctionshowSlide
* Called when the given slide is within the configured view * distance. Shows the slide element and loads any content * that is set to load lazi
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:2721
↓ 2 callersMethodstart
Code/Source/sv4gui/Plugins/org.sv.gui.qt.svfsi/sv4gui_svFSIPluginActivator.cxx:42
↓ 2 callersFunctionstartEmbeddedContent
* Start playback of any embedded content inside of * the targeted slide.
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:2897
↓ 2 callersFunctionsubdivision
(poly,num,option='linear')
Python/site-packages/sv_auto_lv_modeling/modeling/src/utils.py:1107
↓ 2 callersFunctionsv4guiStringUtils_lower
Code/Source/sv4gui/Modules/Common/sv4gui_StringUtils.h:79
↓ 2 callersFunctionsv4guiStringUtils_trim
Code/Source/sv4gui/Modules/Common/sv4gui_StringUtils.h:75
↓ 2 callersFunctionsv4guisvFSIeqClass
Code/Source/sv4gui/Modules/svFSI/sv4gui_svFSIeqClass.h:81
↓ 2 callersFunctionsvSeed
Code/Source/sv4gui/Modules/Segmentation/sv4gui_Seg3D.h:56
↓ 2 callersFunctionsv_parse_registry_for_environment_variables
Code/Source/Application/sv_use_win32_registry.cxx:344
↓ 2 callersFunctionswap_labels_back
(labels,pred)
Python/site-packages/sv_auto_lv_modeling/segmentation/src/pre_process.py:44
↓ 2 callersFunctionsys_geom_Get2DPgon
Code/Source/sv/Geometry/sv_sys_geom.cxx:937
↓ 2 callersFunctionsys_geom_SplinePath
Code/Source/sv/Geometry/sv_spline.cxx:566
↓ 2 callersFunctionsys_geom_splinePtsToPathPlan
Code/Source/sv/Geometry/sv_spline.cxx:39
↓ 2 callersFunctiontag_polydata
Tag polydata with a tag id Args: poly: VTK PolyData tag: tag id (int) Returns: poly: tagged PolyData
Python/site-packages/sv_auto_lv_modeling/modeling/src/utils.py:1047
↓ 2 callersFunctiontoggleOverview
* Toggles the slide overview mode on and off. * * @param {Boolean} override Optional flag which overrides the * toggle logic and forcibly set
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:1867
↓ 2 callersFunctiontogglePause
* Toggles the paused mode on and off.
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:1967
↓ 2 callersFunctiontqlrat
Code/Source/sv/Mesh/AdaptObject/sv_eispack.cxx:2021
↓ 2 callersMethodtransfernodes
Code/ThirdParty/tetgen/simvascular_tetgen/tetgen.cxx:10763
↓ 2 callersFunctiontred2
Code/Source/sv/Mesh/AdaptObject/sv_eispack.cxx:2446
↓ 2 callersFunctionupdateOverview
* Moves the overview viewport to the current slides. * Called each time the current slide changes.
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:1783
↓ 2 callersFunctionupdateParallax
* Updates the position of the parallax background based * on the current slide index.
