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Functions4,084 in github.com/GUDHI/gudhi-devel

⨍ Functions 4,084◇ Types & classes 709

↓ 1 callersMethodto_string

src/Skeleton_blocker/include/gudhi/Skeleton_blocker/Skeleton_blocker_simple_traits.h:121

↓ 1 callersFunctiontomato

src/python/gudhi/clustering/_tomato.cc:59

↓ 1 callersMethodtransform

Transform method for multiple time-series data. Parameters ---------- ts : Iterable[Iterable[float]] or Iterable[Iterable[Ite

src/python/gudhi/point_cloud/timedelay.py:84

↓ 1 callersMethodtransform

Apply the BirthPersistenceTransform function on the persistence diagrams. Parameters: X (list of n x 2 numpy array): inp

src/python/gudhi/representations/preprocessing.py:101

↓ 1 callersMethodtransform

If location == "upper", first select the top **num_pts** points that are the farthest away from the diagonal, then select and return from the

src/python/gudhi/representations/preprocessing.py:296

↓ 1 callersMethodtransform

Extract and return the finite or essential points of each persistence diagram individually. Parameters: X (list of n x 2

src/python/gudhi/representations/preprocessing.py:398

↓ 1 callersMethodtransform

Compute Betti curves. Parameters: X (list of 2d arrays): Persistence diagrams. Returns: `len(X).len

src/python/gudhi/representations/vector_methods.py:463

↓ 1 callersMethodtransform

Compute the topological vector for each persistence diagram individually and concatenate the results. Parameters: X (lis

src/python/gudhi/representations/vector_methods.py:697

↓ 1 callersMethodtransform

Compute the complex vector of coefficients for each persistence diagram individually and concatenate the results. Parameters:

src/python/gudhi/representations/vector_methods.py:775

↓ 1 callersMethodtransform

Compute the persistence lengths for each persistence diagram individually. Parameters: X (list of n x 2 numpy arrays): i

src/python/gudhi/representations/vector_methods.py:1077

↓ 1 callersFunctiontranslate

src/Coxeter_triangulation/include/gudhi/Functions/Translate.h:81

↓ 1 callersFunctionunify_lifetimes

src/Simplex_tree/include/gudhi/Simplex_tree/filtration_value_utils.h:62

↓ 1 callersMethodunion_vertices

* Add vertices of a to the simplex. */

src/Skeleton_blocker/include/gudhi/Skeleton_blocker/Skeleton_blocker_simplex.h:155

↓ 1 callersMethodunlink_hooks

src/Simplex_tree/include/gudhi/Simplex_tree/hooks_simplex_base.h:50

↓ 1 callersMethodupdate_GL

src/GudhUI/view/Viewer.cpp:33

↓ 1 callersMethodupdate_dynamic_extent

src/common/include/gudhi/simple_mdspan.h:132

↓ 1 callersMethodupdate_representative_cycle

src/Persistence_matrix/include/gudhi/Matrix.h:2225

↓ 1 callersFunctionupdate_star

src/Tangential_complex/include/gudhi/Tangential_complex.h:1181

↓ 1 callersFunctionusage

src/Nerve_GIC/example/FuncGIC.cpp:16

↓ 1 callersFunctionusage

src/Nerve_GIC/example/CoordGIC.cpp:16

↓ 1 callersFunctionusage

src/Nerve_GIC/utilities/VoronoiGIC.cpp:16

↓ 1 callersFunctionusage

src/Nerve_GIC/utilities/Nerve.cpp:16

↓ 1 callersFunctionusage

src/Alpha_complex/example/Fast_alpha_complex_from_off.cpp:10

↓ 1 callersFunctionusage

src/Alpha_complex/example/Alpha_complex_from_off.cpp:8

↓ 1 callersFunctionusage

src/Rips_complex/example/example_rips_complex_from_off_file.cpp:11

↓ 1 callersFunctionusage

src/Rips_complex/example/example_rips_complex_from_csv_distance_matrix_file.cpp:11

↓ 1 callersMethodvertices_range

Returns a range over all vertices. */

src/Bitmap_cubical_complex/include/gudhi/Bitmap_cubical_complex_base.h:537

↓ 1 callersMethodvine_swap_with_z_eq_1_case

src/Persistence_matrix/include/gudhi/Matrix.h:2170

↓ 1 callersMethodvisualize

(self, complex, color_function="", path_html="mapper_visualization_output.html", title="My Data", g

