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Functions9,324 in github.com/SimVascular/SimVascular

↓ 2 callersFunctioncgeom_FindDegen
Code/Source/sv/Utils/sv_cgeom.cxx:645
↓ 2 callersFunctioncheck_header
=========================================================================== Check the gzip header of a gz_stream opened for reading. Set the str
Code/ThirdParty/zlib/simvascular_zlib/gzio.c:288
↓ 2 callersMethodcheck_value
Check that a value added to the list matches the list template. Some values can have multiple types (e.g. face_id) so check that
Python/site-packages/sv/meshsim_options.py:96
↓ 2 callersFunctioncolorToRgb
* Converts various color input formats to an {r:0,g:0,b:0} object. * * @param {String} color The string representation of a color, * the foll
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:1147
↓ 2 callersFunctioncompress_block
=========================================================================== * Send the block data compressed using the given Huffman trees */
Code/ThirdParty/zlib/simvascular_zlib/trees.c:1072
↓ 2 callersFunctioncontourToSeg
Converts an ordered set of points to a segmentation (i.e. fills the inside of the contour), uses the point in polygon method args:
Python/site-packages/sv_ml/modules/vascular_data.py:299
↓ 2 callersFunctionconv_block
(input_tensor, num_filters)
Python/site-packages/sv_auto_lv_modeling/segmentation/src/model.py:37
↓ 2 callersMethodconvert_to_binary
(self)
Python/site-packages/sv_auto_lv_modeling/modeling/src/image_processing.py:44
↓ 2 callersMethodcreateDistanceMap
Code/Source/sv2/ImageProcessing/sv2_DistanceMap.cxx:75
↓ 2 callersFunctioncreate_volume_mesh
(poly_fn, edge_size, output_dir)
Python/site-packages/sv_auto_lv_modeling/modeling/volume_mesh_main.py:42
↓ 2 callersMethodcross
cross() computes the cross product: n = v1 cross v2.
Code/ThirdParty/tetgen/simvascular_tetgen/tetgen.h:3342
↓ 2 callersFunctioncvSign
Code/Source/sv/Utils/sv_misc_utils.h:193
↓ 2 callersFunctiondistanceBetween
* Measures the distance in pixels between point a * and point b. * * @param {Object} a point with x/y properties * @param {Object} b point
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:1079
↓ 2 callersFunctiondo_flush
=========================================================================== Flushes all pending output into the compressed file. The parameter
Code/ThirdParty/zlib/simvascular_zlib/gzio.c:705
↓ 2 callersFunctiondstore
Code/ThirdParty/tetgen/simvascular_tetgen/predicates.cxx:470
↓ 2 callersFunctionenablePreviewLinks
* Bind preview frame links.
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:1372
↓ 2 callersMethodencode
Code/ThirdParty/tetgen/simvascular_tetgen/tetgen.h:2322
↓ 2 callersFunctionfind_boundary_edges
Finds boundary edges of a VTK PolyData Args: mesh: VTK PolyData Returns: edges: Extracted boundary edges as VTK Pol
Python/site-packages/sv_auto_lv_modeling/modeling/src/utils.py:651
↓ 2 callersFunctionfixedtables
Return state with length and distance decoding tables and index sizes set to fixed code decoding. Normally this returns fixed tables from inffixed
Code/ThirdParty/zlib/simvascular_zlib/inflate.c:205
↓ 2 callersFunctionfstore
Code/ThirdParty/tetgen/simvascular_tetgen/predicates.cxx:415
↓ 2 callersFunctiongen_codes
=========================================================================== * Generate the codes for a given tree and bit counts (which need not be
Code/ThirdParty/zlib/simvascular_zlib/trees.c:577
↓ 2 callersMethodgenerate_surface
(self, region_id, smooth_iter, band)
Python/site-packages/sv_auto_lv_modeling/modeling/src/image_processing.py:57
↓ 2 callersFunctiongetAbsoluteHeight
* Retrieves the height of the given element by looking * at the position and height of its immediate children.
