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Functions297 in github.com/Chihiro-n/csiro-biomass-agentic-solution

Method__init__
(self, df, transform, image_dir)
EXP/EXP060/infer_ttt.py:80
Method__init__
(self, df, transform, image_dir, target_cols, augmentation=None)
EXP/EXP060/infer_ttt.py:111
Method__init__
(self, model_name="EVA02-CLIP-L-14-336", pretrained="eva_clip", dropout=0.3, hidden_dim=512,
EXP/EXP060/infer_ttt.py:187
Method__init__
(self, weight_total=0.5, weight_gdm=0.2, weight_green=0.1, weight_dead=0.1, weight_clover=0.1
EXP/EXP060/infer_ttt.py:277
Method__init__
(self, lambda_=1.0)
EXP/EXP113/train.py:107
Method__init__
(self, df, transform, image_dir, train_target_cols, all_target_cols, augmentation=None, depth
EXP/EXP113/train.py:239
Method__init__
(self, df, transform, image_dir, all_target_cols, depth_dir=None, patch_size=32, hand_label_d
EXP/EXP113/train.py:400
Method__init__
(self, df, transform, image_dir, all_target_cols)
EXP/EXP113/train.py:499
Method__init__
(self, model_name="vit_huge_plus_patch16_dinov3_qkvb", pretrained=True, dropout=0.3, hidden_d
EXP/EXP113/train.py:566
Method__init__
( self, embed_dim: int, hidden_dim: int = 128, dilation: int =
EXP/EXP113/train.py:766
Method__init__
(self, embed_dim: int, hidden_dim: int = 256, out_dim: int = 5)
EXP/EXP113/train.py:816
Method__init__
(self, model_name="vit_huge_plus_patch16_dinov3_qkvb", pretrained=True, hidden_dim=256, densi
EXP/EXP113/train.py:857
Method__init__
(self, df, transform, image_dir)
EXP/EXP113/infer.py:97
Method__init__
(self, model_name="vit_huge_plus_patch16_dinov3_qkvb", pretrained=False, dropout=0.3, hidden_
EXP/EXP113/infer.py:165
Method__init__
( self, embed_dim: int, hidden_dim: int = 128, dilation: int =
EXP/EXP113/infer.py:317
Method__init__
(self, embed_dim: int, hidden_dim: int = 256, out_dim: int = 5)
EXP/EXP113/infer.py:352
Method__init__
(self, model_name="vit_huge_plus_patch16_dinov3_qkvb", pretrained=False, hidden_dim=256, dens
EXP/EXP113/infer.py:375
Method__init__
(self, embed_dim: int, hidden_dim: int = 256, out_dim: int = 5)
EXP/EXP113/infer_fast.py:81
Method__init__
(self, model_name="vit_huge_plus_patch16_dinov3_qkvb", hidden_dim=256, density_head_type="con
EXP/EXP113/infer_fast.py:109
Method__iter__
(self)
EXP/EXP060/train.py:3942
Method__len__
(self)
EXP/EXP060/train.py:1151
Method__len__
(self)
EXP/EXP060/train.py:1291
Method__len__
(self)
EXP/EXP060/train.py:1374
Method__len__
(self)
EXP/EXP060/train.py:1451
Method__len__
(self)
EXP/EXP060/train.py:1506
Method__len__
(self)
EXP/EXP060/train.py:1581
Method__len__
(self)
EXP/EXP060/train.py:1640
Method__len__
(self)
EXP/EXP060/train.py:1692
Method__len__
(self)
EXP/EXP060/train.py:3982
Method__len__
(self)
EXP/EXP060/infer.py:105
Method__len__
(self)
EXP/EXP060/infer.py:149
Method__len__
(self)
EXP/EXP060/infer.py:223
Method__len__
(self)
EXP/EXP060/infer.py:311
Method__len__
(self)
EXP/EXP060/infer.py:375
Method__len__
(self)
EXP/EXP060/infer.py:444
Method__len__
(self)
EXP/EXP060/infer.py:495
Method__len__
(self)
EXP/EXP060/infer_ttt.py:86
Method__len__
(self)
EXP/EXP060/infer_ttt.py:119
Method__len__
(self)
EXP/EXP060/infer_ttt.py:160
Method__len__
(self)
EXP/EXP113/train.py:310
Method__len__
(self)
EXP/EXP113/train.py:441
Method__len__
(self)
EXP/EXP113/train.py:507
Method__len__
(self)
EXP/EXP113/infer.py:61
Method__len__
(self)
EXP/EXP113/infer.py:103
Method__len__
(self)
EXP/EXP113/infer_fast.py:55
Functiondownscale_then_upscale
(image, **kwargs)
EXP/EXP060/train.py:995
Methodforward
(ctx, x, lambda_)
EXP/EXP060/train.py:115
Methodforward
(self, x)
EXP/EXP060/train.py:140
Methodforward
Forward pass. Args: x: [B, C, H, W] preprocessed images Returns: pred_total, pred_gdm, pred_green:
EXP/EXP060/train.py:1989
Methodforward
(self, pred_total, pred_gdm, pred_green, target_total, target_gdm, target_green)
EXP/EXP060/train.py:2021
Methodforward
Forward pass. Args: x: [B, C, H, W] preprocessed images Returns: pred_total, pred_gdm, pred_green,
EXP/EXP060/train.py:2201
Methodforward
(self, x)
EXP/EXP060/train.py:2316
Methodforward
(self, x)
EXP/EXP060/train.py:2432
Methodforward
Forward pass with Height FiLM conditioning. Args: x: Image tensor [B, C, H, W] height_gt: Ground truth heigh
EXP/EXP060/train.py:2604
Methodforward
Forward pass. Args: x: [B, C, H, W] preprocessed images return_variance: If True, return (mu, var) tuples. I
