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github.com/GUDHI/gudhi-devel
/ functions
Functions
4,084 in github.com/GUDHI/gudhi-devel
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Functions
4,084
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Types & classes
709
Method
call
Apply GaussianPerslayPhi on a ragged tensor containing a list of persistence diagrams. Parameters: diagrams (n x None x
src/python/gudhi/tensorflow/perslay.py:154
Method
call
Apply TentPerslayPhi on a ragged tensor containing a list of persistence diagrams. Parameters: diagrams (n x None x 2):
src/python/gudhi/tensorflow/perslay.py:206
Method
call
Apply FlatPerslayPhi on a ragged tensor containing a list of persistence diagrams. Parameters: diagrams (n x None x 2):
src/python/gudhi/tensorflow/perslay.py:246
Method
call
Apply Perslay on a ragged tensor containing a list of persistence diagrams. Parameters: diagrams (n x None x 2): ragged
src/python/gudhi/tensorflow/perslay.py:293
Method
change_draw_edges
src/GudhUI/view/Viewer_instructor.cpp:167
Method
change_draw_triangles
src/GudhUI/view/Viewer_instructor.cpp:171
Method
change_draw_vertices
src/GudhUI/view/Viewer_instructor.cpp:163
Method
change_light
src/GudhUI/view/Viewer_instructor.cpp:175
Method
check_if_defined_on_the_same_domain
src/Persistence_representations/include/gudhi/Persistence_landscape_on_grid.h:414
Function
children
Careful -> children_ can be NULL*/
src/Simplex_tree/include/gudhi/Simplex_tree/Simplex_tree_node_explicit_storage.h:65
Function
chrono
src/Toplex_map/benchmark/benchmark_tm.cpp:75
Method
class_key
\brief Returns the key of the representative simplex of * the set of simplices having this column as annotation vector * in the compressed annot
src/Persistent_cohomology/include/gudhi/Persistent_cohomology/Persistent_cohomology_column.h:96
Method
clean
src/Toplex_map/include/gudhi/Lazy_toplex_map.h:234
Method
clear
src/Persistence_matrix/include/gudhi/Persistence_matrix/columns/intrusive_set_column.h:548
Method
clear
src/Persistence_matrix/include/gudhi/Persistence_matrix/columns/intrusive_list_column.h:558
Method
clear
src/Persistence_matrix/include/gudhi/Persistence_matrix/columns/naive_vector_column.h:534
Method
clear
src/Persistence_matrix/include/gudhi/Persistence_matrix/columns/list_column.h:534
Method
clear
src/Persistence_matrix/include/gudhi/Persistence_matrix/columns/heap_column.h:522
Function
clear_data_home
Delete the data home cache directory and all its content. Parameters ---------- data_home : string, default is None. The pat
src/python/gudhi/datasets/remote.py:54
Method
clear_filtration
\brief Clears the filtration cache produced by initialize_filtration(). * * Useful when initialize_filtration() has already been called and we p
src/Simplex_tree/include/gudhi/Simplex_tree.h:1613
Method
closeEvent
src/GudhUI/gui/MainWindow.cpp:45
Method
close_file
src/Tangential_complex/benchmark/XML_exporter.h:133
Method
cmp_intervals
src/Collapse/example/edge_collapse_conserve_persistence.cpp:43
Method
cmp_intervals_by_dim_then_length
src/Persistent_cohomology/example/custom_persistence_sort.cpp:56
Method
cmp_intervals_by_dim_then_length
src/Persistent_cohomology/test/betti_numbers_unit_test.cpp:33
Method
cmp_intervals_by_length
src/Persistent_cohomology/include/gudhi/Persistent_cohomology.h:569
Method
cocycle
src/Persistent_cohomology/include/gudhi/Persistent_cohomology.h:724
Method
cod_d
\brief Returns the codomain dimension. */
src/Coxeter_triangulation/include/gudhi/Functions/Function_chair_in_R3.h:45
Method
cod_d
\brief Returns the codomain dimension. */
src/Coxeter_triangulation/include/gudhi/Functions/Function_moment_curve_in_Rd.h:41
Method
cod_d
\brief Returns the codomain dimension. */
src/Coxeter_triangulation/include/gudhi/Functions/Function_lemniscate_revolution_in_R3.h:46
Method
cod_d
\brief Returns the codomain dimension. Same as the codimension of the sphere. */
src/Coxeter_triangulation/include/gudhi/Functions/Function_Sm_in_Rd.h:45
Method
cod_d
\brief Returns the codomain dimension. */
src/Coxeter_triangulation/include/gudhi/Functions/Function_whitney_umbrella_in_R3.h:43
Method
cod_d
\brief Returns the codomain dimension. */
src/Coxeter_triangulation/include/gudhi/Functions/Translate.h:45
Method
cod_d
\brief Returns the codomain dimension. */
