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github.com/OpenMS/OpenMS
/ types & classes
Types & classes
2,562 in github.com/OpenMS/OpenMS
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Functions
12,842
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Types & classes
2,562
↓ 2,503 callers
Class
String
src/openms/include/OpenMS/SYSTEM/RWrapper.h:20
↓ 1,104 callers
Class
String
src/tests/class_tests/openms_gui/include/GUI/TOPPView_test.h:22
↓ 313 callers
Class
String
src/openms_gui/include/OpenMS/VISUAL/LogWindow.h:20
↓ 209 callers
Class
DataValue
src/openms/include/OpenMS/CONCEPT/Types.h:226
↓ 156 callers
Class
string
src/openms/include/OpenMS/KERNEL/MassTrace.h:22
↓ 150 callers
Class
MzMLFile
src/openms/include/OpenMS/ANALYSIS/ID/FIAMSScheduler.h:16
↓ 110 callers
Class
PositionLess
Comparator by position. Lexicographical comparison (first RT then m/z) is done.
src/openms/include/OpenMS/KERNEL/Peak2D.h:294
↓ 103 callers
Class
QString
src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h:24
↓ 84 callers
Class
CoarseIsotopePatternGenerator
src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:25
↓ 83 callers
Class
IntensityLess
@name Comparator classes. These classes implement binary predicates that can be used to compare two peaks with respect to their intensitie
src/openms/include/OpenMS/KERNEL/Peak2D.h:219
↓ 80 callers
Class
QColor
src/openms_gui/include/OpenMS/VISUAL/PainterBase.h:19
↓ 77 callers
Class
IsobaricChannelInformation
src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:38
↓ 63 callers
Class
ParamValue
src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:21
↓ 63 callers
Class
String
src/openms/include/OpenMS/FORMAT/MzTabFile.h:22
↓ 62 callers
Class
Param
src/openms/include/OpenMS/SYSTEM/File.h:19
↓ 62 callers
Class
QStringList
src/openms/include/OpenMS/SYSTEM/RWrapper.h:15
↓ 61 callers
Class
TypeNameBinding
connect the type to some other information We could also use paired arrays, but this way, its less likely to have mismatches if a new type is added
src/openms/source/FORMAT/FileTypes.cpp:22
↓ 57 callers
Class
RTLess
Comparator by RT position
src/openms/include/OpenMS/KERNEL/Peak2D.h:244
↓ 56 callers
Class
MZLess
Comparator by m/z position
src/openms/include/OpenMS/KERNEL/Peak2D.h:269
↓ 53 callers
Class
QString
src/openms/include/OpenMS/DATASTRUCTURES/String.h:18
↓ 39 callers
Class
MSSpectrum
src/openms/include/OpenMS/CHEMISTRY/Tagger.h:16
↓ 36 callers
Class
PeptideHit
src/openms/include/OpenMS/QC/DBSuitability.h:25
↓ 33 callers
Class
ChromatogramPeak
src/openms/include/OpenMS/KERNEL/MSExperiment.h:24
↓ 32 callers
Class
QStringList
src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h:23
↓ 32 callers
Class
String
src/openms/include/OpenMS/DATASTRUCTURES/StringUtilsSimple.h:24
↓ 28 callers
Class
QRectF
src/openms_gui/include/OpenMS/VISUAL/MISC/GUIHelpers.h:18
↓ 24 callers
Class
ProteinIdentification
src/openms/include/OpenMS/KERNEL/FeatureMap.h:33
↓ 22 callers
Class
Exception
src/openms/include/OpenMS/FORMAT/OMSFileStore.h:19
↓ 22 callers
Class
PeptideIdentification
src/openms/include/OpenMS/QC/RTAlignment.h:16
↓ 21 callers
Class
ParamXMLFile
src/openms/include/OpenMS/QC/DBSuitability.h:23
↓ 18 callers
Class
Adduct
src/openms/include/OpenMS/DATASTRUCTURES/Compomer.h:21
↓ 18 callers
Class
ConsensusMap
src/openms/include/OpenMS/QC/QCBase.h:20
↓ 18 callers
Class
PeakIndex
src/openms_gui/include/OpenMS/VISUAL/Painter2DBase.h:34
↓ 18 callers
Class
String
src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathQC.h:20
↓ 17 callers
Class
String
src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:20
↓ 17 callers
Class
T
src/openms/include/OpenMS/ANALYSIS/ID/IDConflictResolverAlgorithm.h:66
↓ 16 callers
Class
AASeqWithMassComparator
* @brief The AASeqWithMassComparator is a comparator for AASeqWithMass objects. This comparator allows to sort AASeqWithMass objects by the
src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:255
↓ 16 callers
Class
Feature
src/openms/include/OpenMS/FORMAT/FeatureXMLFile.h:19
↓ 16 callers
Class
QPoint
src/openms_gui/include/OpenMS/VISUAL/PainterBase.h:22
↓ 15 callers
Class
IMLess
Comparator by IM position
src/openms/include/OpenMS/KERNEL/MobilityPeak2D.h:239
↓ 13 callers
Class
MobilityLess
Comparator by mobility position.
