Functions — github.com/GraphChi/graphchi-java

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Functions1,057 in github.com/GraphChi/graphchi-java

⨍ Functions 1,057◇ Types & classes 152

↓ 2 callersMethoddetermineNextWindow

(int subIntervalStart, int maxVertex)

src/main/java/edu/cmu/graphchi/engine/GraphChiEngine.java:773

↓ 2 callersMethoddrainBuffer

(int sourceIdx)

src/main/java/edu/cmu/graphchi/walks/distributions/DrunkardCompanion.java:288

↓ 2 callersMethodendIteration

Called when an iteration ends @param ctx

src/main/java/edu/cmu/graphchi/GraphChiProgram.java:46

↓ 2 callersMethodendSubInterval

(GraphChiContext ctx, VertexInterval interval)

src/main/java/edu/cmu/graphchi/GraphChiProgram.java:69

↓ 2 callersMethodensureExists

(int firstKey, int secondKey)

src/main/java/edu/cmu/graphchi/walks/distributions/TwoKeyCompanion.java:251

↓ 2 callersMethodexpandArrays

()

src/main/java/edu/cmu/graphchi/walks/LocalWalkBuffer.java:19

↓ 2 callersMethodfromString

(String s)

src/main/java/edu/cmu/graphchi/preprocessing/VertexIdTranslate.java:64

↓ 2 callersMethodgenerateRandomHopsAliasMethod

(Random r, ChiVertex<VT, Float> vertex, int n, EdgeDirection edgeDir,

src/main/java/edu/cmu/graphchi/walks/WeightedHopper.java:53

↓ 2 callersMethodgenerateRandomHopsOut

(Random r, ChiVertex<VT, Float> vertex, int n)

src/main/java/edu/cmu/graphchi/walks/WeightedHopper.java:18

↓ 2 callersMethodgetContext

@return the current GraphChiContext object

src/main/java/edu/cmu/graphchi/engine/GraphChiEngine.java:686

↓ 2 callersMethodgetCurInterval

@return Current interval of vertices being worked on.

src/main/java/edu/cmu/graphchi/GraphChiContext.java:35

↓ 2 callersMethodgetDirnameShardEdataBlock

(String edataShardName, int blocksize)

src/main/java/edu/cmu/graphchi/ChiFilenames.java:41

↓ 2 callersMethodgetGraphInfo

()

src/main/java/edu/cmu/graphchi/apps/ALSMatrixFactorization.java:265

↓ 2 callersMethodgetIteration

@return the current iteration (starts from 0)

src/main/java/edu/cmu/graphchi/GraphChiContext.java:46

↓ 2 callersMethodgetNumRows

()

src/main/java/edu/cmu/graphchi/util/HugeLongMatrix.java:47

↓ 2 callersMethodgetNumShards

()

src/main/java/edu/cmu/graphchi/preprocessing/VertexIdTranslate.java:56

↓ 2 callersMethodgetRow

(int row, double[] arr)

src/main/java/edu/cmu/graphchi/util/HugeDoubleMatrix.java:101

↓ 2 callersMethodgetSource

()

src/main/java/edu/cmu/graphchi/walks/analysis/WalkPathAnalyzerTemplate.java:198

↓ 2 callersMethodgetSourceVertex

(int walk)

src/main/java/edu/cmu/graphchi/walks/IntWalkManager.java:351

↓ 2 callersMethodgetStreamingOffset

()

src/main/java/edu/cmu/graphchi/shards/MemoryShard.java:365

↓ 2 callersMethodgetStreamingOffsetEdgePtr

()

src/main/java/edu/cmu/graphchi/shards/MemoryShard.java:369

↓ 2 callersMethodgetStreamingOffsetVid

()

src/main/java/edu/cmu/graphchi/shards/MemoryShard.java:373

↓ 2 callersMethodgetThreadLocal

()

src/main/java/edu/cmu/graphchi/GraphChiContext.java:107

↓ 2 callersMethodgetValue

Access the value of a vertex

src/main/java/edu/cmu/graphchi/ChiVertex.java:123

↓ 2 callersMethodgetValue

(byte[] array)

src/main/java/edu/cmu/graphchi/datablocks/FloatConverter.java:28

↓ 2 callersMethodgetValue

()

src/main/java/edu/cmu/graphchi/util/IdFloat.java:21

↓ 2 callersMethodgetVertexId

()

