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Functions297 in github.com/Chihiro-n/csiro-biomass-agentic-solution

↓ 1 callersFunctionload_config
Load YAML configuration file.
EXP/EXP113/train.py:139
↓ 1 callersFunctionload_config
Load YAML configuration file.
EXP/EXP113/infer_fast.py:34
↓ 1 callersFunctionload_model_fast
Load model with FP16 optimization.
EXP/EXP113/infer_fast.py:421
↓ 1 callersFunctionmain
()
EXP/EXP060/train.py:6487
↓ 1 callersFunctionmain
()
EXP/EXP060/infer.py:2414
↓ 1 callersFunctionmain
()
EXP/EXP060/infer_ttt.py:981
↓ 1 callersFunctionmain
()
EXP/EXP113/train.py:2744
↓ 1 callersFunctionmain
()
EXP/EXP113/infer.py:1206
↓ 1 callersFunctionmain
()
EXP/EXP113/infer_fast.py:729
↓ 1 callersFunctionmixup_data
Mixup augmentation for regression tasks. Combines two samples with random interpolation: x_new = lambda * x_i + (1-lambda) * x_j
EXP/EXP060/train.py:1791
↓ 1 callersFunctionpredict_fast
Fast prediction with FP16 and no TTA. Args: use_fp16: Enable FP16 inference use_autocast: If True, use autocast (for img_siz
EXP/EXP113/infer_fast.py:297
↓ 1 callersFunctionpredict_mc
Monte Carlo prediction with PatchDropout for ensemble diversity. Args: mc_samples: Number of MC samples to average patch_dro
EXP/EXP113/infer_fast.py:348
↓ 1 callersFunctionpredict_one_fold
Run prediction with one fold model on split images (supports both 3-head and 5-head). For each image: - Predict left half - Predict
EXP/EXP060/infer.py:1294
↓ 1 callersFunctionpredict_one_fold
Run prediction with one fold model (with optional TTA). For each image: - Split into left/right halves - Predict each half - Sum
EXP/EXP113/infer.py:607
↓ 1 callersFunctionpredict_one_fold_3crop
Run 3-crop prediction with one fold model (matches train.py validate_oof_3crop). For each image: - Predict left, center, right crops
EXP/EXP060/infer.py:1436
↓ 1 callersFunctionpreds_dict_to_5_arrays
Convert preds_np (keys: total,gdm,green[,dead,clover]) into 5 target arrays. For 3-head models, dead/clover are derived with non-negativity c
EXP/EXP060/infer.py:2151
↓ 1 callersFunctionpreds_dict_to_5_arrays
Convert preds_np dict to 5 target arrays.
EXP/EXP113/infer.py:1191
↓ 1 callersFunctionrun_inference_fast
Fast inference without TTA. Args: debug_mode: If True, use train data for debugging/batch size estimation debug_n: Number of
EXP/EXP113/infer_fast.py:489
↓ 1 callersFunctionrun_ttt_inference
Main Test Time Training inference function. 1. Load test data and generate pseudo labels with pre-trained models 2. For each fold, re-tr
EXP/EXP060/infer_ttt.py:504
↓ 1 callersMethodset_epoch
Set epoch for seed variation (call at start of each epoch).
EXP/EXP060/train.py:1370
↓ 1 callersMethodset_grl_lambda
Set the GRL lambda value for domain adversarial training.
EXP/EXP060/train.py:2427
↓ 1 callersMethodset_grl_lambda
Set the GRL lambda value for domain adversarial training.
EXP/EXP113/train.py:1082
↓ 1 callersMethodset_lambda
(self, lambda_)
EXP/EXP060/train.py:137
↓ 1 callersMethodset_lambda
(self, lambda_)
EXP/EXP113/train.py:111
↓ 1 callersFunctionset_seed
Set random seed for reproducibility.
EXP/EXP060/train.py:1028
↓ 1 callersFunctionset_seed
Set random seed for reproducibility.
EXP/EXP113/train.py:216
↓ 1 callersFunctionsetup_evaclip_if_needed
Setup EVA-CLIP repository if model requires it. Args: config: Configuration dict Returns: bool: True if setup was succe
EXP/EXP060/train.py:174
↓ 1 callersFunctionsetup_evaclip_path
Add EVA-CLIP repository to sys.path. Args: custom_path: Optional custom path to EVA-CLIP repo (e.g., '/kaggle/input/my-evaclip-repo/
EXP/EXP060/infer.py:58
↓ 1 callersFunctionsetup_evaclip_path
Add EVA-CLIP repository to sys.path.