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:2664
↓ 2 callersMethodupdateReslice
Code/Source/sv4gui/Modules/QtWidgets/sv4gui_ResliceSlider.cxx:166
↓ 2 callersFunctionupdateSlideNumber
* Updates the slide number div to reflect the current slide. * * Slide number format can be defined as a string using the * following variabl
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:2470
↓ 2 callersFunctionupdateSlides
* Updates one dimension of slides by showing the slide * with the specified index. * * @param {String} selector A CSS selector that will fetc
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:2268
↓ 2 callersFunctionupdatewindow
Update the window with the last wsize (normally 32K) bytes written before returning. If window does not exist yet, create it. This is only called
Code/ThirdParty/zlib/simvascular_zlib/inflate.c:323
↓ 2 callersFunctionupsample2D
(x, scope='upsample')
Python/site-packages/sv_ml/modules/layers.py:128
↓ 2 callersFunctionvis_imgInit
(ren)
Python/site-packages/sv_vis/img.py:40
↓ 2 callersFunctionvtkSVNURBSCurve
Constructor
Code/Source/vtkSV/Modules/NURBS/vtkSVNURBSCurve.h:63
↓ 2 callersFunctionvtkSVNURBSSurface
Constructor
Code/Source/vtkSV/Modules/NURBS/vtkSVNURBSSurface.h:62
↓ 2 callersFunctionvtkWriteImage2
Code/Source/sv3/ITKSegmentation/sv3_ITKUtils.cxx:260
↓ 2 callersFunctionwriteURL
* Updates the page URL (hash) to reflect the current * state. * * @param {Number} delay The time in ms to wait before * writing the hash
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:3137
↓ 2 callersFunctionwrite_geo
Write geometry to file Args: fname: file name
Python/site-packages/sv_rom_extract_results/vtk_functions.py:65
↓ 2 callersFunctionwrite_motion
(mesh_dir, start_point, intpl_num, output_dir, num_cycle, duration, debug=False, mode='displacement')
Python/site-packages/sv_auto_lv_modeling/modeling/svfsi/interpolation.py:121
↓ 2 callersFunctionwrite_table
(out, table)
Code/ThirdParty/zlib/simvascular_zlib/crc32.c:183
↓ 2 callersFunctionwritedatablock_
Code/ThirdParty/SolverIO/simvascular_solverio/cvSolverIO.cxx:651
↓ 2 callersFunctionwriteheader_
Code/ThirdParty/SolverIO/simvascular_solverio/cvSolverIO.cxx:636
↓ 2 callersFunctiony
(c,d)
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/lib/js/head.min.js:8
↓ 2 callersFunctionz
()
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/lib/js/head.min.js:8
↓ 1 callersFunctionARG_FindArgvIx
Code/Source/sv/Utils/sv_arg.cxx:191
↓ 1 callersFunctionAdaptPrintMethods
Code/Source/sv/Mesh/AdaptObject/sv_adapt_init.cxx:370
↓ 1 callersFunctionAdaptUtils_E_error
relative interpolation error along an edge ----------------------------- E_error() ----------------------------- * @brief This is called by maxLocalEr
Code/Source/sv/Mesh/AdaptObject/sv_adapt_utils.cxx:1172
↓ 1 callersFunctionAdaptUtils_SmoothHessians
----------------------------- SmoothHessians() ----------------------------- * @brief simple average over a patch surrounding the vertex * @note This
Code/Source/sv/Mesh/AdaptObject/sv_adapt_utils.cxx:100
↓ 1 callersFunctionAdaptUtils_averageSolutionsOnMesh
Code/Source/sv/Mesh/AdaptObject/sv_adapt_utils.cxx:255
↓ 1 callersFunctionAdaptUtils_fix4SolutionTransfer
----------------------------- fix4SolutionTransfer() ----------------------------- * @brief This function interpolates the solution from the old mesh
Code/Source/sv/Mesh/AdaptObject/sv_adapt_utils.cxx:491
↓ 1 callersFunctionAdaptUtils_getHessian
----------------------------- getHessian() ----------------------------- * @brief returns a vector with hessian values from vtkDoubleArray * @note Th
Code/Source/sv/Mesh/AdaptObject/sv_adapt_utils.cxx:227
↓ 1 callersFunctionAdaptUtils_getSurfaceBooleans
Code/Source/sv/Mesh/AdaptObject/sv_adapt_utils.cxx:1203