src/main/java/edu/cmu/graphchi/util/IdFloat.java:17

↓ 2 callersMethodinitVertices

(int nvertices, int firstVertexId, ChiVertex<VertexDataType, EdgeDataType>[] vertices)

src/main/java/edu/cmu/graphchi/engine/GraphChiEngine.java:579

↓ 2 callersMethodinitializeGraph

(Collection<Integer> circleOfTrust)

src/main/java/edu/cmu/graphchi/apps/recommendations/CircleOfTrustSalsa.java:72

↓ 2 callersMethodinsertMultiple

(ArrayList<Integer> arr, int val, int n)

test/edu/cmu/graphchi/walks/distribution/TestDiscreteDistribution.java:126

↓ 2 callersMethodisCompressionEnabled

()

src/main/java/edu/cmu/graphchi/io/CompressedIO.java:68

↓ 2 callersMethodisLastIteration

()

src/main/java/edu/cmu/graphchi/GraphChiContext.java:103

↓ 2 callersMethodloadAdjChunk

(int windowStart, int windowEnd, ChiVertex[] vertices, boolean disableOutEdges, DataInput compressedInput, int

src/main/java/edu/cmu/graphchi/shards/MemoryShard.java:188

↓ 2 callersMethodloadBeforeUpdates

(int interval, final ChiVertex<VertexDataType, EdgeDataType>[] vertices, final MemoryShard<EdgeDataType> memS

src/main/java/edu/cmu/graphchi/engine/GraphChiEngine.java:610

↓ 2 callersMethodloadVertices

(final int windowStart, final int windowEnd, final ChiVertex[] vertices, final boolean disableOutEdges, final

src/main/java/edu/cmu/graphchi/shards/MemoryShard.java:130

↓ 2 callersMethodlog

(String s)

src/main/java/edu/cmu/graphchi/walks/WalkManager.java:67

↓ 2 callersMethodmergeWith

(int firstKey, int secondKey, DiscreteDistribution distr)

src/main/java/edu/cmu/graphchi/walks/distributions/TwoKeyCompanion.java:290

↓ 2 callersMethodmoveWalkUnsafe

(int walk, int toVertex, boolean trackBit)

src/main/java/edu/cmu/graphchi/walks/IntWalkManager.java:91

↓ 2 callersMethodmoveWalkUnsafe

(long walk, int toVertex, boolean trackBit)

src/main/java/edu/cmu/graphchi/walks/LongWalkManager.java:91

↓ 2 callersMethodnext

()

src/main/java/edu/cmu/graphchi/vertexdata/VertexAggregator.java:116

↓ 2 callersMethodprint

()

src/main/java/edu/cmu/graphchi/walks/distributions/DiscreteDistribution.java:58

↓ 2 callersMethodprocess

Final processing after all edges have been received. @throws IOException

src/main/java/edu/cmu/graphchi/preprocessing/FastSharder.java:254

↓ 2 callersMethodprocessFile

(FileSystem fs, Path inputPath)

src/main/java/edu/cmu/graphchi/hadoop/HDFSGraphLoader.java:52

↓ 2 callersMethodprocessWalksFromSource

(int source, ArrayList<Walk> walksFromSource)

src/main/java/edu/cmu/graphchi/walks/analysis/WalkPathAnalyzerTemplate.java:117

↓ 2 callersMethodquery

(Collection<Integer> queryIds)

src/main/java/edu/cmu/graphchi/queries/VertexQuery.java:284

↓ 2 callersMethodreadBytes

Read up to <code>len</code> bytes into an array, at a specified offset. This will block until at least one byte has been read. @param b the byte ar

src/main/java/ucar/unidata/io/RandomAccessFile.java:536

↓ 2 callersMethodreadFully

(byte[] b)

src/main/java/nom/tam/util/BufferedDataInputStream.java:213

↓ 2 callersMethodreadInt

()

src/main/java/nom/tam/util/BufferedDataInputStream.java:120

↓ 2 callersMethodreadIntReversed

()

src/main/java/nom/tam/util/BufferedDataInputStream.java:133

↓ 2 callersMethodreadLong

Reads a signed 64-bit integer from this file. This method reads eight bytes from the file. If the bytes read, in order, are <code>b1</code>, <code>b2<

src/main/java/ucar/unidata/io/RandomAccessFile.java:1184

↓ 2 callersMethodreadNextVertices

(ChiVertex[] vertices, int start, boolean disableWrites)

src/main/java/edu/cmu/graphchi/shards/SlidingShard.java:125

↓ 2 callersMethodreadNow

()

