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Functions1,057 in github.com/GraphChi/graphchi-java

↓ 5 callersMethodfromFile
(File f)
src/main/java/edu/cmu/graphchi/preprocessing/VertexIdTranslate.java:84
↓ 5 callersMethodgetBlocksize
(int sizeOf)
src/main/java/edu/cmu/graphchi/ChiFilenames.java:77
↓ 5 callersMethodgetFilenameOfDegreeData
(String baseFilename, boolean sparse)
src/main/java/edu/cmu/graphchi/ChiFilenames.java:33
↓ 5 callersMethodgetNumLeft
()
src/main/java/edu/cmu/graphchi/apps/ALSMatrixFactorization.java:287
↓ 5 callersMethodgetPath
()
src/main/java/edu/cmu/graphchi/walks/analysis/WalkPathAnalyzerTemplate.java:206
↓ 5 callersMethodgetTop
(int topN)
src/main/java/edu/cmu/graphchi/walks/distributions/DiscreteDistribution.java:64
↓ 5 callersMethodgetVertexValuePtr
(int vertexId, int blockId)
src/main/java/edu/cmu/graphchi/engine/auxdata/VertexData.java:217
↓ 5 callersMethodreadFully
Reads <code>b.length</code> bytes from this file into the byte array. This method reads repeatedly from the file until all the bytes are read. This me
src/main/java/ucar/unidata/io/RandomAccessFile.java:698
↓ 5 callersMethodsetBlockManager
(DataBlockManager blockManager)
src/main/java/edu/cmu/graphchi/engine/auxdata/VertexData.java:230
↓ 5 callersMethodsetEnableDeterministicExecution
Enabled or disables the deterministic parallelism. It is enabled by default. See http://code.google.com/p/graphchi/wiki/IntroductionToGraphChi section
src/main/java/edu/cmu/graphchi/engine/GraphChiEngine.java:864
↓ 5 callersMethodsetModifiesOutedges
(boolean modifiesOutedges)
src/main/java/edu/cmu/graphchi/engine/GraphChiEngine.java:896
↓ 5 callersMethodsetStatusString
(String status)
src/main/java/edu/cmu/graphchi/hadoop/PigGraphChiBase.java:90
↓ 4 callersMethodaddJob
Adds a random walk job. Use run() to run all the jobs. @param edgeDirection which direction edges need to be considered @param callback your walk log
src/main/java/edu/cmu/graphchi/walks/DrunkardMobEngine.java:101
↓ 4 callersMethodaddWalkBatch
Add a set of walks from a source. Note, you must add the walks in sorted order! @param vertex source vertex @param numWalks @return
src/main/java/edu/cmu/graphchi/walks/WalkManager.java:101
↓ 4 callersMethodcurrentIterator
()
src/main/java/edu/cmu/graphchi/engine/auxdata/VertexData.java:240
↓ 4 callersMethodforwardWalkTo
Moves walk to next vertex @param walk walk identified @param destinationVertex vertex id to move hte walk to @param trackBit set to true if this walk
src/main/java/edu/cmu/graphchi/walks/IntDrunkardContext.java:14
↓ 4 callersMethodgetDestination
()
src/main/java/edu/cmu/graphchi/walks/analysis/WalkPathAnalyzerTemplate.java:202
↓ 4 callersMethodgetFilePointer
Returns the current position in the file, where the next read or write will occur. @return the offset from the start of the file in bytes. @throws IO
src/main/java/ucar/unidata/io/RandomAccessFile.java:406
↓ 4 callersMethodgetFilenameShardEdata
(String baseFilename, BytesToValueConverter valueConv, int p, int nShards)
src/main/java/edu/cmu/graphchi/ChiFilenames.java:61
↓ 4 callersMethodgetFirst
(long l)
src/main/java/edu/cmu/graphchi/preprocessing/FastSharder.java:242
↓ 4 callersMethodgetNumVertices
@return the total number of vertices in the current graph
src/main/java/edu/cmu/graphchi/GraphChiContext.java:91
↓ 4 callersMethodgetOutEdgeValue
Returns the value of i'th outedge (short-cut to outEdge(i)->getValue()) @param i @return the value of i'th outedge (short-cut to outEdge(i)->getValue
src/main/java/edu/cmu/graphchi/ChiVertex.java:304
↓ 4 callersMethodgetRow
(int row, long[] arr)
src/main/java/edu/cmu/graphchi/util/HugeLongMatrix.java:85
↓ 4 callersMethodgetRowAsVector
(int row)
src/main/java/edu/cmu/graphchi/util/HugeDoubleMatrix.java:108
