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Functions5,261 in github.com/GMUEClab/ecj

↓ 12 callersMethodminChildProduction
Returns the minimum among the typicalIndsProduced() for any children -- a function that's useful internally, not very useful for you to call
ecj/src/main/java/ec/BreedingPipeline.java:107
↓ 12 callersMethodmutationProbability
(int gene)
ecj/src/main/java/ec/vector/VectorSpecies.java:242
↓ 12 callersMethodnextBoolean
()
ecj/src/main/java/ec/util/MersenneTwisterFast.java:486
↓ 12 callersMethodorganizeDistribution
Same as organizeDistribution(probabilities, <b>false</b>);
ecj/src/main/java/ec/util/RandomChoice.java:58
↓ 12 callersMethodreadObject
Not only deserialises the object, also performs adjustments on the timestamps to bring them in alignment with the local time. Reads the current time o
contrib/drm/drm/core/Collective.java:185
↓ 12 callersMethodtoString
()
ecj/src/main/java/ec/util/DataPipe.java:149
↓ 12 callersMethodwriteObject
( ObjectOutputStream out )
contrib/drm/drm/core/Collective.java:150
↓ 11 callersMethodRRSEfitness
Calculates the fitness for the RRSE (Root Relative Squared Error) type fitness. Gets the raw fitness and then normalizes between 0 and max value as (m
contrib/gep/ec/gep/GEPFitnessFunction.java:915
↓ 11 callersMethodbase
Returns the default base.
ecj/src/main/java/ec/breed/BreedDefaults.java:29
↓ 11 callersMethodbetterThan
Should return true if this fitness is clearly better than _fitness; You may assume that _fitness is of the same class as yourself.
ecj/src/main/java/ec/Fitness.java:167
↓ 11 callersMethodbetterThan
(final Fitness _fitness)
ecj/src/main/java/ec/simple/SimpleFitness.java:95
↓ 11 callersMethodbetterThan
(Individual first, Individual second, int subpopulation, EvolutionState state, int thread)
ecj/src/main/java/ec/parsimony/ProportionalTournamentSelection.java:83
↓ 11 callersMethodcheckPreamble
Finds the next nonblank line, then trims the line and checks the preamble. Returns a DecodeReturn on the line if successful, else posts a fatal error
ecj/src/main/java/ec/util/Code.java:616
↓ 11 callersMethodconstraints
(final GPInitializer initializer)
contrib/xholon/ec/gp/GPNode.java:147
↓ 11 callersMethoddebug
(String s)
ecj/src/main/java/ec/eval/SlaveConnection.java:135
↓ 11 callersMethoddetermineActiveFunctionNodes
Determines the active function nodes on an CGP individual.
contrib/cgp/ec/cgp/representation/AdvancedIntegerVectorSpecies.java:81
↓ 11 callersMethodfirst
Return the first individual in this subspecies
ecj/src/main/java/ec/neat/NEATSubspecies.java:100
↓ 11 callersMethodgetAllComponents
@return all components that exist in the problem definition.
ecj/src/main/java/ec/co/ConstructiveProblemForm.java:75
↓ 11 callersMethodgetMatchingIndex
Returns the index of the regular expression which matched the most recent token.
ecj/src/main/java/ec/util/Lexer.java:65
↓ 11 callersMethodgetRecipient
The address of the recepient.
contrib/drm/drm/agentbase/Message.java:109
↓ 11 callersMethodqsort
Non-Recursive QuickSort
ecj/src/main/java/ec/util/QuickSort.java:53
↓ 11 callersMethodsetSize
Resize the SimulationCanvas.
contrib/teambots/ec/teambots/ECSimulationCanvas.java:1188
↓ 11 callersMethodsetup
(final EvolutionState state, final Parameter base)
ecj/src/main/java/ec/multiobjective/nsga2/NSGA2Breeder.java:43
↓ 11 callersMethodtoStringForError
Returns a description of the node that can make it easy to identify in error messages (by default, at least its name and the tree it's found i
contrib/xholon/ec/gp/GPNode.java:787
↓ 10 callersMethod_getParam
(String parameter)
ecj/src/main/java/ec/util/ParameterDatabase.java:2511
↓ 10 callersMethodb2f
Convert the given boolean to float. "True" is 1.0; "false" is -1.0.