EXP/EXP060/infer_ttt.py:55
↓ 1 callersFunctionsmooth_l1_loss_with_beta
Smooth L1 (Huber) loss with explicit beta for compatibility across PyTorch versions. Matches torch.nn.SmoothL1Loss(beta=beta, reduction='mea
EXP/EXP060/train.py:1824
↓ 1 callersFunctiontrain_fold
Train a single fold with gradual unfreezing.
EXP/EXP060/train.py:4789
↓ 1 callersFunctiontrain_fold
Train a single fold with gradual unfreezing.
EXP/EXP113/train.py:1946
↓ 1 callersFunctiontrain_one_epoch
Train for one epoch (supports both 3-head and 5-head models, including binning and Gaussian). Args: mixup_alpha: Beta distribution p
EXP/EXP060/train.py:4122
↓ 1 callersFunctiontrain_one_epoch
Train for one epoch with component logging and optional auxiliary tasks.
EXP/EXP113/train.py:1726
↓ 1 callersFunctiontrain_one_epoch_view_consistency
Train for one epoch with View Consistency regularization. Uses BiomassDatasetSplitViewConsistency which returns (orig, flip) pairs. Enfo
EXP/EXP060/train.py:4579
↓ 1 callersFunctionvalidate_oof
Validate using OOF approach - sum predictions from left and right halves. Supports standard 3-head, 5-head, and Gaussian (10-output) models.
EXP/EXP060/train.py:4645
↓ 1 callersFunctionvalidate_oof
Validate using OOF approach (sum left + right predictions).
EXP/EXP113/train.py:1895
↓ 1 callersFunctionvalidate_oof_3crop
Validate using OOF approach with 3-crop - sum predictions from left, center, right and multiply by 2/3. Supports standard 3-head, 5-head, and
EXP/EXP060/train.py:4714
↓ 1 callersFunctionvalidate_oof_predictions
Compare inference predictions with OOF predictions to verify inference pipeline. This function: 1. Loads OOF predictions 2. Matches
EXP/EXP060/infer.py:2266
Method__getitem__
(self, idx)
EXP/EXP060/train.py:1155
Method__getitem__
(self, idx)
EXP/EXP060/train.py:1294
Method__getitem__
(self, idx)
EXP/EXP060/train.py:1378
Method__getitem__
(self, idx)
EXP/EXP060/train.py:1454
Method__getitem__
(self, idx)
EXP/EXP060/train.py:1509
Method__getitem__
(self, idx)
EXP/EXP060/train.py:1584
Method__getitem__
(self, idx)
EXP/EXP060/train.py:1643
Method__getitem__
(self, idx)
EXP/EXP060/train.py:1710
Method__getitem__
(self, idx)
EXP/EXP060/infer.py:108
Method__getitem__
(self, idx)
EXP/EXP060/infer.py:152
Method__getitem__
(self, idx)
EXP/EXP060/infer.py:253
Method__getitem__
(self, idx)
EXP/EXP060/infer.py:329
Method__getitem__
(self, idx)
EXP/EXP060/infer.py:384
Method__getitem__
(self, idx)
EXP/EXP060/infer.py:462
Method__getitem__
(self, idx)
EXP/EXP060/infer.py:498
Method__getitem__
(self, idx)
EXP/EXP060/infer_ttt.py:89
Method__getitem__
(self, idx)
EXP/EXP060/infer_ttt.py:122
Method__getitem__
(self, idx)
EXP/EXP060/infer_ttt.py:163
Method__getitem__
(self, idx)
EXP/EXP113/train.py:313
Method__getitem__
(self, idx)
EXP/EXP113/train.py:444
Method__getitem__
(self, idx)
EXP/EXP113/train.py:510
Method__getitem__
(self, idx)
EXP/EXP113/infer.py:64
Method__getitem__
(self, idx)
EXP/EXP113/infer.py:106
Method__getitem__
(self, idx)
EXP/EXP113/infer_fast.py:58
Method__init__
(self, lambda_=1.0)
EXP/EXP060/train.py:133
Method__init__
(self, df, transform, image_dir, train_target_cols, all_target_cols, augmentation=None, aux_s
EXP/EXP060/train.py:1102
Method__init__
(self, df, transform, image_dir, train_target_cols, all_target_cols, augmentation=None, aux_s
EXP/EXP060/train.py:1256
Method__init__
(self, df, transform, image_dir, train_target_cols, all_target_cols, augmentation=None)
EXP/EXP060/train.py:1358
Method__init__
(self, df, transform, image_dir, all_target_cols)
EXP/EXP060/train.py:1443
Method__init__
(self, df, transform, image_dir, train_target_cols, all_target_cols, augmentation=None, flip_
