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Functions4,084 in github.com/GUDHI/gudhi-devel

MethodSimplex_tree_simplex_vertex_iterator
src/Simplex_tree/include/gudhi/Simplex_tree/Simplex_tree_iterators.h:42
MethodSimplex_tree_skeleton_simplex_iterator
any end() iterator
src/Simplex_tree/include/gudhi/Simplex_tree/Simplex_tree_iterators.h:376
MethodSize_iterator
src/Coxeter_triangulation/include/gudhi/Permutahedral_representation/Size_range.h:43
MethodSize_range
src/Coxeter_triangulation/include/gudhi/Permutahedral_representation/Size_range.h:60
MethodSkeleton_blocker_complex
*@brief constructs a simplicial complex with a given number of vertices and a visitor. */
src/Skeleton_blocker/include/gudhi/Skeleton_blocker_complex.h:153
MethodSkeleton_blocker_contractor
* @brief Constructor with default policies. * * @details The default cost, placement, valid and visitor policies * are respectively : the edg
src/Contraction/include/gudhi/Skeleton_blocker_contractor.h:409
MethodSkeleton_blocker_geometric_complex
src/Skeleton_blocker/include/gudhi/Skeleton_blocker_geometric_complex.h:44
MethodSkeleton_blocker_link_complex
src/Skeleton_blocker/include/gudhi/Skeleton_blocker_link_complex.h:51
MethodSkeleton_blocker_link_superior
src/Skeleton_blocker/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h:45
MethodSkeleton_blocker_off_flag_visitor_reader
src/Skeleton_blocker/include/gudhi/Skeleton_blocker/Skeleton_blocker_off_io.h:36
MethodSkeleton_blocker_off_reader
* name_file : file to read * read_complex : complex that will receive the file content * read_only_points : specify true if only the points must
src/Skeleton_blocker/include/gudhi/Skeleton_blocker/Skeleton_blocker_off_io.h:115
MethodSkeleton_blocker_off_visitor_reader
src/Skeleton_blocker/include/gudhi/Skeleton_blocker/Skeleton_blocker_off_io.h:76
MethodSkeleton_blocker_off_writer
* name_file : file where the off will be written * save_complex : complex that be outputted in the file * for now only save triangles. */
src/Skeleton_blocker/include/gudhi/Skeleton_blocker/Skeleton_blocker_off_io.h:150
MethodSkeleton_blocker_simplex
src/Skeleton_blocker/include/gudhi/Skeleton_blocker/Skeleton_blocker_simplex.h:58
MethodSkeleton_simplex_iterator
src/Bitmap_cubical_complex/include/gudhi/Bitmap_cubical_complex.h:288
MethodSkeleton_simplex_range
src/Bitmap_cubical_complex/include/gudhi/Bitmap_cubical_complex.h:360
MethodSliced_Wasserstein
* \brief Sliced Wasserstein kernel constructor. * * @param[in] diagram persistence diagram. * @param[in] sigma bandwidth parameter. *
src/Persistence_representations/include/gudhi/Sliced_Wasserstein.h:77
MethodSparse_distance_matrix
src/Ripser/include/gudhi/ripser.h:329
MethodSparse_rips_complex
src/Rips_complex/include/gudhi/Sparse_rips_complex.h:121
MethodSphere_circumradius
\brief Constructor * @param[in] exact Option for exact filtration values computation. Not exact if `Kernel` is not <a target="_blank" * href="ht
src/Cech_complex/include/gudhi/Sphere_circumradius.h:70
MethodSphere_for_kdtree_search
`prefer_max` means that we prefer outputting more points at squared distance between r2min and r2max, while `!prefer_max` means we prefer fewer.
