| 1663 | } |
| 1664 | |
| 1665 | ChrCopyNumber GenomeCopyNumber::getChrCopyNumber(std::string const& chr) { |
| 1666 | int index = findIndex(chr); |
| 1667 | if (index==NA) throw "No such chromosome"; |
| 1668 | return chrCopyNumber_[index]; |
| 1669 | } |
| 1670 | void GenomeCopyNumber::printRatio(std::string const& outFile, bool ifBedGraphOutPut, bool printNA) { |
| 1671 | std::ofstream file (outFile.c_str()); |
| 1672 | map<string,int>::iterator it; |
no outgoing calls
no test coverage detected