src/python/gudhi/_kepler_mapper.py:216

↓ 1 callersMethodvlayers_number

src/Bottleneck_distance/include/gudhi/Neighbors_finder.h:174

↓ 1 callersFunctionwrite_cc

src/Coxeter_triangulation/include/gudhi/IO/output_debug_traces_to_html.h:305

↓ 1 callersFunctionwrite_data

src/Witness_complex/example/example_witness_complex_sphere.cpp:24

↓ 1 callersFunctionwrite_head

src/Coxeter_triangulation/include/gudhi/IO/output_debug_traces_to_html.h:156

↓ 1 callersFunctionwrite_mt

src/Coxeter_triangulation/include/gudhi/IO/output_debug_traces_to_html.h:275

↓ 1 callersFunctionwrite_nav

src/Coxeter_triangulation/include/gudhi/IO/output_debug_traces_to_html.h:252

↓ 1 callersFunctionwrite_visu

src/Coxeter_triangulation/include/gudhi/IO/output_debug_traces_to_html.h:512

MethodActive_witness

src/Witness_complex/include/gudhi/Active_witness/Active_witness.h:39

MethodActive_witness_iterator

src/Witness_complex/include/gudhi/Active_witness/Active_witness_iterator.h:47

MethodAlpha_complex

\brief Alpha_complex constructor from an OFF file name. * * Uses the Points_off_reader to construct the Delaunay triangulation required to initi