src/main/java/edu/cmu/graphchi/shards/SlidingShard.java:317

↓ 2 callersMethodreadToString

Reads file completely and returns the contents as a string. @param fileName @return file contents @throws IOException

src/main/java/edu/cmu/graphchi/util/FileUtils.java:18

↓ 2 callersMethodreceiveEdge

(int from, int to, String token)

src/main/java/edu/cmu/graphchi/preprocessing/EdgeProcessor.java:10

↓ 2 callersMethodrelease

(int blockId)

src/main/java/edu/cmu/graphchi/datablocks/DataBlockManager.java:76

↓ 2 callersMethodreleasePriorToOffset

(boolean all, boolean disableWrites)

src/main/java/edu/cmu/graphchi/shards/SlidingShard.java:228

↓ 2 callersMethodremoveAllTasks

()

src/main/java/edu/cmu/graphchi/Scheduler.java:27

↓ 2 callersMethodreset

Reset the "hasNewTasks" counter, but does not clear the bits.

src/main/java/edu/cmu/graphchi/engine/BitsetScheduler.java:105

↓ 2 callersMethodrun

(String graphName, int numShards)

src/main/java/com/twitter/pers/bipartite/HITSSmallMem.java:170

↓ 2 callersMethodrun

(String graphName, int numShards)

src/main/java/com/twitter/pers/bipartite/SALSASmallMem.java:134

↓ 2 callersMethodrun

()

src/main/java/edu/cmu/graphchi/apps/recommendations/TwitterWTF.java:147

↓ 2 callersMethodsetDataPtr

(ChiPointer vertexPtr)

src/main/java/edu/cmu/graphchi/ChiVertex.java:115

↓ 2 callersMethodsetEdataConverter

Configure edge data type converter - if you need edge values @param edataConverter

src/main/java/edu/cmu/graphchi/walks/DrunkardMobEngine.java:77

↓ 2 callersMethodsetModifiesOutedges

(boolean modifiesOutedges)

src/main/java/edu/cmu/graphchi/shards/SlidingShard.java:282

↓ 2 callersMethodsetScheduler

(Scheduler scheduler)

src/main/java/edu/cmu/graphchi/engine/GraphChiEngine.java:1032

↓ 2 callersMethodsetValue

(byte[] array, Float val)

src/main/java/edu/cmu/graphchi/datablocks/FloatConverter.java:33

↓ 2 callersMethodsetVertexDataConverter

Configure vertex data type converter - if you need vertex values @param vertexDataConverter

src/main/java/edu/cmu/graphchi/walks/DrunkardMobEngine.java:90

↓ 2 callersMethodsetVertexIdTranslate

(VertexIdTranslate vertexIdTranslate)

src/main/java/edu/cmu/graphchi/engine/GraphChiEngine.java:1007

↓ 2 callersMethodshovelFilename

(int i)

src/main/java/edu/cmu/graphchi/preprocessing/FastSharder.java:136

↓ 2 callersMethodskip

(int n)

src/main/java/edu/cmu/graphchi/shards/SlidingShard.java:115

↓ 2 callersMethodstartWriting

(File file, boolean append)

src/main/java/edu/cmu/graphchi/apps/kcore/GraphTransformer.java:41

↓ 2 callersMethodstopWriting

()

src/main/java/edu/cmu/graphchi/apps/kcore/GraphTransformer.java:46

↓ 2 callersMethodstringRepresentation

()

src/main/java/edu/cmu/graphchi/preprocessing/VertexIdTranslate.java:60

↓ 2 callersMethodtopAuthorities

Return top K authorities (result from SALSA), but do not include users in the removeList @param K @param removeList @return

src/main/java/edu/cmu/graphchi/apps/recommendations/CircleOfTrustSalsa.java:222

↓ 2 callersMethodvertexShovelFileName

(int i)

src/main/java/edu/cmu/graphchi/preprocessing/FastSharder.java:140

↓ 2 callersMethodwriteBytes

Write <code>len</code> bytes from an array to the file. @param b the array containing the data. @param off the offset in the array to the data. @pa

src/main/java/ucar/unidata/io/RandomAccessFile.java:812

↓ 1 callersMethod_processWalks

(WalkArray walkArray, int[] atVertices)

src/main/java/edu/cmu/graphchi/walks/distributions/TwoKeyCompanion.java:327

↓ 1 callersMethod_processWalks

(WalkArray walkArray, int[] atVertices)

