MCPcopy Create free account

hub / github.com/OpenMS/OpenMS / types & classes

Types & classes2,562 in github.com/OpenMS/OpenMS

↓ 2,503 callersClassString
src/openms/include/OpenMS/SYSTEM/RWrapper.h:20
↓ 1,104 callersClassString
src/tests/class_tests/openms_gui/include/GUI/TOPPView_test.h:22
↓ 313 callersClassString
src/openms_gui/include/OpenMS/VISUAL/LogWindow.h:20
↓ 209 callersClassDataValue
src/openms/include/OpenMS/CONCEPT/Types.h:226
↓ 156 callersClassstring
src/openms/include/OpenMS/KERNEL/MassTrace.h:22
↓ 150 callersClassMzMLFile
src/openms/include/OpenMS/ANALYSIS/ID/FIAMSScheduler.h:16
↓ 110 callersClassPositionLess
Comparator by position. Lexicographical comparison (first RT then m/z) is done.
src/openms/include/OpenMS/KERNEL/Peak2D.h:294
↓ 103 callersClassQString
src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h:24
↓ 84 callersClassCoarseIsotopePatternGenerator
src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:25
↓ 83 callersClassIntensityLess
@name Comparator classes. These classes implement binary predicates that can be used to compare two peaks with respect to their intensitie
src/openms/include/OpenMS/KERNEL/Peak2D.h:219
↓ 80 callersClassQColor
src/openms_gui/include/OpenMS/VISUAL/PainterBase.h:19
↓ 77 callersClassIsobaricChannelInformation
src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:38
↓ 63 callersClassParamValue
src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:21
↓ 63 callersClassString
src/openms/include/OpenMS/FORMAT/MzTabFile.h:22
↓ 62 callersClassParam
src/openms/include/OpenMS/SYSTEM/File.h:19
↓ 62 callersClassQStringList
src/openms/include/OpenMS/SYSTEM/RWrapper.h:15
↓ 61 callersClassTypeNameBinding
connect the type to some other information We could also use paired arrays, but this way, its less likely to have mismatches if a new type is added
src/openms/source/FORMAT/FileTypes.cpp:22
↓ 57 callersClassRTLess
Comparator by RT position
src/openms/include/OpenMS/KERNEL/Peak2D.h:244
↓ 56 callersClassMZLess
Comparator by m/z position
src/openms/include/OpenMS/KERNEL/Peak2D.h:269
↓ 53 callersClassQString
src/openms/include/OpenMS/DATASTRUCTURES/String.h:18
↓ 39 callersClassMSSpectrum
src/openms/include/OpenMS/CHEMISTRY/Tagger.h:16
↓ 36 callersClassPeptideHit
src/openms/include/OpenMS/QC/DBSuitability.h:25
↓ 33 callersClassChromatogramPeak
src/openms/include/OpenMS/KERNEL/MSExperiment.h:24
↓ 32 callersClassQStringList
src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h:23
↓ 32 callersClassString
src/openms/include/OpenMS/DATASTRUCTURES/StringUtilsSimple.h:24
↓ 28 callersClassQRectF
src/openms_gui/include/OpenMS/VISUAL/MISC/GUIHelpers.h:18
↓ 24 callersClassProteinIdentification
src/openms/include/OpenMS/KERNEL/FeatureMap.h:33
↓ 22 callersClassException
src/openms/include/OpenMS/FORMAT/OMSFileStore.h:19
↓ 22 callersClassPeptideIdentification
src/openms/include/OpenMS/QC/RTAlignment.h:16
↓ 21 callersClassParamXMLFile
src/openms/include/OpenMS/QC/DBSuitability.h:23
↓ 18 callersClassAdduct
src/openms/include/OpenMS/DATASTRUCTURES/Compomer.h:21
↓ 18 callersClassConsensusMap
src/openms/include/OpenMS/QC/QCBase.h:20
↓ 18 callersClassPeakIndex
src/openms_gui/include/OpenMS/VISUAL/Painter2DBase.h:34
↓ 18 callersClassString
src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathQC.h:20
↓ 17 callersClassString
src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:20
↓ 17 callersClassT
src/openms/include/OpenMS/ANALYSIS/ID/IDConflictResolverAlgorithm.h:66
↓ 16 callersClassAASeqWithMassComparator
* @brief The AASeqWithMassComparator is a comparator for AASeqWithMass objects. This comparator allows to sort AASeqWithMass objects by the
src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:255
↓ 16 callersClassFeature
src/openms/include/OpenMS/FORMAT/FeatureXMLFile.h:19
↓ 16 callersClassQPoint
src/openms_gui/include/OpenMS/VISUAL/PainterBase.h:22
↓ 15 callersClassIMLess
Comparator by IM position
src/openms/include/OpenMS/KERNEL/MobilityPeak2D.h:239
↓ 13 callersClassMobilityLess
Comparator by mobility position.