src/Spatial_searching/include/gudhi/Kd_tree_search.h:131
MethodStraighten
src/Coxeter_triangulation/include/gudhi/IO/output_debug_traces_to_html.h:35
MethodStreaming_XML_exporter
src/Tangential_complex/benchmark/XML_exporter.h:110
MethodStrong_witness_complex
src/Witness_complex/include/gudhi/Strong_witness_complex.h:62
MethodStrong_witness_complex_interface
src/python/gudhi/_strong_witness_complex.cc:38
MethodT_no_index
src/Persistent_cohomology/include/gudhi/Persistence_on_rectangle.h:64
MethodT_with_index
src/Persistent_cohomology/include/gudhi/Persistence_on_rectangle.h:54
FunctionTangential_complex
src/Tangential_complex/include/gudhi/Tangential_complex.h:241
MethodTangential_complex_interface
src/python/gudhi/_tangential_complex.cc:44
MethodTop_dimensional_cells_iterator
src/Bitmap_cubical_complex/include/gudhi/Bitmap_cubical_complex_base.h:323
MethodTop_dimensional_cells_range
src/Bitmap_cubical_complex/include/gudhi/Bitmap_cubical_complex_base.h:412
MethodTr_and_VH
src/Tangential_complex/include/gudhi/Tangential_complex.h:164
MethodTranslate
* \brief Constructor of the translated function. * * @param[in] function The function to be translated. * @param[in] off The offset vector. T
src/Coxeter_triangulation/include/gudhi/Functions/Translate.h:61
MethodTriangle_around_vertex_iterator
src/Skeleton_blocker/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h:47
MethodTriangle_iterator
* @remark assume that the complex is non-empty */
src/Skeleton_blocker/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h:124
MethodTrie
src/Skeleton_blocker/include/gudhi/Skeleton_blocker/internal/Trie.h:35
MethodTries
src/Skeleton_blocker/include/gudhi/Skeleton_blocker/internal/Trie.h:190
MethodUndirected_edge_id
src/Contraction/include/gudhi/Skeleton_blocker_contractor.h:163
MethodUnion_find
src/Ripser/include/gudhi/ripser.h:116
MethodUnordered_set_column
src/Persistence_matrix/include/gudhi/Persistence_matrix/columns/unordered_set_column.h:256
MethodVector_column
src/Persistence_matrix/include/gudhi/Persistence_matrix/columns/vector_column.h:288
MethodVector_distances_in_diagram
* The default constructor. **/
src/Persistence_representations/include/gudhi/Persistence_vectors.h:64
MethodVector_filtration_value
src/Simplex_tree/test/test_vector_filtration_simplex_tree.h:31
MethodVertex_collapsor
* @brief Modify complex to be the expansion of the k-nearest neighbor * symmetric graph. */
src/GudhUI/utils/Vertex_collapsor.h:36
MethodVertex_data
src/Tangential_complex/include/gudhi/Tangential_complex.h:88
MethodVertex_handle
src/Skeleton_blocker/include/gudhi/Skeleton_blocker/Skeleton_blocker_simple_traits.h:67
MethodVertex_iterator
src/Skeleton_blocker/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_vertices_iterators.h:42
MethodVertex_iterator
src/Coxeter_triangulation/include/gudhi/Permutahedral_representation/Permutahedral_representation_iterators.h:70
MethodVertices_iterator
src/Bitmap_cubical_complex/include/gudhi/Bitmap_cubical_complex_base.h:437
MethodVertices_iterator
src/Bitmap_cubical_complex/include/gudhi/Bitmap_cubical_complex_periodic_boundary_conditions_base.h:163
MethodVertices_range
src/Bitmap_cubical_complex/include/gudhi/Bitmap_cubical_complex_base.h:526
MethodVertices_range
src/Bitmap_cubical_complex/include/gudhi/Bitmap_cubical_complex_periodic_boundary_conditions_base.h:252
MethodView_parameter
src/GudhUI/view/View_parameter.h:86
MethodViewer
src/GudhUI/view/Viewer.cpp:14
MethodViewer_instructor
src/GudhUI/view/Viewer_instructor.cpp:17
MethodWitness_complex
src/Witness_complex/include/gudhi/Witness_complex.h:60
MethodWitness_complex_interface
src/python/gudhi/_witness_complex.cc:38
MethodXML_perf_data
src/Tangential_complex/benchmark/benchmark_tc.cpp:81
MethodZ2_field_element