src/main/java/edu/cmu/graphchi/walks/distributions/DrunkardCompanion.java:273

↓ 1 callersMethodaddAllTasks

()

src/main/java/edu/cmu/graphchi/Scheduler.java:21

↓ 1 callersMethodaddEdges

(int[] from, int[] to)

src/main/java/com/twitter/pers/graph_generator/GraphOutput.java:8

↓ 1 callersMethodaddLocalBuffer

(LocalWalkBuffer buf)

src/main/java/edu/cmu/graphchi/walks/DrunkardDriver.java:130

↓ 1 callersMethodaddToShovel

Adds n edge to the shovel. At this stage, the vertex-ids are "pretranslated" to a temporary internal ids. In the last phase, each vertex-id is assign

src/main/java/edu/cmu/graphchi/preprocessing/FastSharder.java:192

↓ 1 callersMethodaddVertexValue

We keep separate shovel-file for vertex-values. @param shard @param pretranslatedVertexId @param value @throws IOException

src/main/java/edu/cmu/graphchi/preprocessing/FastSharder.java:224

↓ 1 callersMethodaddWalk

(short hop, int atVertex)

src/main/java/edu/cmu/graphchi/walks/analysis/WalkPathAnalyzerTemplate.java:193

↓ 1 callersMethodanalyze

Currently very dummy implementation. TODO: Make memory efficient and smarter in general. Just for demonstration purposes.

src/main/java/edu/cmu/graphchi/walks/analysis/WalkPathAnalyzerTemplate.java:46

↓ 1 callersMethodanyVertexScheduled

(int subIntervalStart, int lastVertex)

src/main/java/edu/cmu/graphchi/engine/GraphChiEngine.java:457

↓ 1 callersMethodcalc_validation_rmse

(String baseFilename, int nShards)

src/main/java/edu/cmu/graphchi/toolkits/collaborative_filtering/RMSEEngine.java:82

↓ 1 callersMethodcallback

Called for each vertex @param vertexId @param vertexValue

src/main/java/edu/cmu/graphchi/vertexdata/ForeachCallback.java:15

↓ 1 callersMethodcheckCurblock

(int toread)

src/main/java/edu/cmu/graphchi/shards/SlidingShard.java:86

↓ 1 callersMethodclearMemory

()

src/main/java/edu/cmu/graphchi/walks/distributions/TwoKeyCompanion.java:425

↓ 1 callersMethodclose

()

src/main/java/edu/cmu/graphchi/walks/distributions/DrunkardCompanion.java:358

↓ 1 callersMethodcommit

(Block b, boolean synchronously, boolean disableWrites)

src/main/java/edu/cmu/graphchi/shards/SlidingShard.java:271

↓ 1 callersMethodcommitAndRelease

(boolean modifiesInedges, boolean modifiesOutedges)

src/main/java/edu/cmu/graphchi/shards/MemoryShard.java:85

↓ 1 callersMethodcommitAsync

()

src/main/java/edu/cmu/graphchi/shards/SlidingShard.java:328

↓ 1 callersMethodcompactMemoryUsage

Removes tails from distributions to save memory

src/main/java/edu/cmu/graphchi/walks/distributions/TwoKeyCompanion.java:138

↓ 1 callersMethodcompactMemoryUsage

Removes tails from distributions to save memory

src/main/java/edu/cmu/graphchi/walks/distributions/DrunkardCompanion.java:117

↓ 1 callersMethodcomputeLabels

Analyzes the labels of the vertices and outputs a file baseFilename + ".components" with label,count. Singletons labels not listed. @param baseFilena

src/main/java/edu/cmu/graphchi/util/LabelAnalysis.java:34

↓ 1 callersMethodcomputeLeastValue

Computes the greatest x among a list of values, such that at least x values are greater than x For now, the array is instantiated and filled up elsewh

src/main/java/edu/cmu/graphchi/apps/kcore/KCoreDecomposer.java:134

↓ 1 callersMethodcomputeRecs

(RemoteDrunkardCompanion companion, int circleOfTrustSize, long startTime, CircleOfTrustSalsa csalsa, AtomicIn

src/main/java/edu/cmu/graphchi/apps/recommendations/TwitterWTF.java:174

↓ 1 callersMethodcomputeVertexDegrees

Compute vertex degrees by running a special graphchi program. This is done only if we do not have enough memory to keep track of vertex degrees in-mem

src/main/java/edu/cmu/graphchi/preprocessing/FastSharder.java:808

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