↓ 4 callersMethodgetSecond
(long l)
src/main/java/edu/cmu/graphchi/preprocessing/FastSharder.java:246
↓ 4 callersMethodgetTotalWalks
()
src/main/java/edu/cmu/graphchi/walks/WalkManager.java:123
↓ 4 callersMethodgetValue
(int row, int col)
src/main/java/edu/cmu/graphchi/util/HugeDoubleMatrix.java:56
↓ 4 callersMethodisWalkStartedFromVertex
Returns true if walk was started from the vertex
src/main/java/edu/cmu/graphchi/walks/IntDrunkardContext.java:28
↓ 4 callersMethodmoveWalk
@param sourceId @param toVertex @param trackBit true if odd, false if even hop
src/main/java/edu/cmu/graphchi/walks/IntWalkManager.java:84
↓ 4 callersMethodmoveWalk
@param sourceId @param toVertex @param trackBit true if odd, false if even hop
src/main/java/edu/cmu/graphchi/walks/LongWalkManager.java:84
↓ 4 callersMethodnumEdges
@return the number of in- and out-edges
src/main/java/edu/cmu/graphchi/ChiVertex.java:280
↓ 4 callersMethodpackEdges
Bit arithmetic for packing two 32-bit vertex-ids into one 64-bit long. @param a @param b @return
src/main/java/edu/cmu/graphchi/preprocessing/FastSharder.java:238
↓ 4 callersMethodprocessWalks
(WalkArray walks, int[] atVertices)
src/main/java/edu/cmu/graphchi/walks/distributions/RemoteDrunkardCompanion.java:24
↓ 4 callersMethodqueryOutNeighbors
Queries out=neighbors for a given set of vertices. @param queryVertices @return
src/main/java/edu/cmu/graphchi/queries/VertexQuery.java:100
↓ 4 callersMethodrandomize
Randomize the content with numbers between from and to @param from min value @param to max value
src/main/java/edu/cmu/graphchi/util/HugeFloatMatrix.java:166
↓ 4 callersMethodresetWalk
(int walk, boolean trackBit)
src/main/java/edu/cmu/graphchi/walks/IntDrunkardContext.java:16
↓ 4 callersMethodsetDisableInedges
(boolean b)
src/main/java/edu/cmu/graphchi/engine/GraphChiEngine.java:913
↓ 4 callersMethodsetSkipZeroDegreeVertices
You can instruct the engine to automatically ignore vertices that do not have any edges. By default this is <b>false</b>. @param skipZeroDegreeVertice
src/main/java/edu/cmu/graphchi/engine/GraphChiEngine.java:161
↓ 4 callersMethodsetValue
(int row, int col, double val)
src/main/java/edu/cmu/graphchi/util/HugeDoubleMatrix.java:63
↓ 4 callersMethodsize
()
src/main/java/edu/cmu/graphchi/util/IntegerBuffer.java:25
↓ 4 callersMethodtoIntArray
(ArrayList<Integer> arr)
test/edu/cmu/graphchi/walks/distribution/TestDiscreteDistribution.java:77
↓ 4 callersMethodupdate
Called for every (scheduled) vertex @param vertex the current vertex @param context context representing the current state of the computation
src/main/java/edu/cmu/graphchi/GraphChiProgram.java:33
↓ 4 callersMethodvertexIterator
Returns an iterator to vertices. Vertices are iterated in their internal-order, but the iterator elements have the original ids. @param numVertices nu
src/main/java/edu/cmu/graphchi/vertexdata/VertexAggregator.java:83
↓ 4 callersMethodwriteByte
Writes a <code>byte</code> to the file as a 1-byte value. @param v a <code>byte</code> value to be written. @throws IOException if an I/O error occur
src/main/java/ucar/unidata/io/RandomAccessFile.java:1460
↓ 4 callersMethodwriteCompressed
(File f, byte[] data, int nbytes)
src/main/java/edu/cmu/graphchi/io/CompressedIO.java:50
↓ 3 callersMethodaddOutEdge
INTERNAL USE ONLY (TODO: separate better)
src/main/java/edu/cmu/graphchi/ChiVertex.java:204
↓ 3 callersMethodclone
(int _threadId)
src/main/java/edu/cmu/graphchi/GraphChiContext.java:139
↓ 3 callersMethodclose
Close the file, and release any associated system resources. @throws IOException if an I/O error occurrs.
src/main/java/ucar/unidata/io/RandomAccessFile.java:317
↓ 3 callersMethodflush
Copy the contents of the buffer to the disk. @throws IOException if an I/O error occurs.