* @brief Default constructor. */
src/Persistence_matrix/include/gudhi/Fields/Z2_field.h:41
MethodZigzag_persistence
* @brief Constructor of the Zigzag_persistence class. * @details After construction of the class, the zigzag filtration should be given in a stream
src/Zigzag_persistence/include/gudhi/zigzag_persistence.h:264
MethodZp_field_element
* @brief Default constructor. Sets the element to 0. */
src/Persistence_matrix/include/gudhi/Fields/Zp_field.h:51
MethodZp_field_operators
* @brief Default constructor. If a non-zero characteristic is given, initializes the field with it. * The characteristic can later be changed again
src/Persistence_matrix/include/gudhi/Fields/Zp_field_operators.h:59
Method__call__
Transform method for single time-series data. Parameters ---------- ts : Iterable[float] or Iterable[Iterable[float]]
src/python/gudhi/point_cloud/timedelay.py:53
Method__call__
Apply BirthPersistenceTransform on a single persistence diagram and outputs the result. Parameters: diag (n x 2 numpy ar
src/python/gudhi/representations/preprocessing.py:120
Method__call__
Apply DiagramScaler on a single persistence diagram and outputs the result. If :func:`fit` hasn't been run, this uses `fit_transform`
src/python/gudhi/representations/preprocessing.py:188
Method__call__
Apply Padding on a single persistence diagram and outputs the result. If :func:`fit` hasn't been run, this uses `fit_transform` on a
src/python/gudhi/representations/preprocessing.py:252
Method__call__
Apply ProminentPoints on a single persistence diagram and outputs the result. Parameters: diag (n x 2 numpy array): inpu
src/python/gudhi/representations/preprocessing.py:359
Method__call__
Apply DiagramSelector on a single persistence diagram and outputs the result. Parameters: diag (n x 2 numpy array): inpu
src/python/gudhi/representations/preprocessing.py:423
Method__call__
Apply SlicedWassersteinKernel on a single pair of persistence diagrams and outputs the result. Parameters: diag1 (n x 2
src/python/gudhi/representations/kernel_methods.py:203
Method__call__
Apply PersistenceWeightedGaussianKernel on a single pair of persistence diagrams and outputs the result. Parameters: dia
src/python/gudhi/representations/kernel_methods.py:270
Method__call__
Apply PersistenceScaleSpaceKernel on a single pair of persistence diagrams and outputs the result. Parameters: diag1 (n
src/python/gudhi/representations/kernel_methods.py:337
Method__call__
Apply PersistenceFisherKernel on a single pair of persistence diagrams and outputs the result. Parameters: diag1 (n x 2
src/python/gudhi/representations/kernel_methods.py:403
Method__call__
Apply PersistenceImage on a single persistence diagram and outputs the result. If :func:`fit` hasn't been run, this uses `fit_transfo
src/python/gudhi/representations/vector_methods.py:140
Method__call__
Apply Landscape on a single persistence diagram and outputs the result. If :func:`fit` hasn't been run, this uses `fit_transform` on
src/python/gudhi/representations/vector_methods.py:291
Method__call__
Apply Silhouette on a single persistence diagram and outputs the result. If :func:`fit` hasn't been run, this uses `fit_transform` on
src/python/gudhi/representations/vector_methods.py:372
Method__call__
Shorthand for transform on a single persistence diagram. If :func:`fit` hasn't been run, this uses `fit_transform` on a clone of the
src/python/gudhi/representations/vector_methods.py:557
Method__call__
Apply Entropy on a single persistence diagram and outputs the result. If :func:`fit` hasn't been run, this uses `fit_transform` on a
src/python/gudhi/representations/vector_methods.py:659
Method__call__
Apply TopologicalVector on a single persistence diagram and outputs the result. Parameters: diag (n x 2 numpy array): in
