Code
Hub
Workspaces
Following
Trending
Connect
MCP
copy
Create free account
hub
/
github.com/COMBINE-lab/alevin-fry
/ functions
Functions
221 in github.com/COMBINE-lab/alevin-fry
⨍
Functions
221
◇
Types & classes
43
Function
setup_rad_reader
Initialize the RAD reader with parallel processing
src/cellfilter.rs:1543
Function
spliced_idx_of
(idx: u32, usa_offset: (usize, usize))
src/em.rs:76
Function
std_deviation
(data: &[f64])
src/em.rs:55
Function
temp_prob_map_add
()
src/eq_class.rs:1077
Function
temp_prob_map_iter
()
src/eq_class.rs:1093
Function
test_collation_manifest_roundtrip
()
tests/multi_barcode_integration.rs:1018
Function
test_generate_whitelist_hash
()
src/utils.rs:1215
Function
test_get_all_indels
()
src/utils.rs:1188
Function
test_get_all_one_edit_neighbors
()
src/utils.rs:1197
Function
test_get_all_snps
()
src/utils.rs:1180
Function
test_get_bit_mask
()
src/utils.rs:1170
Function
test_multi_bc_collate_and_quant_preserve_sample_cell_identity
()
tests/multi_barcode_integration.rs:430
Function
test_multi_bc_generate_permit_list
()
tests/multi_barcode_integration.rs:337
Function
test_multi_bc_quant_flexv2_real_data
()
tests/multi_barcode_integration.rs:808
Function
test_multi_bc_quant_handles_sparse_sample_positions
()
tests/multi_barcode_integration.rs:571
Function
test_read_real_flex_rad
()
tests/multi_barcode_integration.rs:1053
Function
test_synthetic_rad_roundtrip
()
tests/multi_barcode_integration.rs:262
Function
test_version_info
()
src/utils.rs:1157
Method
to_possible_value
(&self)
src/cmd_parse_utils.rs:26
Method
value_variants
()
src/cmd_parse_utils.rs:14
Function
write_permit_list_freq_dashmap
Write the permit_freq.bin and all_freq.bin files
src/utils.rs:438
← previous
201–221 of 221, ranked by callers