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Functions500 in github.com/NinePts/OntoGraph

↓ 105 callersFunctiona
()
src/main/resources/static/lib/js/pace.min.js:2
↓ 99 callersMethodtoString
()
src/main/java/graph/OntoGraphException.java:32
↓ 55 callersMethodvalidateRequest
Validates that the user has provided correct input information. Mainly used to catch errors if REST processing is used independently from the browser.
src/main/java/graph/GraphRequestValidator.java:69
↓ 49 callersFunctionn
(a,b)
src/main/resources/static/lib/js/jquery.min.js:2
↓ 45 callersMethodvalidateString
Checks that a string is not null or empty, and matches one of a list of possible values @param checkString String to validate @param possibleValues
src/main/java/graph/GraphRequestValidator.java:355
↓ 33 callersMethodaddClass
Add all classes defined in the ontology. @param requestModel GraphRequestModel defining visualization settings @param ontologyPrefix String that is
src/main/java/graph/graphmloutputs/ClassesGraphCreation.java:130
↓ 32 callersFunctionadjustColorValue
(value)
src/main/resources/static/js/main.js:82
↓ 32 callersMethodvalidateColor
Validates that each color input is in hex color code format. @param color (String) being checked @param description (String) indicating the type of
src/main/java/graph/GraphRequestValidator.java:155
↓ 30 callersFunctiont
(t,r,e,u,i,o)
src/main/resources/static/lib/js/underscore-min.js:5
↓ 23 callersMethodcreateCustomPropertyGraphRequestModel
Creates a custom property GraphRequestModel with acceptable input @return GraphRequestModel
src/test/java/graph/ErrorTest.java:843
↓ 21 callersMethodprocessURIName
Cleans up URIs to use prefixes @param prefixes List<PrefixModel>, all prefixes in ontology with corresponding URI/IRIs @param fullName holding the fu
src/main/java/graph/GraphDBAccess.java:1535
↓ 19 callersMethodaddEdge
Add a specific edge in GraphML format. @param edgeDetails EdgeDetailsModel with info such as sourceArrow, edgeLabel, ... @param source String speci
src/main/java/graph/graphmloutputs/GraphMLOutputDetails.java:367
↓ 19 callersMethodcreateClassGraphRequestModel
Sets up a graph request for the specified test input (fileName) and vis. @param visualization (String) @param fileName (String) holding the RDF tri
src/test/java/graph/ClassGraphTest.java:405
↓ 19 callersMethodcreateCustomIndividualGraphRequestModel
Creates a custom individual GraphRequestModel (which should currently fail since "individual" is not an allowed graph type) @return GraphRequestModel
src/test/java/graph/ErrorTest.java:801
↓ 19 callersMethodcreateGraphMLAndCompareToMaster
Compares the test-generated GraphML output to the master reference for class graphs. @param GraphRequestModel GraphRequestModel @param fileName Str
src/test/java/graph/ClassGraphTest.java:446
↓ 18 callersFunctionadjustArrowValue
(value)
src/main/resources/static/js/main.js:62
↓ 17 callersFunctionx
(n,t,r)
src/main/resources/static/lib/js/underscore-min.js:5
↓ 16 callersFunctionadjustLineValue
(value)
src/main/resources/static/js/main.js:102
↓ 16 callersMethodcheckAttributeOrValue
Checks the value of a particular attribute, or the value of the element (if the attributeName parameter is empty). @param xmlDetails String holding
src/test/java/graph/TestUtils.java:154
↓ 16 callersFunctiontoggleDetails
(id1, id2, text)
src/main/resources/static/js/main.js:411
↓ 15 callersMethodcreateEdgeFlagsFalse
Creates an EdgeFlagsModel with all flags set to false. @return EdgeFlagsModel
src/main/java/graph/models/EdgeFlagsModel.java:52
↓ 15 callersMethodcreateGraphMLAndCompareToMaster
Compares the test-generated GraphML output to the master reference for property graphs. @param GraphRequestModel GraphRequestModel @param fileName
src/test/java/graph/PropertyGraphTest.java:365
↓ 15 callersMethodcreatePropertyGraphRequestModel
Sets up a graph request for the specified test input (fileName) and vis. @param visualization (String) @param fileName (String) holding the RDF tri
src/test/java/graph/PropertyGraphTest.java:382
↓ 15 callersFunctionea
(a,b)
src/main/resources/static/lib/js/jquery.min.js:3
↓ 15 callersFunctionk
(n)
src/main/resources/static/lib/js/underscore-min.js:5
↓ 15 callersFunctionmodelToGUI
(isNode, prefix)
src/main/resources/static/js/main.js:255
↓ 13 callersMethodcheckAdminConnection
Validates that the admin connection to Stardog is (still) in place. The connection may be lost if Stardog is restarted.