src/python/gudhi/representations/vector_methods.py:737
Method__call__
Apply ComplexPolynomial on a single persistence diagram and outputs the result. Parameters: diag (n x 2 numpy array): in
src/python/gudhi/representations/vector_methods.py:817
Method__call__
Apply measure vectorisation on a single measure. Only available after `fit` has been called. Parameters: measure (n x d
src/python/gudhi/representations/vector_methods.py:1004
Method__call__
Apply PersistenceLengths on a single persistence diagram and outputs the result. Parameters: diag (n x 2 numpy array): i
src/python/gudhi/representations/vector_methods.py:1101
Method__call__
Apply SlicedWassersteinDistance on a single pair of persistence diagrams and outputs the result. Parameters: diag1 (n x
src/python/gudhi/representations/metrics.py:320
Method__call__
Apply BottleneckDistance on a single pair of persistence diagrams and outputs the result. Parameters: diag1 (n x 2 numpy
src/python/gudhi/representations/metrics.py:392
Method__call__
Apply PersistenceFisherDistance on a single pair of persistence diagrams and outputs the result. Parameters: diag1 (n x
src/python/gudhi/representations/metrics.py:462
Method__call__
Apply WassersteinDistance on a single pair of persistence diagrams and outputs the result. Parameters: diag1 (n x 2 nump
src/python/gudhi/representations/metrics.py:545
Method__deepcopy__
(self)
src/python/gudhi/simplex_tree.py:76
Method__init__
WitnessComplex constructor. :param nearest_landmark_table: A list of lists of nearest landmarks and their distances. `nearest_lan
src/python/gudhi/witness_complex.py:25
Method__init__
Args: points (Sequence[Sequence[float]]): A list of points in d-Dimension. precision (str): Complex precision can be
src/python/gudhi/delaunay_complex.py:157
Method__init__
(self, verbose=2)
src/python/gudhi/_kepler_mapper.py:27
Method__init__
StrongWitnessComplex constructor. :param nearest_landmark_table: A list of lists of nearest landmarks and their distances. `neare
src/python/gudhi/strong_witness_complex.py:25
Method__init__
RipsComplex constructor. :param points: A list of points in d-Dimension. :type points: Sequence[Sequence[float]] or any array like ob
src/python/gudhi/rips_complex.py:30
Method__init__
CubicalComplex constructor from the filtration values of either the top-dimensional cells, or the vertices. Note that in case `top_di
src/python/gudhi/cubical_complex.py:29
Method__init__
SimplexTree constructor. :param other: If `other` is `None` (default value), an empty `SimplexTree` is created. If `other` is a `
src/python/gudhi/simplex_tree.py:37
Method__init__
Args: distance_matrix (Sequence[Sequence[float]]): distance matrix (full square or lower triangular). weights (Sequen
src/python/gudhi/weighted_rips_complex.py:26
Method__init__
WitnessComplex constructor. :param landmarks: A list of landmarks (in the point cloud). :type landmarks: list of list of double
src/python/gudhi/euclidean_strong_witness_complex.py:25
Method__init__
CoverComplex constructor.
src/python/gudhi/nerve_gic.py:33
Method__init__
TangentialComplex constructor. :param intrinsic_dim: Intrinsic dimension of the manifold. :type intrinsic_dim: integer :para
src/python/gudhi/tangential_complex.py:28
Method__init__
Constructor for the CoverComplexPy class. Parameters ----------
src/python/gudhi/cover_complex.py:98
Method__init__
Constructor for the MapperComplex class. Parameters ---------- input_type : string type of input data. E
src/python/gudhi/cover_complex.py:334
Method__init__
Constructor for the GraphInducedComplex class. Parameters: input_type (string): type of input data. Either "point cloud"
src/python/gudhi/cover_complex.py:687
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