src/main/java/ucar/unidata/io/RandomAccessFile.java:462
↓ 3 callersMethodgetDegree
Returns degree of a vertex. The vertex must be in the previous interval loaded using load(). @param vertexId id of the vertex @return VertexDegree ob
src/main/java/edu/cmu/graphchi/engine/auxdata/DegreeData.java:133
↓ 3 callersMethodgetNumIterations
@return the total number of iterations
src/main/java/edu/cmu/graphchi/GraphChiContext.java:57
↓ 3 callersMethodgetNumRight
()
src/main/java/edu/cmu/graphchi/apps/ALSMatrixFactorization.java:291
↓ 3 callersMethodgetShardEdataSize
(String edataShardname)
src/main/java/edu/cmu/graphchi/ChiFilenames.java:53
↓ 3 callersMethodgetStatusString
()
src/main/java/edu/cmu/graphchi/hadoop/PigGraphChiBase.java:179
↓ 3 callersMethodgetSubInterval
()
src/main/java/edu/cmu/graphchi/engine/GraphChiEngine.java:715
↓ 3 callersMethodgetValue
(int row, int col)
src/main/java/edu/cmu/graphchi/util/HugeFloatMatrix.java:53
↓ 3 callersMethodgetVertexSourceIdx
(int vertexId)
src/main/java/edu/cmu/graphchi/walks/WalkManager.java:80
↓ 3 callersMethodhasNext
()
src/main/java/edu/cmu/graphchi/vertexdata/VertexAggregator.java:99
↓ 3 callersMethodhopToHighRatings
(int[] walks, ChiVertex<Integer, Float> vertex, IntDrunkardContext drunkardContext, Random randomGenerator)
src/main/java/edu/cmu/graphchi/apps/recommendations/MovieRecommender.java:132
↓ 3 callersMethodidentity
()
src/main/java/edu/cmu/graphchi/preprocessing/VertexIdTranslate.java:94
↓ 3 callersMethodinit
(int bufferSize)
src/main/java/ucar/unidata/io/RandomAccessFile.java:283
↓ 3 callersMethodinitWeights
(int n)
test/edu/cmu/graphchi/walks/TestWeightedHopper.java:15
↓ 3 callersMethodisScheduled
(int i)
src/main/java/edu/cmu/graphchi/Scheduler.java:25
↓ 3 callersMethodisSource
Returns whether vertex id is a source of random walks. @return
src/main/java/edu/cmu/graphchi/walks/DrunkardContext.java:14
↓ 3 callersMethodloadIntervals
(String baseFilename, int nShards)
src/main/java/edu/cmu/graphchi/ChiFilenames.java:99
↓ 3 callersMethodmergeWith
(int sourceIdx, DiscreteDistribution distr)
src/main/java/edu/cmu/graphchi/walks/distributions/DrunkardCompanion.java:208
↓ 3 callersMethodnamify
(Integer value)
src/main/java/edu/cmu/graphchi/queries/demo/FriendsOfFriends.java:157
↓ 3 callersMethodpredict
Compute a prediction. Note: need to use the internal vertex-ids. @param leftVertex (often "user") @param rightVertex (often "movie") @return
src/main/java/edu/cmu/graphchi/apps/ALSMatrixFactorization.java:72
↓ 3 callersMethodreadCompressed
(File f, byte[] buf, int nbytes)
src/main/java/edu/cmu/graphchi/io/CompressedIO.java:31
↓ 3 callersMethodread_
Read directly from file, without going through the buffer. All reading goes through here or readToByteChannel; @param pos start here in the file @
src/main/java/ucar/unidata/io/RandomAccessFile.java:630
↓ 3 callersMethodrecommendFriends
Recommend friends @param vertexId queryAndCombine vertex @param fanOut maximum of queryAndCombine vertex's friends to consider. Selected randomly. @t
src/main/java/edu/cmu/graphchi/queries/demo/FriendsOfFriends.java:76
↓ 3 callersMethodreleaseAndCommit
(int firstVertex, int blockId)
src/main/java/edu/cmu/graphchi/engine/auxdata/VertexData.java:109
↓ 3 callersMethodsetDisableOutEdges
Disable loading of out-edges @param disableOutEdges
src/main/java/edu/cmu/graphchi/engine/GraphChiEngine.java:876
↓ 3 callersMethodsetMaxWindow
Configures the maximum number of vertices loaded at any time. Default is 20 million. Generally you should not needed to modify this. @param maxWindow
src/main/java/edu/cmu/graphchi/engine/GraphChiEngine.java:930
↓ 3 callersMethodsetMemoryBudgetMb
Set the memorybudget in megabytes. Default is JVM's max memory / 4. Memory budget affects the number of vertices loaded into memory at any time. @para
src/main/java/edu/cmu/graphchi/engine/GraphChiEngine.java:144
↓ 3 callersMethodsetOffset
(int newoff, int _curvid, int edgeptr)
src/main/java/edu/cmu/graphchi/shards/SlidingShard.java:218
↓ 3 callersMethodsetValue
(int row, int col, float val)