src/openms/include/OpenMS/KERNEL/MobilityPeak1D.h:177
↓ 12 callersClassCVMappingTerm
src/openms/include/OpenMS/DATASTRUCTURES/CVMappingRule.h:18
↓ 12 callersClassCheckBox
struct for all information about a check box of an ion
src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.h:54
↓ 12 callersClassFeatureMap
src/openms/include/OpenMS/QC/FWHM.h:15
↓ 12 callersClassMSExperiment
src/openms/include/OpenMS/QC/TIC.h:26
↓ 12 callersClassParam
src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h:34
↓ 12 callersClassUnit
src/openms/include/OpenMS/METADATA/CVTerm.h:30
↓ 10 callersClassFeatureHandle
src/openms/include/OpenMS/KERNEL/BaseFeature.h:19
↓ 10 callersClassFileTypeList
src/openms_gui/include/OpenMS/VISUAL/MISC/GUIHelpers.h:31
↓ 10 callersClassString
@brief A more convenient string class. It is based on std::string but adds a lot of methods for convenience. @ingroup Datastructures *
src/openms/include/OpenMS/DATASTRUCTURES/String.h:32
↓ 9 callersClassCVMappingRule
src/openms/source/DATASTRUCTURES/CVMappings.cpp:17
↓ 9 callersClassChromatogramTools
@brief Conversion class to convert chromatograms There are basically two methods implemented, conversion of chromatograms into spectra repres
src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:29
↓ 9 callersClassDateTime
src/openms/include/OpenMS/FORMAT/SequestOutfile.h:22
↓ 9 callersClassFileInfo
Provides utility functions for filenames. FileInfo provides easy access to the components of a file's path relative to the project root.
src/tests/coding/cpplint.py:1550
↓ 9 callersClassLayerStoreData
src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:38
↓ 9 callersClassResidueModification
src/openms/include/OpenMS/CHEMISTRY/Residue.h:22
↓ 9 callersClassResult
src/openms/include/OpenMS/DATASTRUCTURES/FASTAContainer.h:320
↓ 9 callersClassStatement
src/openms/include/OpenMS/FORMAT/OMSFileStore.h:20
↓ 9 callersClassTestResult
A Result from a single test which either passed or failed. In addition, it contains information about the reason why the test failed, who is
tools/PythonExtensionChecker.py:792
↓ 8 callersClassAASequence
src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:24
↓ 8 callersClassCounter
Dict subclass for counting hashable objects. Sometimes called a bag or multiset. Elements are stored as dictionary keys and their counts are
src/pyOpenMS/tests/unittests/collections_.py:12
↓ 8 callersClassMSChromatogram
src/openms/include/OpenMS/QC/TIC.h:27
↓ 8 callersClassPeakFileOptions
src/openms/include/OpenMS/FORMAT/FileHandler.h:20
↓ 8 callersClassQString
src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/INIFileEditorWindow.h:23
↓ 8 callersClassString
src/openms/include/OpenMS/DATASTRUCTURES/StringUtils.h:29
↓ 8 callersClassTheoreticalSpectrumGenerator
src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAHelper.h:18
↓ 7 callersClassFASTAEntry
src/openms/include/OpenMS/FORMAT/FASTAFile.h:45
↓ 6 callersClassCVReference
src/openms/include/OpenMS/DATASTRUCTURES/CVMappings.h:19
↓ 6 callersClassDPosition
src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:28
↓ 6 callersClassFeatureFinder
forward declaration
