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Functions43 in github.com/MSKCC-Computational-Pathology/MIL-nature-medicine-2019

⨍ Functions 43◇ Types & classes 8
↓ 3 callersMethodsetmode
(self,mode)
MIL_train.py:190
↓ 2 callersMethod__init__
(self, path, s, shuffle=False, transform=None)
RNN_test.py:129
↓ 2 callersMethod__init__
(self, path, s, shuffle=False, transform=None)
RNN_train.py:211
↓ 2 callersFunctionerrors
(output, target)
RNN_train.py:160
↓ 2 callersFunctioninference
(run, loader, model)
MIL_train.py:108
↓ 2 callersMethodinit_hidden
(self, batch_size)
RNN_train.py:206
↓ 1 callersFunctioncalc_err
(pred,real)
MIL_train.py:133
↓ 1 callersFunctiongroup_argtopk
(groups, data,k=1)
MIL_train.py:142
↓ 1 callersFunctiongroup_max
(groups, data, nmax)
MIL_train.py:151
↓ 1 callersFunctiongroup_max
(groups, data, nmax)
MIL_test.py:68
↓ 1 callersFunctioninference
(loader, model)
MIL_test.py:57
↓ 1 callersMethodinit_hidden
(self, batch_size)
RNN_test.py:124
↓ 1 callersFunctionmain
()
RNN_test.py:27
↓ 1 callersFunctionmain
()
RNN_train.py:31
↓ 1 callersFunctionmain
()
MIL_train.py:29
↓ 1 callersFunctionmain
()
MIL_test.py:24
↓ 1 callersMethodmaketraindata
(self, idxs)
MIL_train.py:192
↓ 1 callersMethodsetmode
(self,mode)
MIL_test.py:107
↓ 1 callersMethodshuffletraindata
(self)
MIL_train.py:194
↓ 1 callersFunctiontest_single
(embedder, rnn, loader)
RNN_test.py:66
↓ 1 callersFunctiontest_single
(epoch, embedder, rnn, loader, criterion)
RNN_train.py:128
↓ 1 callersFunctiontrain
(run, loader, model, criterion, optimizer)
MIL_train.py:119
↓ 1 callersFunctiontrain_single
(epoch, embedder, rnn, loader, criterion, optimizer)
RNN_train.py:94
Method__getitem__
(self,index)
RNN_test.py:150
Method__getitem__
(self,index)
RNN_train.py:232
Method__getitem__
(self,index)
MIL_train.py:196
Method__getitem__
(self,index)
MIL_test.py:113
Method__init__
(self, path)
RNN_test.py:89
Method__init__
(self, ndims)
RNN_test.py:106
Method__init__
(self, path)
RNN_train.py:171
Method__init__
(self, ndims)
RNN_train.py:188
Method__init__
(self, libraryfile='', transform=None)
MIL_train.py:164
Method__init__
(self, libraryfile='', transform=None)
MIL_test.py:81
Method__len__
(self)
RNN_test.py:169
Method__len__
(self)
RNN_train.py:251
Method__len__
(self)
MIL_train.py:214
Method__len__
(self)
MIL_test.py:131
Methodforward
(self,x)
RNN_test.py:99
Methodforward
(self, input, state)
RNN_test.py:117
Methodforward
(self,x)
RNN_train.py:181
Methodforward
(self, input, state)
RNN_train.py:199
Methodmaketraindata
(self, idxs)
MIL_test.py:109
Methodshuffletraindata
(self)
MIL_test.py:111