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:1213
↓ 2 callersFunctiongetComputedSlideSize
* Calculates the computed pixel size of our slides. These * values are based on the width and height configuration * options.
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:1619
↓ 2 callersMethodgetDistanceMap
Code/Source/sv2/ImageProcessing/sv2_DistanceMap.cxx:282
↓ 2 callersFunctiongetLong
=========================================================================== Reads a long in LSB order from the given gz_stream. Sets z_err in case
Code/ThirdParty/zlib/simvascular_zlib/gzio.c:935
↓ 2 callersMethodgetPath
Code/Source/sv2/ImageProcessing/sv2_DistanceMap.cxx:384
↓ 2 callersMethodgetPathByThinning
Code/Source/sv2/ImageProcessing/sv2_DistanceMap.cxx:479
↓ 2 callersFunctiongetPreviousVerticalIndex
* Retrieves the vertical index which was stored using * #setPreviousVerticalIndex() or 0 if no previous index * exists. * * @param {HTMLEl
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:1672
↓ 2 callersMethodgetResliceSize
Code/Source/sv4gui/Modules/QtWidgets/sv4gui_ResliceSlider.cxx:161
↓ 2 callersFunctiongetSlideBackground
* Returns the background element for the given slide. * All slides, even the ones with no background properties * defined, have a background ele
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:3259
↓ 2 callersFunctiongetSlidePastCount
* Returns the number of past slides. This can be used as a global * flattened index for slides.
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:3003
↓ 2 callersFunctiongetTotalSlides
* Retrieves the total number of slides in this presentation.
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:3231
↓ 2 callersFunctionget_log_file_name
()
Python/site-packages/sv_rom_simulation/manage.py:37
↓ 2 callersFunctionget_log_file_name
()
Python/site-packages/sv_rom_extract_results/manage.py:41
↓ 2 callersMethodget_output
(self)
BuildWithMake/Release/Jupyter/windows/site-packages/simvascular_python_kernel/simvascular_python_proxy.py:75
↓ 2 callersMethodget_output
(self)
BuildWithMake/Release/Jupyter/windows/site-packages/cygwin_bash_kernel/cygwin_bash_proxy.py:75
↓ 2 callersMethodget_output
(self)
BuildWithMake/Release/Jupyter/windows/site-packages/simvascular_tcl_kernel/simvascular_tcl_proxy.py:75
↓ 2 callersMethodget_output
(self)
BuildWithMake/Release/Jupyter/windows/site-packages/powershell_kernel/powershell_proxy.py:75
↓ 2 callersMethodget_output
(self)
BuildWithMake/Release/Jupyter/linux/site-packages/simvascular_python_kernel/simvascular_python_proxy.py:75
↓ 2 callersMethodget_output
(self)
BuildWithMake/Release/Jupyter/linux/site-packages/simvascular_tcl_kernel/simvascular_tcl_proxy.py:75
↓ 2 callersMethodget_output
(self)
Externals/Make/2019.06/BuildHelpers/Jupyter/site-packages/cygwin_bash_kernel/cygwin_bash_proxy.py:45
↓ 2 callersMethodget_output
(self)
Externals/Make/2019.06/BuildHelpers/Jupyter/site-packages/simvascular_tcl_kernel/simvascular_tcl_proxy.py:45
↓ 2 callersMethodget_output
(self)
Externals/Make/2019.06/BuildHelpers/Jupyter/site-packages/powershell_kernel/powershell_proxy.py:45
↓ 2 callersMethodget_output
(self)
Externals/Make/2019.02/BuildHelpers/Jupyter/site-packages/cygwin_bash_kernel/cygwin_bash_proxy.py:45
↓ 2 callersMethodget_output
(self)
Externals/Make/2019.02/BuildHelpers/Jupyter/site-packages/simvascular_tcl_kernel/simvascular_tcl_proxy.py:45