src/main/java/graph/GraphDBAccess.java:985
↓ 13 callersMethodcreateTypeAndValueModel
Creates an instance of the class, TypeAndValueModel. @param type String @param value String @return TypeAndValueModel
src/main/java/graph/models/TypeAndValueModel.java:47
↓ 12 callersFunctionJ
(a,b)
src/main/resources/static/lib/js/jquery.min.js:2
↓ 12 callersMethodcreateEntityAndRelatedNodesModel
Creates an instance of the class, EntityAndRelatedNodesModel. @param entityNode String @param relatedNode String @return EntityAndRelatedNodesModel
src/main/java/graph/models/EntityAndRelatedNodesModel.java:48
↓ 12 callersFunctione
(a,b)
src/main/resources/static/lib/js/jquery.min.js:4
↓ 11 callersFunctionb
(c,e)
src/main/resources/static/lib/js/jquery.min.js:2
↓ 11 callersMethodcreateMap
Creates a hash map from String/Object pairs. @param values Pairs of String key and Object values. The number of arguments should be even other
src/main/java/graph/GraphDBAccess.java:1109
↓ 11 callersMethoderror
(SAXParseException e)
src/test/java/graph/SAXErrorHandler.java:28
↓ 11 callersMethodgetPrefixedNameFromLabel
Gets the prefixed name from a label that is either in the form, prefixedName or label (prefixedName) @param label String @return prefix
src/main/java/graph/graphmloutputs/GraphMLUtils.java:527
↓ 10 callersMethodaddNode
Add a node in GraphML format. @param nodeDetails NodeDetailsModel with info such as nodeShape, fillColor, visualization, ... @param entityName Stri
src/main/java/graph/graphmloutputs/GraphMLOutputDetails.java:275
↓ 10 callersFunctionb
()
src/main/resources/static/lib/js/bootstrap.min.js:6
↓ 10 callersMethodcreateCustomRequestModel
Sets up a request model for a class graph with custom visualization details. Uses 'TestClassesB.ttl', which includes multiple nodes with multiple leve
src/test/java/graph/CustomizationTest.java:138
↓ 10 callersMethodcreateGraphMLAndCompareToMaster
Compares the test-generated GraphML output to the master reference for individual graphs. @param GraphRequestModel GraphRequestModel @param fileNam
src/test/java/graph/RDFGraphTest.java:335
↓ 10 callersMethodcreateRDFGraphRequestModel
Sets up a graph request for the specified test input (fileName) and vis. @param visualization (String) @param graphType (String) @param fileName (
src/test/java/graph/RDFGraphTest.java:353
↓ 10 callersFunctionha
(a)
src/main/resources/static/lib/js/jquery.min.js:2
↓ 10 callersFunctionia
(a)
src/main/resources/static/lib/js/jquery.min.js:2
↓ 9 callersMethodcreateCustomClassGraphRequestModel
Creates a custom class GraphRequestModel with acceptable input @return GraphRequestModel
src/test/java/graph/ErrorTest.java:738
↓ 9 callersMethodcreateNodeDetailsModel
Creates an instance of the class, NodeDetailsModel. @param requestModel GraphRequestModel @param typeOfNode String defining a "class" node, "indivi
src/main/java/graph/models/NodeDetailsModel.java:58
↓ 9 callersFunctiondisplayCustomization
(customizationType)
src/main/resources/static/js/main.js:158
↓ 9 callersMethodgraph
Gets user input (including the ontology details) and uses it to create GraphML output @param requestModel GraphRequestModel holding all details of th
src/main/java/graph/GraphController.java:141
↓ 8 callersMethodcreateGraphMLAndCompareToMaster
Compares the test-generated GraphML output to the master reference for individual graphs. @param GraphRequestModel GraphRequestModel @param fileNam
src/test/java/graph/IndividualGraphTest.java:223
↓ 8 callersMethodcreateIndividualGraphRequestModel
Sets up a graph request for the specified test input (fileName) and vis. @throws Exception (IOException, OntoGraphException, SAXException)