↓ 1 callersFunctionAdaptUtils_gradientsFromFilter
Code/Source/sv/Mesh/AdaptObject/sv_adapt_utils.cxx:680
↓ 1 callersFunctionAdaptUtils_hessiansFromFilter
Code/Source/sv/Mesh/AdaptObject/sv_adapt_utils.cxx:715
↓ 1 callersFunctionAdaptUtils_hessiansFromSolution
----------------------------- hessiansFromSolution() ----------------------------- * @brief This function calls the gradient and hessian filters to ge
Code/Source/sv/Mesh/AdaptObject/sv_adapt_utils.cxx:761
↓ 1 callersFunctionAdaptUtils_maxLocalError
max relative interpolation error at a vertex ----------------------------- maxLocalError() ----------------------------- * @brief This returns the max
Code/Source/sv/Mesh/AdaptObject/sv_adapt_utils.cxx:1112
↓ 1 callersFunctionAdaptUtils_modelFaceIDTransfer
Code/Source/sv/Mesh/AdaptObject/sv_adapt_utils.cxx:554
↓ 1 callersFunctionAdaptUtils_setSizeFieldUsingHessians
----------------------------- setSizeFieldUsingHessians() ----------------------------- * @brief This function takes the hessian field data and comput
Code/Source/sv/Mesh/AdaptObject/sv_adapt_utils.cxx:852
↓ 1 callersFunctionAdaptUtils_writeArrayToFile
to write array to a phasta file (filename) NOTE: array should be transposed!!! `fieldName' tells in which block to write like solution, error etc. `ou
Code/Source/sv/Mesh/AdaptObject/sv_adapt_utils.cxx:1492
↓ 1 callersFunctionAdapt_Init
Code/Source/sv/Mesh/AdaptObject/sv_adapt_init.cxx:127
↓ 1 callersMethodAdd
Code/ThirdParty/tinyxml/simvascular_tinyxml/tinyxml.cxx:1565
↓ 1 callersMethodAddBoundaryConstraints
---------------------- AddBoundaryConstraints ----------------------
Code/Source/vtkSV/Modules/Geometry/vtkSVLocalQuadricDecimation.cxx:661
↓ 1 callersFunctionAddContourDataNode
Code/Source/sv4gui/Plugins/org.sv.pythondatanodes/sv4gui_Vis_init_py.cxx:435
↓ 1 callersFunctionAddImageFromFile
----------------- AddImageFromFile -----------------
Code/Source/sv4gui/Plugins/org.sv.pythondatanodes/sv4gui_Vis_init_py.cxx:544
↓ 1 callersMethodAddMyObserver
Code/Source/sv4gui/Plugins/org.sv.gui.qt.meshing/sv4gui_VtkMeshSphereWidget.cxx:52
↓ 1 callersMethodAddPathElement
---------------- AddPathElement ----------------
Code/Source/sv4gui/Plugins/org.sv.gui.qt.imageprocessing/sv4gui_ImagePathsContainer.cxx:72
↓ 1 callersMethodAddQuadric
---------------------- AddQuadric ----------------------
Code/Source/vtkSV/Modules/Geometry/vtkSVLocalQuadricDecimation.cxx:748
↓ 1 callersFunctionAddSegmentationDataNode
------------------------- AddSegmentationDataNode ------------------------- Add a Segmentaion data node to the SV Data Manager.
Code/Source/sv4gui/Plugins/org.sv.pythondatanodes/Dmg_PyModule.cxx:349
↓ 1 callersMethodAddStartSeed
-------------- AddStartSeed -------------- Add the position of a start seed to m_SeedContainer.
Code/Source/sv4gui/Plugins/org.sv.gui.qt.imageprocessing/sv4gui_ImageProcessing.cxx:705
↓ 1 callersFunctionAddToDataStorage
Code/Source/sv4gui/Plugins/org.sv.gui.qt.mitksegmentation/sv4gui_QmitkBooleanOperationsWidget.cxx:77
↓ 1 callersMethodAddToDataStorage
Code/Source/sv4gui/Plugins/org.sv.gui.qt.mitksegmentation/sv4gui_QmitkImageMaskingWidget.cxx:325
↓ 1 callersMethodAddToRemoveList
Code/Source/sv4gui/Modules/ProjectManagement/sv4gui_DataFolder.cxx:83
↓ 1 callersMethodAfterCreateQtPartControl
Code/Source/sv4gui/Plugins/org.sv.gui.qt.datamanager/sv4gui_QmitkFunctionality.cxx:122
↓ 1 callersMethodAppendEndPoints
Code/ThirdParty/vmtk/simvascular_vmtk/vtkvmtkPolyDataCenterlines.cxx:474
↓ 1 callersMethodApplyAllProperties
Code/Source/sv4gui/Modules/Path/sv4gui_PathVtkMapper3D.cxx:397
↓ 1 callersMethodAsCircle
Code/Source/sv4gui/Modules/Segmentation/sv4gui_ContourEllipse.cxx:74
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