contrib/cgp/ec/cgp/functions/FunctionsBreastCancerY.java:117
↓ 10 callersMethodbetterThan
Returns true if first is a better (fitter, whatever) individual than second .
ecj/src/main/java/ec/select/TournamentSelection.java:133
↓ 10 callersMethodconstraints
(RuleInitializer initializer)
ecj/src/main/java/ec/rule/RuleSet.java:88
↓ 10 callersMethodcreateTestIndividual
(final int[] genome, final double fitness)
ecj/src/test/java/ec/simple/SimpleShortStatisticsTest.java:126
↓ 10 callersMethodcreateTestIndividual
(final int[] genome, final double fitness)
ecj/src/test/java/ec/eda/pbil/PBILSpeciesTest.java:258
↓ 10 callersMethoddescribe
"Reevaluates" an individual, for the purpose of printing out interesting facts about the individual in the context of the Prob
ecj/src/main/java/ec/simple/SimpleProblemForm.java:45
↓ 10 callersMethodduplicateRetries
(int gene)
ecj/src/main/java/ec/vector/VectorSpecies.java:250
↓ 10 callersMethodequals
(final Object o)
ecj/src/main/java/ec/util/IIntPoint.java:24
↓ 10 callersMethodequals
This is needed when we use a GrammarNode as a "key" in hash-map, see GrammarParser.java for details.
ecj/src/main/java/ec/gp/ge/GrammarNode.java:41
↓ 10 callersMethodevaluate
Evaluates the individuals found in ind together. If updateFitness[i] is true, then you should use this evaluation to update the fitness of th
ecj/src/main/java/ec/coevolve/GroupedProblemForm.java:106
↓ 10 callersMethodf2b
Interpret the given float as a boolean value. Any value > 0 is interpreted as "true".
contrib/cgp/ec/cgp/functions/FunctionsBreastCancerY.java:112
↓ 10 callersMethodfCauchy
(double fTrue, double alpha, double p, MersenneTwisterFast random)
ecj/src/main/java/ec/app/bbob/BBOBenchmarks.java:1964
↓ 10 callersMethodfGauss
(double fTrue, double beta, MersenneTwisterFast random)
ecj/src/main/java/ec/app/bbob/BBOBenchmarks.java:1946
↓ 10 callersMethodfUniform
(double fTrue, double alpha, double beta, MersenneTwisterFast random)
ecj/src/main/java/ec/app/bbob/BBOBenchmarks.java:1955
↓ 10 callersMethodgetDoublesUnconstrained
(Parameter parameter, int expectedLength)
ecj/src/main/java/ec/util/ParameterDatabase.java:1497
↓ 10 callersMethodgetFirstChild
()
contrib/xholon/ec/gp/GPTree.java:402
↓ 10 callersMethodinssort
Insertion Sort
ecj/src/main/java/ec/util/QuickSort.java:61
↓ 10 callersMethodlightClone
()
ecj/src/main/java/ec/gp/GPNode.java:626
↓ 10 callersMethodnext
Returns an integer with <i>bits</i> bits filled with a random number.
ecj/src/main/java/ec/util/MersenneTwister.java:382
↓ 10 callersMethodnextBoolean
()
ecj/src/test/java/ec/test/TestPRNG.java:104
↓ 10 callersMethodnumNodes
()
ecj/src/main/java/ec/app/tsp/TSPProblem.java:93
↓ 10 callersMethodqsort_h
(byte[] array, int oi, int oj)
ecj/src/main/java/ec/util/QuickSort.java:71
↓ 10 callersMethodresetNode
Starts a node in a new life immediately after it has been cloned. The default version of this function does nothing. The purpose of t
ecj/src/main/java/ec/gp/GPNode.java:620
↓ 10 callersMethodsetProbability
Sets obj's probability
ecj/src/main/java/ec/util/RandomChoiceChooser.java:29
↓ 10 callersMethodwait
Convenience method
contrib/drm/ec/drm/app/tutorial8/IslandAgent.java:57
↓ 9 callersMethodbase
Returns the default base, which is built off of the GPDefaults base.