EXP/EXP060/train.py:1494
Method__init__
(self, df, transform, image_dir, all_target_cols)
EXP/EXP060/train.py:1573
Method__init__
(self, df, transform, image_dir, all_target_cols)
EXP/EXP060/train.py:1632
Method__init__
(self, df, transform, image_dir, train_target_cols, all_target_cols, augmentation=None, mosaic_prob=0.5)
EXP/EXP060/train.py:1680
Method__init__
(self, model_name="EVA02-CLIP-L-14-336", pretrained="eva_clip", dropout=0.3, hidden_dim=512)
EXP/EXP060/train.py:1891
Method__init__
(self, weight_total=0.5, weight_gdm=0.2, weight_green=0.1)
EXP/EXP060/train.py:2014
Method__init__
( self, model_name="EVA02-CLIP-L-14-336", pretrained="eva_clip", dropout=0.3,
EXP/EXP060/train.py:2046
Method__init__
(self, model_name="eva02_large_patch14_448.mim_m38m_ft_in22k_in1k", pretrained=True, dropout=
EXP/EXP060/train.py:2254
Method__init__
(self, model_name="eva02_large_patch14_448.mim_m38m_ft_in22k_in1k", pretrained=True, dropout=
EXP/EXP060/train.py:2335
Method__init__
Args: model_name: timm model name pretrained: use pretrained weights dropout: dropout rate for heads
EXP/EXP060/train.py:2493
Method__init__
(self, model_name="eva02_large_patch14_448.mim_m38m_ft_in22k_in1k", pretrained=True, dropout=
EXP/EXP060/train.py:2681
Method__init__
(self, model_name="vit_huge_plus_patch16_dinov3_qkvb", pretrained=True, dropout=0.3, hidden_d
EXP/EXP060/train.py:2819
Method__init__
(self, model_name="timm/eva02_large_patch14_clip_336.merged2b_ft_inat21", pretrained=True, dr
EXP/EXP060/train.py:2938
Method__init__
(self, model_name="OpenGVLab/InternViT-300M-448px", pretrained=True, dropout=0.3, hidden_dim=
EXP/EXP060/train.py:3064
Method__init__
( self, model_name="EVA02-CLIP-L-14-336", pretrained="eva_clip", dropout=0.3,
EXP/EXP060/train.py:3326
Method__init__
(self, r2_weights, consistency_weight=0.1, view_consistency_weight=0.0, pred_loss_cfg=None)
EXP/EXP060/train.py:3576
Method__init__
(self, r2_weights, consistency_weight=0.1, log_var_min=-6.0, log_var_max=3.0, eps=1e-6)
EXP/EXP060/train.py:3722
Method__init__
(self, margin=2.0, target_weights=None)
EXP/EXP060/train.py:3806
Method__init__
(self, targets, batch_size, n_bins=10, shuffle=True, drop_last=False)
EXP/EXP060/train.py:3918
Method__init__
(self, df, transform, image_dir)
EXP/EXP060/infer.py:99
Method__init__
(self, df, transform, image_dir)
EXP/EXP060/infer.py:143
Method__init__
(self, df, transform, image_dir, crop_scale: float = 0.95)
EXP/EXP060/infer.py:211
Method__init__
( self, df, transform, image_dir, brightness_delta: float = 0.10,
EXP/EXP060/infer.py:288
Method__init__
( self, df, transform, image_dir, blur_radius: float = 0.5, )
EXP/EXP060/infer.py:359
Method__init__
( self, df, transform, image_dir, blur_radius: float = 0.5, )
EXP/EXP060/infer.py:425
Method__init__
(self, df, transform, image_dir)
EXP/EXP060/infer.py:489
Method__init__
(self, model_name="EVA02-CLIP-L-14-336", pretrained="eva_clip", dropout=0.3, hidden_dim=512,
EXP/EXP060/infer.py:525
Method__init__
( self, model_name="EVA02-CLIP-L-14-336", pretrained="eva_clip", dropout=0.3,
EXP/EXP060/infer.py:662
Method__init__
(self, model_name="eva02_large_patch14_448.mim_m38m_ft_in22k_in1k", pretrained=True, dropout=
EXP/EXP060/infer.py:919
Method__init__
(self, model_name="vit_huge_plus_patch16_dinov3_qkvb", pretrained=True, dropout=0.3, hidden_d
EXP/EXP060/infer.py:995
Method__init__
(self, model_name="eva02_large_patch14_448.mim_m38m_ft_in22k_in1k", pretrained=True, dropout=
EXP/EXP060/infer.py:1095
Method__init__
(self, model_name="vit_huge_plus_patch16_dinov3_qkvb", pretrained=False, dropout=0.3, hidden_
EXP/EXP060/infer.py:1188
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