src/Alpha_complex/include/gudhi/Alpha_complex.h:173

MethodAlpha_complex_3d

src/Alpha_complex/include/gudhi/Alpha_complex_3d.h:273

MethodAtomic_wrapper

src/Tangential_complex/include/gudhi/Tangential_complex/utilities.h:41

FunctionBOOST_AUTO_TEST_CASE

src/Persistence_matrix/test/test_persistence_matrix_field_operators.cpp:366

FunctionBOOST_AUTO_TEST_CASE

src/Persistence_matrix/test/test_persistence_matrix_field.cpp:306

FunctionBOOST_AUTO_TEST_CASE

src/Spatial_searching/test/test_Kd_tree_search.cpp:22

FunctionBOOST_AUTO_TEST_CASE

src/Nerve_GIC/test/test_GIC.cpp:24

FunctionBOOST_AUTO_TEST_CASE

src/Alpha_complex/test/Delaunay_complex_Epeck_dynamic_unit_test.cpp:19

FunctionBOOST_AUTO_TEST_CASE

src/Alpha_complex/test/Alpha_complex_3d_unit_test.cpp:52

FunctionBOOST_AUTO_TEST_CASE

src/Alpha_complex/test/Alpha_complex_dim3_Epeck_static_unit_test.cpp:22

FunctionBOOST_AUTO_TEST_CASE

src/Alpha_complex/test/Weighted_alpha_complex_unit_test.cpp:31

FunctionBOOST_AUTO_TEST_CASE

src/Alpha_complex/test/Incremental_delaunay_test.cpp:63

FunctionBOOST_AUTO_TEST_CASE

src/Alpha_complex/test/Zero_weighted_alpha_complex_dynamic_unit_test.cpp:17

FunctionBOOST_AUTO_TEST_CASE

src/Alpha_complex/test/Alpha_complex_dim3_Epeck_dynamic_unit_test.cpp:22

FunctionBOOST_AUTO_TEST_CASE

src/Alpha_complex/test/Alpha_complex_dim3_Epick_static_unit_test.cpp:22

FunctionBOOST_AUTO_TEST_CASE

src/Alpha_complex/test/Delaunay_complex_Epick_static_unit_test.cpp:19

FunctionBOOST_AUTO_TEST_CASE

src/Alpha_complex/test/Alpha_kernel_d_Epeck_dynamic_unit_test.cpp:19

FunctionBOOST_AUTO_TEST_CASE

src/Alpha_complex/test/Alpha_complex_unit_test.cpp:41

FunctionBOOST_AUTO_TEST_CASE

src/Alpha_complex/test/Zero_weighted_alpha_complex_static_unit_test.cpp:17

FunctionBOOST_AUTO_TEST_CASE

src/Alpha_complex/test/Alpha_kernel_d_Epick_dynamic_unit_test.cpp:19

FunctionBOOST_AUTO_TEST_CASE

src/Alpha_complex/test/Alpha_kernel_d_Epeck_static_unit_test.cpp:19

FunctionBOOST_AUTO_TEST_CASE

src/Alpha_complex/test/Weighted_periodic_alpha_complex_3d_unit_test.cpp:113

FunctionBOOST_AUTO_TEST_CASE

src/Alpha_complex/test/Periodic_alpha_complex_3d_unit_test.cpp:69

FunctionBOOST_AUTO_TEST_CASE

src/Alpha_complex/test/Delaunay_complex_Epick_dynamic_unit_test.cpp:19

FunctionBOOST_AUTO_TEST_CASE

src/Alpha_complex/test/Alpha_kernel_d_Epick_static_unit_test.cpp:19

FunctionBOOST_AUTO_TEST_CASE

src/Alpha_complex/test/Delaunay_complex_Epeck_static_unit_test.cpp:19

FunctionBOOST_AUTO_TEST_CASE

src/Alpha_complex/test/Alpha_complex_dim3_Epick_dynamic_unit_test.cpp:22

FunctionBOOST_AUTO_TEST_CASE

src/Zigzag_persistence/test/test_filtered_zigzag_persistence.cpp:35

FunctionBOOST_AUTO_TEST_CASE

src/Zigzag_persistence/test/test_zigzag_persistence.cpp:35

FunctionBOOST_AUTO_TEST_CASE

src/Collapse/test/collapse_unit_test.cpp:78

FunctionBOOST_AUTO_TEST_CASE

src/Skeleton_blocker/test/test_skeleton_blocker_complex.cpp:71

FunctionBOOST_AUTO_TEST_CASE

src/Skeleton_blocker/test/test_skeleton_blocker_simplifiable.cpp:41

FunctionBOOST_AUTO_TEST_CASE

src/Skeleton_blocker/test/test_skeleton_blocker_geometric_complex.cpp:34

FunctionBOOST_AUTO_TEST_CASE

this test is separated as it requires CGAL

src/Coxeter_triangulation/test/random_orthogonal_matrix_function_test.cpp:24

FunctionBOOST_AUTO_TEST_CASE

src/Coxeter_triangulation/test/function_test.cpp:53

FunctionBOOST_AUTO_TEST_CASE

src/Coxeter_triangulation/test/manifold_tracing_test.cpp:25

FunctionBOOST_AUTO_TEST_CASE

src/Coxeter_triangulation/test/oracle_test.cpp:30

FunctionBOOST_AUTO_TEST_CASE

src/Coxeter_triangulation/test/perm_rep_test.cpp:17

FunctionBOOST_AUTO_TEST_CASE

src/Coxeter_triangulation/test/freud_triang_test.cpp:19

FunctionBOOST_AUTO_TEST_CASE

src/Coxeter_triangulation/test/cell_complex_test.cpp:29

FunctionBOOST_AUTO_TEST_CASE

src/Simplex_tree/test/simplex_tree_edge_expansion_unit_test.cpp:115

FunctionBOOST_AUTO_TEST_CASE

src/Simplex_tree/test/simplex_tree_remove_unit_test.cpp:34

FunctionBOOST_AUTO_TEST_CASE

src/Simplex_tree/test/simplex_tree_constness_unit_test.cpp:138

FunctionBOOST_AUTO_TEST_CASE

src/Simplex_tree/test/simplex_tree_ctor_and_move_unit_test.cpp:326

FunctionBOOST_AUTO_TEST_CASE

src/Simplex_tree/test/simplex_tree_data_unit_test.cpp:28

FunctionBOOST_AUTO_TEST_CASE

src/Simplex_tree/test/simplex_tree_unit_test.cpp:1080

FunctionBOOST_AUTO_TEST_CASE

src/Simplex_tree/test/simplex_tree_serialization_unit_test.cpp:397

FunctionBOOST_AUTO_TEST_CASE

src/Simplex_tree/test/simplex_tree_iostream_operator_unit_test.cpp:111

FunctionBOOST_AUTO_TEST_CASE

src/Bottleneck_distance/test/bottleneck_unit_test.cpp:30

FunctionBOOST_AUTO_TEST_CASE

src/Persistent_cohomology/test/betti_numbers_unit_test.cpp:47

FunctionBOOST_AUTO_TEST_CASE

src/Persistent_cohomology/test/persistent_cohomology_unit_test_multi_field.cpp:97

FunctionBOOST_AUTO_TEST_CASE

src/Persistent_cohomology/test/persistent_cohomology_unit_test.cpp:158

FunctionBOOST_AUTO_TEST_CASE

src/Bitmap_cubical_complex/test/Bitmap_test.cpp:33

FunctionBOOST_AUTO_TEST_CASE

src/common/test/test_points_off_reader.cpp:23

FunctionBOOST_AUTO_TEST_CASE

Test files with only 2 parameters (persistence birth and death) per line in file

src/common/test/test_persistence_intervals_reader.cpp:27

FunctionBOOST_AUTO_TEST_CASE

src/common/test/test_simple_mdspan.cpp:24

FunctionBOOST_AUTO_TEST_CASE

src/common/test/test_distance_matrix_reader.cpp:23

FunctionBOOST_AUTO_TEST_CASE

src/common/test/test_random.cpp:70

FunctionBOOST_AUTO_TEST_CASE

src/Tangential_complex/test/test_tangential_complex.cpp:27

FunctionBOOST_AUTO_TEST_CASE

src/Cech_complex/test/test_cech_complex.cpp:41

FunctionBOOST_AUTO_TEST_CASE

src/Persistence_representations/test/persistence_intervals_with_distances_test.cpp:25

FunctionBOOST_AUTO_TEST_CASE

src/Persistence_representations/test/read_persistence_from_file_test.cpp:22

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