src/openms/include/OpenMS/KERNEL/MobilityPeak1D.h:177
↓ 12 callers
Class
CVMappingTerm
src/openms/include/OpenMS/DATASTRUCTURES/CVMappingRule.h:18
↓ 12 callers
Class
CheckBox
struct for all information about a check box of an ion
src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.h:54
↓ 12 callers
Class
FeatureMap
src/openms/include/OpenMS/QC/FWHM.h:15
↓ 12 callers
Class
MSExperiment
src/openms/include/OpenMS/QC/TIC.h:26
↓ 12 callers
Class
Param
src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h:34
↓ 12 callers
Class
Unit
src/openms/include/OpenMS/METADATA/CVTerm.h:30
↓ 10 callers
Class
FeatureHandle
src/openms/include/OpenMS/KERNEL/BaseFeature.h:19
↓ 10 callers
Class
FileTypeList
src/openms_gui/include/OpenMS/VISUAL/MISC/GUIHelpers.h:31
↓ 10 callers
Class
String
@brief A more convenient string class. It is based on std::string but adds a lot of methods for convenience. @ingroup Datastructures *
src/openms/include/OpenMS/DATASTRUCTURES/String.h:32
↓ 9 callers
Class
CVMappingRule
src/openms/source/DATASTRUCTURES/CVMappings.cpp:17
↓ 9 callers
Class
ChromatogramTools
@brief Conversion class to convert chromatograms There are basically two methods implemented, conversion of chromatograms into spectra repres
src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:29
↓ 9 callers
Class
DateTime
src/openms/include/OpenMS/FORMAT/SequestOutfile.h:22
↓ 9 callers
Class
FileInfo
Provides utility functions for filenames. FileInfo provides easy access to the components of a file's path relative to the project root.
src/tests/coding/cpplint.py:1550
↓ 9 callers
Class
LayerStoreData
src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:38
↓ 9 callers
Class
ResidueModification
src/openms/include/OpenMS/CHEMISTRY/Residue.h:22
↓ 9 callers
Class
Result
src/openms/include/OpenMS/DATASTRUCTURES/FASTAContainer.h:320
↓ 9 callers
Class
Statement
src/openms/include/OpenMS/FORMAT/OMSFileStore.h:20
↓ 9 callers
Class
TestResult
A Result from a single test which either passed or failed. In addition, it contains information about the reason why the test failed, who is
tools/PythonExtensionChecker.py:792
↓ 8 callers
Class
AASequence
src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:24
↓ 8 callers
Class
Counter
Dict subclass for counting hashable objects. Sometimes called a bag or multiset. Elements are stored as dictionary keys and their counts are
src/pyOpenMS/tests/unittests/collections_.py:12
↓ 8 callers
Class
MSChromatogram
src/openms/include/OpenMS/QC/TIC.h:27
↓ 8 callers
Class
PeakFileOptions
src/openms/include/OpenMS/FORMAT/FileHandler.h:20
↓ 8 callers
Class
QString
src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/INIFileEditorWindow.h:23
↓ 8 callers
Class
String
src/openms/include/OpenMS/DATASTRUCTURES/StringUtils.h:29
↓ 8 callers
Class
TheoreticalSpectrumGenerator
src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAHelper.h:18
↓ 7 callers
Class
FASTAEntry
src/openms/include/OpenMS/FORMAT/FASTAFile.h:45
↓ 6 callers
Class
CVReference
src/openms/include/OpenMS/DATASTRUCTURES/CVMappings.h:19
↓ 6 callers
Class
DPosition
src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:28
↓ 6 callers
Class
FeatureFinder
forward declaration