src/main/java/edu/cmu/graphchi/util/HugeFloatMatrix.java:60
↓ 3 callersMethodsortWithValues
(long[] shoveled, byte[] edgeValues, int sizeOf)
src/main/java/edu/cmu/graphchi/preprocessing/FastSharder.java:670
↓ 3 callersMethodtopListFloat
Returns a sorted list of top topN vertices having float values. @param baseFilename input-graph @param numVertices number of vertices in the graph (us
src/main/java/edu/cmu/graphchi/util/Toplist.java:31
↓ 3 callersMethodwriteLong
Writes a <code>long</code> to the file as eight bytes, high byte first. @param v a <code>long</code> to be written. @throws IOException if an I/O err
src/main/java/ucar/unidata/io/RandomAccessFile.java:1549
↓ 2 callersMethodaddInEdge
INTERNAL USE ONLY (TODO: separate better)
src/main/java/edu/cmu/graphchi/ChiVertex.java:177
↓ 2 callersMethodaddTask
Adds a vertex to schedule @param vertexId
src/main/java/edu/cmu/graphchi/engine/BitsetScheduler.java:30
↓ 2 callersMethodals_predict
(RealVector user, RealVector item)
src/main/java/edu/cmu/graphchi/toolkits/collaborative_filtering/ALS.java:56
↓ 2 callersMethodavoidCount
()
src/main/java/edu/cmu/graphchi/walks/distributions/DiscreteDistribution.java:202
↓ 2 callersMethodbeginInterval
Called when a new interval of vertices (corresponding to shards, see http://code.google.com/p/graphchi/wiki/IntroductionToGraphChi) is being processed
src/main/java/edu/cmu/graphchi/GraphChiProgram.java:56
↓ 2 callersMethodbeginIteration
Called when a new iteration starts @param ctx
src/main/java/edu/cmu/graphchi/GraphChiProgram.java:39
↓ 2 callersMethodbeginSubInterval
Called when a new sub-interval of vertices (see http://code.google.com/p/graphchi/wiki/IntroductionToGraphChi) is being processed. @param ctx @param i
src/main/java/edu/cmu/graphchi/GraphChiProgram.java:67
↓ 2 callersMethodbroadcastValue
Broadcasts a value to the neighbors by writing it to the out-edges
src/main/java/edu/cmu/graphchi/apps/kcore/KCoreDecomposer.java:152
↓ 2 callersMethodcommitNow
()
src/main/java/edu/cmu/graphchi/shards/SlidingShard.java:323
↓ 2 callersMethodcompareTo
(IdCount idCount)
src/main/java/edu/cmu/graphchi/util/IdCount.java:19
↓ 2 callersMethodcomputeALS
Compute ALS and return the ALS object which can be used to compute predictions. @param baseFilename @param nShards @param D @return @throws IOExceptio
src/main/java/edu/cmu/graphchi/apps/ALSMatrixFactorization.java:235
↓ 2 callersMethodcomputeSALSA
Compute SALSA on graph initialized in initializeGraph() method. @param nIterations
src/main/java/edu/cmu/graphchi/apps/recommendations/CircleOfTrustSalsa.java:175
↓ 2 callersMethodconfigureSourceRangeInternalIds
Start walks from vertex firstSourceId to firstSourceId + numSources @param firstSourceId @param numSources how many walks to start from each source @
src/main/java/edu/cmu/graphchi/walks/DrunkardJob.java:31
↓ 2 callersMethodconfigureWalkSources
Configure walks starting from list of vertices @param walkSources @param walksPerSource
src/main/java/edu/cmu/graphchi/walks/DrunkardJob.java:47
↓ 2 callersMethodconsume
(int firstVertexInBucket, WalkArray walkBucket, int len)
src/main/java/edu/cmu/graphchi/walks/GrabbedBucketConsumer.java:4
↓ 2 callersMethodcreateMemoryShard
For definition of "memory shards", see http://code.google.com/p/graphchi/wiki/IntroductionToGraphChi @throws IOException
src/main/java/edu/cmu/graphchi/engine/GraphChiEngine.java:197
↓ 2 callersMethodcreateSharder
Initialize the sharder-program. @param graphName @param numShards @return @throws java.io.IOException
src/main/java/edu/cmu/graphchi/toolkits/collaborative_filtering/IO.java:33
↓ 2 callersMethodcreateSharder
(String graphName, int numShards)
src/main/java/edu/cmu/graphchi/apps/randomwalks/PersonalizedPageRank.java:151
↓ 2 callersMethodcreateSharder
(String graphName, int numShards)
src/main/java/edu/cmu/graphchi/apps/recommendations/TwitterWTF.java:261
↓ 2 callersMethodcreateWalkManager
(int numVertices, int numSources)
src/main/java/edu/cmu/graphchi/walks/DrunkardFactory.java:6
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