src/test/java/graph/IndividualGraphTest.java:236
↓ 8 callersFunctiond
(a)
src/main/resources/static/lib/js/jquery.min.js:4
↓ 8 callersFunctiong
()
src/main/resources/static/lib/js/jquery.min.js:3
↓ 8 callersMethodgetLineWidth
Gets an edge/line width as appropriate for the visualization @param visualization String @return lineWidth String
src/main/java/graph/graphmloutputs/GraphMLOutputDetails.java:674
↓ 8 callersFunctionh
(a,b,c)
src/main/resources/static/lib/js/jquery.min.js:2
↓ 8 callersFunctionm
(t,e,i,r)
src/main/resources/static/lib/js/backbone-min.js:1
↓ 8 callersFunctionr
(n,t,r)
src/main/resources/static/lib/js/underscore-min.js:5
↓ 7 callersFunctionCb
(a)
src/main/resources/static/lib/js/jquery.min.js:4
↓ 7 callersFunctionY
(a,b,c,d,e,f,g)
src/main/resources/static/lib/js/jquery.min.js:3
↓ 7 callersFunctionadjustNodeValue
(value)
src/main/resources/static/js/main.js:110
↓ 7 callersFunctioncancelCustomization
(customizationType)
src/main/resources/static/js/main.js:132
↓ 7 callersFunctionfa
(a,b,d,e)
src/main/resources/static/lib/js/jquery.min.js:2
↓ 7 callersMethodgetLabel
Gets the label for a class or property. @param name String defining the class or property @param label String indicating the current label, which m
src/main/java/graph/GraphDBAccess.java:1181
↓ 7 callersMethodgetLabelForDisplay
Returns the entity name, correctly formatted for the visualization. This is important since VOWL does not display/distinguish different prefix names,
src/main/java/graph/graphmloutputs/GraphMLUtils.java:475
↓ 7 callersMethodgetMaxLength
Gets the length of the longest string in an array as a double. @param list Array of Strings @param openingLine String defining any introductory tex
src/main/java/graph/graphmloutputs/GraphMLOutputDetails.java:692
↓ 7 callersFunctionk
()
src/main/resources/static/lib/js/jquery.min.js:3
↓ 7 callersFunctionna
(a)
src/main/resources/static/lib/js/jquery.min.js:2
↓ 7 callersMethodreadFile
Reads a file's contents to a base64 encoded string. @param path String defining the (absolute or relative) path to the file @return String base-64 e
src/test/java/graph/TestUtils.java:63
↓ 7 callersFunctionv
(a,b)
src/main/resources/static/lib/js/jquery.min.js:2
↓ 7 callersFunctiony
(b,c,d,e)
src/main/resources/static/lib/js/jquery.min.js:4
↓ 6 callersMethodaddClassOrInstance
Calculate the box sizes for a class or individual with its datatype properties/attributes, and return the GraphML details for it. @param entityName
src/main/java/graph/graphmloutputs/UMLGraphCreation.java:292
↓ 6 callersMethodaddRelated
Add the equivalentClasses, disjointWiths and oneOfs definitions to the graph. @param requestModel GraphRequestModel @param classes List<ClassModel>
src/main/java/graph/graphmloutputs/GraphMLUtils.java:203
↓ 6 callersMethodgetNodeDetails
Returns the appropriate modelName, modelPosition, border width, width, height, ... for a node, which is based on a visualization @param nodeDetails
src/main/java/graph/graphmloutputs/GraphMLOutputDetails.java:722
↓ 6 callersMethodreplaceBrackets
Replaces any angle brackets in a node/edge/box/... label with &gt/lt; alternatives @param labelText String @return String of the updated labelText (
src/main/java/graph/graphmloutputs/GraphMLOutputDetails.java:1090
↓ 6 callersMethodtestGraphMLOutput
Tests the GraphML output string for common problems and expected attribute and element values. @param directoryPrefix String (e.g., "class" or "cust
src/test/java/graph/TestUtils.java:99
↓ 6 callersFunctionu
(a,b,c)
src/main/resources/static/lib/js/jquery.min.js:2
↓ 6 callersMethodupdateRelationMap