ecj/src/main/java/ec/gp/breed/GPBreedDefaults.java:35
↓ 9 callersMethodclose
Destroys all the agents, stops all the threads, and goes offline. The behaviour of the base after calling close is undefined. It must be called before
contrib/drm/drm/agentbase/Base.java:1099
↓ 9 callersMethodconstraints
( final GPInitializer initializer )
contrib/xholon/ec/gp/GPTree.java:212
↓ 9 callersMethodcontainsNulls
@return true iff c contains any null values.
ecj/src/main/java/ec/util/Misc.java:24
↓ 9 callersMethodcreateIndForPoint
(final double[] fitnesses, final boolean[] maximize)
ecj/src/test/java/ec/multiobjective/MultiObjectiveFitnessTest.java:99
↓ 9 callersMethoddepth
Returns the depth of the tree, which is a value >= 1. O(n).
ecj/src/main/java/ec/gp/GPNode.java:347
↓ 9 callersMethodgetMarginalDistribution
(final int gene)
ecj/src/main/java/ec/eda/pbil/PBILSpecies.java:99
↓ 9 callersMethodparseLong
(String string)
ecj/src/main/java/ec/util/ParameterDatabase.java:819
↓ 9 callersMethodpickNode
Picks a node at random from tree and returns it. The tree is located in ind, which is located in s.population[subpopulation]. This m
ecj/src/main/java/ec/gp/GPNodeSelector.java:42
↓ 9 callersMethodresizeSeedTable
@throws NumberFormatException
ecj/src/main/java/ec/display/ControlPanel.java:402
↓ 9 callersMethodrun
()
ecj/src/main/java/ec/eval/Slave.java:641
↓ 9 callersMethodsetup
(final EvolutionState state, final Parameter base)
ecj/src/main/java/ec/eda/pbil/PBILSpecies.java:106
↓ 9 callersMethodsynchronizedIncrementEvaluations
(int val)
ecj/src/main/java/ec/EvolutionState.java:442
↓ 8 callersMethodaddLog
Creates a new log and updates the logtable.
contrib/drm/ec/drm/DRMStatistics.java:112
↓ 8 callersMethodbase
Returns the default base.
ecj/src/main/java/ec/rule/RuleDefaults.java:33
↓ 8 callersMethodequals
(Object ind)
ecj/src/main/java/ec/gp/GPIndividual.java:103
↓ 8 callersMethodfinishProducing
(final EvolutionState s, final int subpopulation, final int thread)
ecj/src/main/java/ec/select/BestSelection.java:220
↓ 8 callersMethodfitnessToStringForHumans
Print to a string the fitness in a fashion readable by humans, and not intended to be parsed in again. The default form simply call
ecj/src/main/java/ec/Fitness.java:257
↓ 8 callersMethodgetIndex
Functionality: retrieve the index for a specific threanum. Returns -1 if any error is encountered.
ecj/src/main/java/ec/spatial/Space.java:63
↓ 8 callersMethodgetLocalHost
Returns an <code>InetAddress</code> object encapsulating what is most likely the machine's LAN IP address. <p/> This method is intended for use as a r
ecj/src/main/java/ec/util/LocalHost.java:44
↓ 8 callersMethodgetTestPopulation
()
ecj/src/test/java/ec/multiobjective/nsga2/NSGA2BreederTest.java:250
↓ 8 callersMethodlightClone
()
contrib/xholon/ec/gp/GPNode.java:394
↓ 8 callersMethodloadElites
Extract the elite individuals from the current population and <i>both</i> place in newpop <i>and</i> replace the current population with the archive.
ecj/src/main/java/ec/multiobjective/nsga2/NSGA2Breeder.java:83
↓ 8 callersMethodnextDouble
Returns a random double in the half-open range from [0.0,1.0). Thus 0.0 is a valid result but 1.0 is not.
ecj/src/main/java/ec/util/MersenneTwisterFast.java:864
↓ 8 callersMethodphenotype
From the given genome position, determine the phenotype (int version)
contrib/cgp/ec/cgp/representation/VectorSpeciesCGP.java:96
↓ 8 callersMethodpickFromDistribution
Picks a random item from an array of probabilities, normalized and summed as follows: For example, if four probabilities are {0.3, 0.