src/Coxeter_triangulation/include/gudhi/Functions/Function_iron_in_R3.h:45
Method
cod_d
\brief Returns the codomain dimension. */
src/Coxeter_triangulation/include/gudhi/Functions/Linear_transformation.h:44
Method
cod_d
\brief Returns the codomain dimension. Same as the codimension of the sphere. */
src/Coxeter_triangulation/include/gudhi/Functions/Function_affine_plane_in_Rd.h:41
Method
cod_d
\brief Returns the codomain dimension. */
src/Coxeter_triangulation/include/gudhi/Functions/Function_torus_in_R3.h:44
Method
cod_d
\brief Returns the codomain dimension. Same as the codimension of the sphere. */
src/Coxeter_triangulation/include/gudhi/Functions/Constant_function.h:39
Method
cofaces_of_cubical_persistence_pairs
This function computes the top-dimensional cofaces associated to the positive and negative simplices of a cubical complex. The output format is a vect
src/python/include/python_interfaces/Persistent_cohomology_interface.h:84
Method
collapse_edges
src/python/include/python_interfaces/Simplex_tree_interface.h:203
Method
collapse_edges
src/GudhUI/utils/Edge_collapsor.h:49
Method
collapse_edges
src/GudhUI/model/Model.h:190
Method
collapse_edges
src/GudhUI/gui/MainWindow.cpp:222
Method
collapse_vertices
src/GudhUI/utils/Vertex_collapsor.h:56
Method
collapse_vertices
src/GudhUI/model/Model.h:184
Method
collapse_vertices
src/GudhUI/gui/MainWindow.cpp:228
Method
collect_edges
* @brief Collect edges. * * Iterates over all edges of the simplicial complex and * 1) inserts them in the priority queue sorted according to
src/Contraction/include/gudhi/Skeleton_blocker_contractor.h:283
Function
column_test_base_boundary_constructors
src/Persistence_matrix/test/pm_column_tests.h:609
Function
column_test_base_boundary_z2_methods
src/Persistence_matrix/test/pm_column_tests.h:670
Function
column_test_base_boundary_z5_methods
src/Persistence_matrix/test/pm_column_tests.h:639
Function
column_test_boundary_chain_methods
src/Persistence_matrix/test/pm_column_tests.h:875
Function
column_test_boundary_methods
src/Persistence_matrix/test/pm_column_tests.h:901
Function
column_test_chain_methods
src/Persistence_matrix/test/pm_column_tests.h:1027
Function
column_test_common_constructors
src/Persistence_matrix/test/pm_column_tests.h:230
Method
commit
src/Tangential_complex/benchmark/benchmark_tc.cpp:97
Method
common_neighbors
Open neighborhood At some point it helped gcc to add __attribute__((noinline)) here, otherwise we had +50% on the running time on one example. It look
src/Collapse/include/gudhi/Flag_complex_edge_collapser.h:116
Function
compareFirstElementsOfTuples
src/Bitmap_cubical_complex/include/gudhi/Bitmap_cubical_complex_base.h:1051
Function
compare_delaunay_complex_simplices
src/Alpha_complex/test/Delaunay_complex_unit_test.h:26
Function
compare_points_sorting
landscapes * @private * This method provides a comparison of points that is used in construction of persistence landscapes. The ordering is * lexico
src/Persistence_representations/include/gudhi/common_persistence_representations.h:94
Method
complete
* @brief returns true iff the graph of the 1-skeleton of the complex is complete. */
src/Skeleton_blocker/include/gudhi/Skeleton_blocker_complex.h:1022
Method
compute_average
* A function to compute averaged persistence landscape on a grid, based on vector of persistence landscapes on grid. * This function is required by
src/Persistence_representations/include/gudhi/Persistence_landscape_on_grid.h:974
Method
compute_average
src/Persistence_representations/include/gudhi/Persistence_heat_maps.h:1022
Method
compute_average
* A function to compute averaged persistence landscape, based on vector of persistence landscapes. * This function is required by Topological_data_
src/Persistence_representations/include/gudhi/Persistence_landscape.h:682
Method
compute_boundary_lambda
src/Coxeter_triangulation/include/gudhi/Implicit_manifold_intersection_oracle.h:70
Method
compute_bounding_box_corners
src/GudhUI/view/Viewer_instructor.cpp:31
Method
compute_confidence_level_from_distance
\brief Computes the confidence level of a specific bottleneck distance threshold. * * @param[in] d Bottleneck distance. * */
src/Nerve_GIC/include/gudhi/GIC.h:1286
Method
compute_dim_0_pairs
src/Ripser/include/gudhi/ripser.h:1048
Method
compute_distance_from_confidence_level