src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderDefs.h:21
↓ 6 callers
Class
RM
src/tests/class_tests/openms/source/RangeManager_test.cpp:30
↓ 6 callers
Class
RowCompare
Comparison operator for sorting rows
src/openms/include/OpenMS/FORMAT/MzTab.h:205
↓ 6 callers
Class
TransformationDescription
src/openms/include/OpenMS/QC/RTAlignment.h:17
↓ 6 callers
Class
Value
src/tests/class_tests/openms/source/HashGrid_test.cpp:19
↓ 5 callers
Class
AreaIterator
src/openms/include/OpenMS/KERNEL/AreaIterator.h:35
↓ 5 callers
Class
ExperimentalSettings
src/openms/include/OpenMS/FORMAT/SwathFile.h:22
↓ 5 callers
Class
FloatDataArray
Float data array class
src/openms/include/OpenMS/METADATA/DataArrays.h:19
↓ 5 callers
Class
MetaInfoInterface
src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h:31
↓ 5 callers
Class
ProteinGroup
indistinguishable protein groups (size, nr targets, score)
src/openms/include/OpenMS/ANALYSIS/ID/IDBoostGraph.h:69
↓ 5 callers
Class
String
src/openms/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h:23
↓ 5 callers
Class
String
src/openms/include/OpenMS/METADATA/MetaInfo.h:21
↓ 5 callers
Class
String
src/openms/include/OpenMS/KERNEL/SpectrumHelper.h:18
↓ 5 callers
Enum
Type
Actual file types enum.
src/openms/include/OpenMS/FORMAT/FileTypes.h:30
↓ 5 callers
Class
XLPrecursorComparator
comparator for sorting XLPrecursor vectors and using upper_bound and lower_bound using only a precursor mass * @brief The XLPrecursorComparator is a c
src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:204
↓ 5 callers
Enum
type
src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:59
↓ 4 callers
Class
CLSMScoreComparator
* @brief Comparator to sort CrossLinkSpectrumMatches by the main score */
src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:159
↓ 4 callers
Class
ControlledVocabulary
src/openms/include/OpenMS/FORMAT/VALIDATORS/MzMLValidator.h:16
↓ 4 callers
Class
DBoundingBox
src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:25
↓ 4 callers
Class
DIntervalBase
src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:29
↓ 4 callers
Class
DigestionEnzymeProtein
src/openms/include/OpenMS/CHEMISTRY/DecoyGenerator.h:17
↓ 4 callers
Class
Dummy
src/tests/class_tests/openms/source/UniqueIdIndexer_test.cpp:27
↓ 4 callers
Class
InputFile
Information about input files that were processed
src/openms/include/OpenMS/METADATA/ID/InputFile.h:24
↓ 4 callers
Class
LockMass
helper class, describing a lock mass
src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h:48
↓ 4 callers
Class
MetaInfoRegistry
src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h:47
↓ 4 callers
Class
ProgressLogger
src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLHandler.h:28
↓ 4 callers
Enum
SpectrumType
src/openms/include/OpenMS/METADATA/SpectrumSettings.h:44
↓ 4 callers
Class
TextFile
src/openms/include/OpenMS/FORMAT/ExperimentalDesignFile.h:19
↓ 4 callers
Class
WindowMower
src/openms/include/OpenMS/QC/FragmentMassError.h:20
↓ 3 callers
Enum
ActivationMethod
Method of activation
src/openms/include/OpenMS/METADATA/Precursor.h:58
↓ 3 callers
Class
Assay
src/openms/include/OpenMS/METADATA/MSQuantifications.h:83
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