↓ 2 callersMethodget_output
(self)
Externals/Make/2019.02/BuildHelpers/Jupyter/site-packages/powershell_kernel/powershell_proxy.py:45
↓ 2 callersFunctionget_polydata_centroid
Calculate the centroid of polydata
Python/site-packages/sv_rom_simulation/centerlines.py:149
↓ 2 callersFunctionget_powershell
()
BuildWithMake/Release/Jupyter/windows/site-packages/powershell_kernel/util.py:33
↓ 2 callersMethodget_reslice
(self, p, n, v)
Python/site-packages/sv_ml/modules/sv_image.py:64
↓ 2 callersMethodget_volume
(self)
Python/site-packages/sv_auto_lv_modeling/modeling/src/models.py:42
↓ 2 callersMethodgetpointmeshsize
Code/ThirdParty/tetgen/simvascular_tetgen/tetgen.cxx:23433
↓ 2 callersFunctionggems_CrossingsMultiplyTest
Code/Source/sv/Geometry/sv_ggems.cxx:158
↓ 2 callersFunctiongz_open
=========================================================================== Opens a gzip (.gz) file for reading or writing. The mode parameter
Code/ThirdParty/zlib/simvascular_zlib/gzio.c:93
↓ 2 callersFunctiongzclearerr
=========================================================================== Clear the error and end-of-file flags, and do the same for the real f
Code/ThirdParty/zlib/simvascular_zlib/gzio.c:1017
↓ 2 callersFunctionhideSlide
* Called when the given slide is moved outside of the * configured view distance.
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:2804
↓ 2 callersFunctioni4_max
Code/Source/sv/Mesh/AdaptObject/sv_eispack.cxx:732
↓ 2 callersFunctionimg_calcCorrectionEqn
Code/Source/sv2/ImageProcessing/sv2_calc_correction_eqn.cxx:44
↓ 2 callersFunctionimg_calcCorrectionEqnAuto
Code/Source/sv2/ImageProcessing/sv2_calc_correction_eqn.cxx:282
↓ 2 callersFunctionimg_threshold
Code/Source/sv2/ImageProcessing/sv2_img_threshold.cxx:36
↓ 2 callersMethodinit
Code/ThirdParty/tinyxml/simvascular_tinyxml/tinystr.h:206
↓ 2 callersFunctioninit_block
=========================================================================== * Initialize a new block. */
Code/ThirdParty/zlib/simvascular_zlib/trees.c:411
↓ 2 callersFunctioninit_logging
(outputDir="./")
Python/site-packages/sv_rom_simulation/manage.py:40
↓ 2 callersFunctioninit_logging
(outputDir="./")
Python/site-packages/sv_rom_extract_results/manage.py:44
↓ 2 callersMethodinitializepools
Code/ThirdParty/tetgen/simvascular_tetgen/tetgen.cxx:4501
↓ 2 callersFunctioninitpyContour
Code/Source/sv3/Segmentation/sv3_Contour_init_py.cxx:208
↓ 2 callersFunctioninitpyGUI
Code/Source/sv4gui/Plugins/org.sv.pythondatanodes/sv4gui_Vis_init_py.cxx:151
↓ 2 callersFunctioninitpyImage
Code/Source/sv2/ImageProcessing/sv2_image_init_py.cxx:1359
↓ 2 callersFunctioninitpyItkls
Code/Source/sv3/ITKSegmentation/sv3_ITKLset_init_py.cxx:77
↓ 2 callersFunctioninitpyMeshAdapt
Code/Source/sv/Mesh/AdaptObject/sv_adapt_init_py.cxx:262
↓ 2 callersFunctioninitpyMeshObject
Code/Source/PythonAPI/Meshing_PyModule.cxx:508
↓ 2 callersFunctioninitpyRepository
Code/Source/sv/Repository/sv_repos_init_py.cxx:167
↓ 2 callersFunctioninitpySolid
Code/Source/sv/Model/SolidModel/sv_solid_init_py.cxx:502
↓ 2 callersFunctioninjectStyleSheet
* Injects the given CSS styles into the DOM.
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:1124
↓ 2 callersFunctionisSpeakerNotes
* Checks if this presentation is running inside of the * speaker notes window.