src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderDefs.h:21
↓ 6 callersClassRM
src/tests/class_tests/openms/source/RangeManager_test.cpp:30
↓ 6 callersClassRowCompare
Comparison operator for sorting rows
src/openms/include/OpenMS/FORMAT/MzTab.h:205
↓ 6 callersClassTransformationDescription
src/openms/include/OpenMS/QC/RTAlignment.h:17
↓ 6 callersClassValue
src/tests/class_tests/openms/source/HashGrid_test.cpp:19
↓ 5 callersClassAreaIterator
src/openms/include/OpenMS/KERNEL/AreaIterator.h:35
↓ 5 callersClassExperimentalSettings
src/openms/include/OpenMS/FORMAT/SwathFile.h:22
↓ 5 callersClassFloatDataArray
Float data array class
src/openms/include/OpenMS/METADATA/DataArrays.h:19
↓ 5 callersClassMetaInfoInterface
src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h:31
↓ 5 callersClassProteinGroup
indistinguishable protein groups (size, nr targets, score)
src/openms/include/OpenMS/ANALYSIS/ID/IDBoostGraph.h:69
↓ 5 callersClassString
src/openms/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h:23
↓ 5 callersClassString
src/openms/include/OpenMS/METADATA/MetaInfo.h:21
↓ 5 callersClassString
src/openms/include/OpenMS/KERNEL/SpectrumHelper.h:18
↓ 5 callersEnumType
Actual file types enum.
src/openms/include/OpenMS/FORMAT/FileTypes.h:30
↓ 5 callersClassXLPrecursorComparator
comparator for sorting XLPrecursor vectors and using upper_bound and lower_bound using only a precursor mass * @brief The XLPrecursorComparator is a c
src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:204
↓ 5 callersEnumtype
src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:59
↓ 4 callersClassCLSMScoreComparator
* @brief Comparator to sort CrossLinkSpectrumMatches by the main score */
src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:159
↓ 4 callersClassControlledVocabulary
src/openms/include/OpenMS/FORMAT/VALIDATORS/MzMLValidator.h:16
↓ 4 callersClassDBoundingBox
src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:25
↓ 4 callersClassDIntervalBase
src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:29
↓ 4 callersClassDigestionEnzymeProtein
src/openms/include/OpenMS/CHEMISTRY/DecoyGenerator.h:17
↓ 4 callersClassDummy
src/tests/class_tests/openms/source/UniqueIdIndexer_test.cpp:27
↓ 4 callersClassInputFile
Information about input files that were processed
src/openms/include/OpenMS/METADATA/ID/InputFile.h:24
↓ 4 callersClassLockMass
helper class, describing a lock mass
src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h:48
↓ 4 callersClassMetaInfoRegistry
src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h:47
↓ 4 callersClassProgressLogger
src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLHandler.h:28
↓ 4 callersEnumSpectrumType
src/openms/include/OpenMS/METADATA/SpectrumSettings.h:44
↓ 4 callersClassTextFile
src/openms/include/OpenMS/FORMAT/ExperimentalDesignFile.h:19
↓ 4 callersClassWindowMower
src/openms/include/OpenMS/QC/FragmentMassError.h:20
↓ 3 callersEnumActivationMethod
Method of activation
src/openms/include/OpenMS/METADATA/Precursor.h:58
↓ 3 callersClassAssay
src/openms/include/OpenMS/METADATA/MSQuantifications.h:83
next →1–100 of 2,562, ranked by callers