\brief Computes the bottleneck distance threshold corresponding to a specific confidence level. * * @param[in] alpha Confidence level. * *
src/Nerve_GIC/include/gudhi/GIC.h:1273
Method
compute_distance_of_landscapes
src/Persistence_representations/include/gudhi/Persistence_landscape.h:464
Method
compute_distance_of_landscapes_on_grid
src/Persistence_representations/include/gudhi/Persistence_landscape_on_grid.h:872
Method
compute_edges
src/GudhUI/utils/Rips_builder.h:43
Method
compute_edges
src/GudhUI/utils/K_nearest_builder.h:56
Method
compute_extended_filtration
src/python/include/python_interfaces/Simplex_tree_interface.h:197
Method
compute_extended_persistence_subdiagrams
src/python/include/python_interfaces/Persistent_cohomology_interface.h:296
Method
compute_incidence_between_cells
* This procedure compute incidence numbers between cubes. For a cube \f$A\f$ of * dimension n and a cube \f$B \subset A\f$ of dimension n-1, an inci
src/Bitmap_cubical_complex/include/gudhi/Bitmap_cubical_complex_periodic_boundary_conditions_base.h:119
Method
compute_inner_product
src/Persistence_representations/include/gudhi/Persistence_landscape_on_grid.h:757
Method
compute_inner_product
src/Persistence_representations/include/gudhi/Persistence_landscape.h:530
Method
compute_lambda
src/Coxeter_triangulation/include/gudhi/Implicit_manifold_intersection_oracle.h:45
Method
compute_link_blockers
* compute the blockers of the link if is_alpha_blocker is false. * Otherwise, alpha is a blocker, and the link is computed in the complex where
src/Skeleton_blocker/include/gudhi/Skeleton_blocker_link_complex.h:203
Method
compute_link_edges
src/Skeleton_blocker/include/gudhi/Skeleton_blocker_link_complex.h:153
Method
compute_link_vertices
* @brief compute vertices of the link. * If the boolean only_superior_vertices is true, then only the vertices * are greater than vertices of a
src/Skeleton_blocker/include/gudhi/Skeleton_blocker_link_complex.h:99
Method
compute_max_norm_distance_of_landscapes
src/Persistence_representations/include/gudhi/Persistence_landscape_on_grid.h:688
Method
compute_max_norm_distance_of_landscapes
src/Persistence_representations/include/gudhi/Persistence_landscape.h:454
Method
compute_maximal_distance_non_symmetric
src/Persistence_representations/include/gudhi/Persistence_landscape.h:788
Method
compute_norm_of_landscape
* Computations of a \f$L^i\f$ norm of landscape, where i is the input parameter. **/
src/Persistence_representations/include/gudhi/Persistence_landscape_on_grid.h:668
Method
compute_pairs
src/Ripser/include/gudhi/ripser.h:1152
Method
compute_pairwise_distances
src/Nerve_GIC/include/gudhi/GIC.h:398
Method
compute_persistence
TODO: move to the constructors?
src/python/include/python_interfaces/Persistent_cohomology_interface.h:58
Method
compute_persistence
src/GudhUI/gui/MainWindow.cpp:267
Method
compute_position_in_bitmap
src/Bitmap_cubical_complex/include/gudhi/Bitmap_cubical_complex_base.h:578
Method
compute_proximity_graph
src/Rips_complex/include/gudhi/Rips_complex.h:127
Method
compute_punctual_expansion
\brief Inserts a Node with label @p v in the set of siblings sib, and percolate the * expansion on the subtree rooted at sib. Sibling sib must not
src/Simplex_tree/include/gudhi/Simplex_tree.h:1994
Function
compute_root_square
src/Bottleneck_distance/example/alpha_rips_persistence_bottleneck_distance.cpp:47
Method
compute_scalar_product
* A function to compute scalar product of persistence landscape on a grid. * The parameter of this function is a Persistence_landscape_on_grid.
src/Persistence_representations/include/gudhi/Persistence_landscape_on_grid.h:1050
Method
compute_scalar_product
* A function to compute scalar product of persistence landscapes. * The parameter of this function is a Persistence_landscape. * This function i
src/Persistence_representations/include/gudhi/Persistence_landscape.h:754
Method
compute_sparse_graph
src/Rips_complex/include/gudhi/Sparse_rips_complex.h:188
Method
compute_trie_and_nodes_to_be_seen
src/Skeleton_blocker/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_simplices_iterators.h:96
Method
connectActions
src/GudhUI/gui/MainWindow.cpp:50
Method
connectActions
src/GudhUI/gui/Menu_edge_contraction.cpp:22
Method
connectActions
src/GudhUI/gui/Menu_uniform_neighbors.cpp:19
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