ecj/src/main/java/ec/util/RandomChoice.java:374
↓ 8 callersMethodpositionFromNodeNumber
Determine the start position of the given node number. WARNING: do not call this with a nodeNumber < numInputs, because the inputs are not represented
contrib/cgp/ec/cgp/representation/VectorSpeciesCGP.java:190
↓ 8 callersMethodprepareToProduce
(final EvolutionState state, final int subpopulation, final int thread)
ecj/src/main/java/ec/es/ESSelection.java:56
↓ 8 callersMethodproduce
Produces <i>n</i> individuals from the given subpopulation and puts them into inds[start...start+n-1], where n = Min(Max(q,min),max)
ecj/src/main/java/ec/BreedingSource.java:180
↓ 8 callersMethodsetComponents
(final EvolutionState state, final Collection<T> newComponents)
ecj/src/main/java/ec/co/ConstructiveIndividual.java:68
↓ 8 callersMethodsetup
(final EvolutionState state, final Parameter base)
ecj/src/main/java/ec/simple/SimpleBreeder.java:113
↓ 8 callersMethodsuicide
Removes the agent from the base. <b>Look out!</b> The method that calls this method will not exit, the thread will not be stopped as a result. It only
contrib/drm/ec/drm/EvolutionAgent.java:108
↓ 8 callersMethodusingElitism
(int subpopulation)
ecj/src/main/java/ec/simple/SimpleBreeder.java:87
↓ 7 callersMethodaddRule
Add a rule directly to the rule set. Does not copy the rule.
ecj/src/main/java/ec/rule/RuleSet.java:220
↓ 7 callersMethodbase
()
ecj/src/main/java/ec/neat/NEATDefaults.java:21
↓ 7 callersMethodbase
Returns the default base.
ecj/src/main/java/ec/gp/push/PushDefaults.java:11
↓ 7 callersMethodbase
Returns the default base, which is built off of the GPDefaults base.
ecj/src/main/java/ec/gp/koza/GPKozaDefaults.java:34
↓ 7 callersMethodcontains
(final T component)
ecj/src/main/java/ec/co/ConstructiveIndividual.java:86
↓ 7 callersMethodcreateTestIndividual
Create a DoubleVectorIndividual with the given genome.
ecj/src/test/java/ec/simple/SimpleGroupedEvaluatorTest.java:97
↓ 7 callersMethodcreateTestIndividual
(final double[] trialValues, final int geneValue)
ecj/src/test/java/ec/select/LexicaseSelectionTest.java:99
↓ 7 callersMethoddesirability
@return The heuristic value of the component (higher is better).
ecj/src/main/java/ec/co/Component.java:24
↓ 7 callersMethodexitWithError
(Output output, String message, boolean throwException)
ecj/src/main/java/ec/util/Output.java:126
↓ 7 callersMethodgetComponents
()
ecj/src/main/java/ec/co/ConstructiveIndividual.java:62
↓ 7 callersMethodgetConversionCharacter
Get the conversion character that tells what type of control character this instance has. @return the conversion character.
contrib/drm/drm/util/PrintfFormat.java:959
↓ 7 callersMethodgetDRM
This returns a reference through which information about the hosting DRM can be requested. @throws ClassCastException If the IDRM interface is not imp
contrib/drm/ec/drm/EvolutionAgent.java:133
↓ 7 callersMethodgetFloatWithDefault
Searches down through databases to find a given parameter, which must be a float. If there is an error in parsing the parameter, then default is retur
ecj/src/main/java/ec/util/ParameterDatabase.java:1130
↓ 7 callersMethodgetJob
Returns job name. Every agent is part of a job. This returns the name of that job.
contrib/drm/drm/agentbase/IAgent.java:77
↓ 7 callersMethodgetLiteral
Get the String for this instance. Translate any escape sequences. @return s the stored String.
contrib/drm/drm/util/PrintfFormat.java:909
↓ 7 callersMethodgetTestPopParetoFront
()
ecj/src/test/java/ec/multiobjective/spea2/SPEA2BreederTest.java:427
↓ 7 callersMethodinterrupt
()
ecj/src/main/java/ec/util/ThreadPool.java:66
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