EXP/EXP060/train.py:2772
Methodforward
(self, x)
EXP/EXP060/train.py:2903
Methodforward
Forward pass. Args: x: [B, C, H, W] preprocessed images Returns: pred_total, pred_gdm, pred_green,
EXP/EXP060/train.py:3026
Methodforward
Forward pass. Args: x: [B, C, H, W] preprocessed images (float16) Returns: pred_total, pred_gdm, pr
EXP/EXP060/train.py:3194
Methodforward
Forward pass. Args: x: [B, C, H, W] preprocessed images return_logits: if True, return raw logits; if False,
EXP/EXP060/train.py:3445
Methodforward
Calculate weighted CrossEntropy loss. Args: logits_*: [B, num_bins] raw logits target_*: [B, 1] continuous t
EXP/EXP060/train.py:3510
Methodforward
Calculate weighted prediction loss + consistency loss. Returns: total_loss, pred_loss, consistency_loss, individual loss
EXP/EXP060/train.py:3621
Methodforward
Calculate Gaussian NLL loss + consistency loss. Args: mu_*: [B, 1] predicted means for each target var_*: [B
EXP/EXP060/train.py:3741
Methodforward
Compute weighted ranking loss across all 5 targets. Args: pred_*: (B, 1) predictions for each target true_*:
EXP/EXP060/train.py:3872
Methodforward
Forward pass. Args: x: [B, C, H, W] preprocessed images Returns: pred_total, pred_gdm, pred_green:
EXP/EXP060/infer.py:627
Methodforward
Forward pass. Args: x: [B, C, H, W] preprocessed images Returns: pred_total, pred_gdm, pred_green,
EXP/EXP060/infer.py:815
Methodforward
(self, x)
EXP/EXP060/infer.py:906
Methodforward
(self, x)
EXP/EXP060/infer.py:974
Methodforward
(self, x)
EXP/EXP060/infer.py:1065
Methodforward
Forward pass - returns only mu (mean) predictions for inference. Returns: (mu_total, mu_gdm, mu_green, mu_dead, mu_clove
EXP/EXP060/infer.py:1153
Methodforward
Forward pass with Height FiLM conditioning. For inference, always uses predicted height. Returns: Tuple of (pred
EXP/EXP060/infer.py:1263
Methodforward
(self, x)
EXP/EXP060/infer_ttt.py:261
Methodforward
(self, pred_total, pred_gdm, pred_green, pred_dead, pred_clover, target_total, target_gdm, tar
EXP/EXP060/infer_ttt.py:288
Methodforward
(ctx, x, lambda_)
EXP/EXP113/train.py:89
Methodforward
(self, x)
EXP/EXP113/train.py:114
Methodforward
Forward pass. Args: x: Input tensor [B, C, H, W] return_components: If True, also return global preds and de
EXP/EXP113/train.py:651
Methodforward
(self, x)
EXP/EXP113/train.py:800
Methodforward
Args: x_2d: [B, D, H, W] - patch features in 2D spatial format Returns: density: [B, 5, H, W]
EXP/EXP113/train.py:843
Methodforward
Forward pass. Args: x: Input tensor [B, C, H, W] depth: Optional depth tensor [B, 1, H, W] for weighted inte
EXP/EXP113/train.py:1154
Methodforward
(self, pred_total, pred_gdm, pred_green, pred_dead, pred_clover, target_total, target_gdm, tar
EXP/EXP113/train.py:1395
Methodforward
Forward pass. Args: x: [B, C, H, W] preprocessed images Returns: pred_total, pred_gdm, pred_green,
EXP/EXP113/infer.py:231
Methodforward
(self, x)
EXP/EXP113/infer.py:343
Methodforward
(self, x_2d)
EXP/EXP113/infer.py:368
Methodforward
Forward pass.
EXP/EXP113/infer.py:531
Methodforward
(self, x_2d)
EXP/EXP113/infer_fast.py:94
Methodforward
(self, x)
EXP/EXP113/infer_fast.py:206
Functioninternvit_transform
Transform for InternViT using CLIPImageProcessor.
EXP/EXP060/train.py:4835
Methodtrain
Override train to keep backbone in eval mode (frozen).
EXP/EXP113/infer.py:517
Methodunfreeze_last_n_blocks
Unfreeze the last n transformer blocks of the vision encoder. Args: n: Number of blocks to unfreeze from the end
EXP/EXP060/train.py:1972
Methodunfreeze_last_n_blocks
Unfreeze the last n transformer blocks of the vision encoder. Args: n: Number of blocks to unfreeze from the end
EXP/EXP060/train.py:2184
Methodunfreeze_last_n_blocks
(self, n)
EXP/EXP060/train.py:2419
Methodunfreeze_last_n_blocks
(self, n)
EXP/EXP060/train.py:2589
Methodunfreeze_last_n_blocks
(self, n)
EXP/EXP060/train.py:2764
Methodunfreeze_last_n_blocks
(self, n)
EXP/EXP060/train.py:2895
Methodunfreeze_last_n_blocks
Unfreeze the last n transformer blocks of the vision encoder.
EXP/EXP060/train.py:3014
Methodunfreeze_last_n_blocks
Unfreeze the last n transformer blocks of the vision encoder.
EXP/EXP060/train.py:3182
Methodunfreeze_last_n_blocks
Unfreeze the last n transformer blocks.
EXP/EXP060/train.py:3436
Methodunfreeze_last_n_blocks
(self, n)
EXP/EXP113/train.py:643
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