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:3080
↓ 2 callersFunctionlayoutOverview
* Uses CSS transforms to position all slides in a grid for * display inside of the overview mode.
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:1740
↓ 2 callersMethodlinearInterpolateCurve
---------------------- LinearInterpolateCurve ----------------------
Code/Source/vtkSV/Modules/Misc/vtkSVLoftSplineSurface.cxx:665
↓ 2 callersMethodload_images
(self)
Python/site-packages/sv_auto_lv_modeling/modeling/src/registration.py:99
↓ 2 callersMethodload_tetmesh
Code/ThirdParty/tetgen/simvascular_tetgen/tetgen.cxx:2349
↓ 2 callersFunctionlongest_match
For 80x86 and 680x0, an optimized version will be provided in match.asm or * match.S. The code will be functionally equivalent. */
Code/ThirdParty/zlib/simvascular_zlib/deflate.c:1034
↓ 2 callersFunctionmake_crc_table
MAKECRCH */ Generate tables for a byte-wise 32-bit CRC calculation on the polynomial: x^32+x^26+x^23+x^22+x^16+x^12+x^11+x^10+x^8+x^7+x^5+x^4+x^2+x+
Code/ThirdParty/zlib/simvascular_zlib/crc32.c:106
↓ 2 callersFunctionmrRead_Header
Code/Source/sv2/ImageProcessing/sv2_read_header.cxx:145
↓ 2 callersFunctionmr_decode
Code/Source/sv2/ImageProcessing/sv2_decode.cxx:40
↓ 2 callersFunctionmr_decode_masked
Code/Source/sv2/ImageProcessing/sv2_decode.cxx:83
↓ 2 callersMethodoutnodes
Code/ThirdParty/tetgen/simvascular_tetgen/tetgen.cxx:28858
↓ 2 callersMethodoutsubfaces
Code/ThirdParty/tetgen/simvascular_tetgen/tetgen.cxx:29542
↓ 2 callersMethodparse_commandline
Code/ThirdParty/tetgen/simvascular_tetgen/tetgen.cxx:2958
↓ 2 callersFunctionpause
* Enters the paused mode which fades everything on screen to * black.
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:1933
↓ 2 callersFunctionpolyGetActor
(ren, obj)
Python/site-packages/sv_vis/poly.py:109
↓ 2 callersFunctionpqdownheap
=========================================================================== * Restore the heap property by moving down the tree starting at node k,
Code/ThirdParty/zlib/simvascular_zlib/trees.c:455
↓ 2 callersMethodpredict
(self,x)
Python/site-packages/sv_ml/base/model.py:37
↓ 2 callersFunctionproceed
()
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:333
↓ 2 callersMethodprocess_images
(image)
Python/site-packages/sv_auto_lv_modeling/modeling/src/registration.py:82
↓ 2 callersFunctionputLong
=========================================================================== Outputs a long in LSB order to the given file */
Code/ThirdParty/zlib/simvascular_zlib/gzio.c:920
↓ 2 callersFunctionr8_epsilon
Code/Source/sv/Mesh/AdaptObject/sv_eispack.cxx:947
↓ 2 callersFunctionr8_max
Code/Source/sv/Mesh/AdaptObject/sv_eispack.cxx:986
↓ 2 callersFunctionreadURL
* Reads the current URL (hash) and navigates accordingly.
Code/Source/sv4gui/Plugins/org.sv.gui.qt.application/resources/welcome/js/reveal.js:3089
↓ 2 callersFunctionread_geo
Read geometry from file, chose corresponding vtk reader Args: fname: vtp surface or vtu volume mesh Returns: vtk reader,
Python/site-packages/sv_rom_extract_results/vtk_functions.py:43
↓ 2 callersMethodread_segment_data
Read in segment data. A subset of segment data files can be read in by 1) Giving segment names, stored in self.params.s
Python/site-packages/sv_rom_extract_results/solver.py:285
↓ 2 callersMethodread_solver_file
Read in a 1D solver .in file.
Python/site-packages/sv_rom_extract_results/solver.py:157
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