Updates the hash map of equivalentsDisjointsOneOfs or connectives @param prefixes List<PrefixModel> which may be updated if the key or value uses a n
src/main/java/graph/GraphDBAccess.java:1636
↓ 6 callersFunctionz
(a,b,c)
src/main/resources/static/lib/js/jquery.min.js:2
↓ 5 callersFunctionHSV_RGB
(h, s, v)
src/main/resources/static/lib/js/jscolor.js:1330
↓ 5 callersFunctionHa
(a,b,c,d)
src/main/resources/static/lib/js/jquery.min.js:3
↓ 5 callersFunctionM
(a)
src/main/resources/static/lib/js/jquery.min.js:2
↓ 5 callersFunctionS
(n,t,r,e)
src/main/resources/static/lib/js/underscore-min.js:5
↓ 5 callersFunctionb
(n,t,r)
src/main/resources/static/lib/js/underscore-min.js:5
↓ 5 callersMethodblankNodeProcessing
Processing to display the semantics of a blank node (a union, intersection or complement of other classes/blank nodes). @param requestModel GraphReq
src/main/java/graph/graphmloutputs/GraphMLUtils.java:344
↓ 5 callersFunctionc
(a)
src/main/resources/static/lib/js/jquery.min.js:3
↓ 5 callersMethodcreateGraphMLAndCompareToMaster
Compares the test-generated GraphML output to the master reference for class graphs. @param GraphRequestModel GraphRequestModel @param fileName Str
src/test/java/graph/ClassAndPropertyGraphTest.java:223
↓ 5 callersMethodcreateGraphRequestModel
Sets up a graph request for the specified test input (fileName) and visualization. @param visualization (String) @param fileName (String) holding t
src/test/java/graph/ClassAndPropertyGraphTest.java:164
↓ 5 callersFunctionf
(t,e,r,n,s)
src/main/resources/static/lib/js/backbone-min.js:1
↓ 5 callersFunctiongenerateGraph
()
src/main/resources/static/js/main.js:211
↓ 5 callersMethodgetSuperClasses
Gets all the superclasses for a class. @param snarlTemplate SnarlTemplate @param prefixes List<String> defining the current prefixes @param fullCl
src/main/java/graph/GraphDBAccess.java:1201
↓ 5 callersFunctionja
(a,b)
src/main/resources/static/lib/js/jquery.min.js:2
↓ 5 callersFunctionra
(a,b,c)
src/main/resources/static/lib/js/jquery.min.js:2
↓ 5 callersMethodresetEdgeDetails
Update edgeDetails for an edge connecting two blank nodes representing either union, complement or intersection. @param edgeDetails EdgeDetailsModel
src/main/java/graph/graphmloutputs/GraphMLOutputDetails.java:986
↓ 5 callersFunctionsa
(a)
src/main/resources/static/lib/js/jquery.min.js:2
↓ 5 callersMethodupdateMapValue
Either creates a new entry in the hash map if the key does not exist, or adds the value to the existing value. @param holdingMap HashMap<String, List
src/main/java/graph/GraphDBAccess.java:1653
↓ 4 callersFunctionB
(t,e)
src/main/resources/static/lib/js/backbone-min.js:1
↓ 4 callersFunctionF
(a,b)
src/main/resources/static/lib/js/jquery.min.js:2
↓ 4 callersFunctionI
(t,e,i)
src/main/resources/static/lib/js/backbone-min.js:1
↓ 4 callersFunctionMa
(a)
src/main/resources/static/lib/js/jquery.min.js:3
↓ 4 callersFunctionW
(a,b)
src/main/resources/static/lib/js/jquery.min.js:3
↓ 4 callersMethodaddGraffooIndividualOrNode
Add a node for a Graffoo individual or equivalent or disjoint node class @param isClassRestriction boolean indicating that a note is displayed (this
src/main/java/graph/graphmloutputs/GraphMLOutputDetails.java:850
↓ 4 callersMethodaddImageResource
Adds an image resource to the graphML @param resourceType String @return graphML String @throws IOException
src/main/java/graph/graphmloutputs/GraphMLOutputDetails.java:1002
↓ 4 callersMethodaddPropertyModels
Gets all datatype, object or annotation properties and their details. @param snarlTemplate @param prefixes List<PrefixModel> which may be updated i
src/main/java/graph/GraphDBAccess.java:889
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