Method writeGraph

src/rnabloom/olc/Layout.java:2767–2774

(String path)

    }
    
    private void writeGraph(String path) throws IOException {
        Writer writer = getTextFileWriter(path, false);
        for (OverlapEdge e : graph.edgeSet()) {
            writer.write(graph.getEdgeSource(e) + " -> " + graph.getEdgeTarget(e) +
                    " [o=" + (e.sinkEnd-e.sinkStart + e.sourceEnd-e.sourceStart)/2 + "]\n");
        }
        writer.close();
    }
        
    private class TargetOverlapComparator implements Comparator<Overlap> {
        @Override