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Functions1,745 in github.com/ANTsX/ANTs

↓ 1,135 callersMethodGetFunction
Utilities/antsCommandLineOption.h:144
↓ 561 callersMethodUpdate
Aliased to the Write() method to be consistent with the rest of the * pipeline. */
Utilities/itkVectorImageFileWriter.h:142
↓ 474 callersMethodSetUsageOption
Utilities/antsCommandLineOption.cxx:70
↓ 460 callersMethodGetOption
Utilities/antsCommandLineParser.cxx:303
↓ 458 callersMethodSetInput
Utilities/BinaryImageToMeshFilter.h:128
↓ 392 callersMethodGetNumberOfFunctions
Utilities/antsCommandLineOption.h:138
↓ 382 callersMethodGetParameter
Utilities/antsCommandLineOption.h:89
↓ 364 callersMethodAddOption
Utilities/antsCommandLineParser.cxx:59
↓ 287 callersMethodGetNumberOfParameters
Utilities/antsCommandLineOption.h:103
↓ 84 callersMethodSetInputImage
Set input */
Utilities/itkVectorGaussianInterpolateImageFunction.h:99
↓ 83 callersMethodGetGraphNode
Temporary/itkDijkstrasAlgorithm.h:503
↓ 71 callersMethodPrintMenu
Utilities/antsCommandLineParser.cxx:358
↓ 63 callersMethodGetParameters
Utilities/antsCommandLineOption.h:76
↓ 54 callersMethodGetValue
Utilities/itkTextureHistogram.h:63
↓ 51 callersMethodGetPointData
ImageRegistration/itkANTSLabeledPointSet.h:69
↓ 48 callersFunctionConvertToLowerCase
Examples/antsUtilities.cxx:230
↓ 45 callersMethodSetTransform
ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h:308
↓ 44 callersMethodSetInterpolator
ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h:320
↓ 42 callersMethodWrite
ImageRegistration/itkANTSImageTransformation.cxx:56
↓ 38 callersMethodUpdate
ImageSegmentation/antsListSampleToListSampleFilter.h:67
↓ 37 callersMethodSetFixedImage
Set the fixed image. */
ImageRegistration/itkAvantsPDEDeformableRegistrationFunction.h:96
↓ 37 callersMethodSetMovingImage
Set the moving image. */
ImageRegistration/itkAvantsPDEDeformableRegistrationFunction.h:82
↓ 35 callersMethodGetFixedImage
Get the fixed image. */
ImageRegistration/itkAvantsPDEDeformableRegistrationFunction.h:103
↓ 35 callersMethodSetParameters
Utilities/antsCommandLineOption.h:82
↓ 33 callersMethodAddFunction
Utilities/antsCommandLineOption.cxx:29
↓ 30 callersMethodSetPoint
ImageRegistration/itkANTSLabeledPointSet.h:78
↓ 29 callersMethodSetSplineOrder
ImageRegistration/itkJensenTsallisBSplineRegistrationFunction.h:288
↓ 28 callersMethodEvaluateAtContinuousIndex
Utilities/itkVectorFieldGradientImageFunction.h:94
↓ 28 callersMethodParse
Utilities/antsCommandLineParser.cxx:86
↓ 27 callersFunctionCheckFileType
Examples/antsUtilities.cxx:18
↓ 23 callersMethodGetPoint
ImageRegistration/itkANTSLabeledPointSet.h:60
↓ 23 callersMethodGetTotalCost
Temporary/itkDijkstrasAlgorithm.h:627
↓ 22 callersMethodEvaluate
* Evaluate Jacobian */
Utilities/itkVectorFieldGradientImageFunction.h:82
↓ 21 callersMethodGetMovingImage
Get the moving image. */
ImageRegistration/itkAvantsPDEDeformableRegistrationFunction.h:89
↓ 20 callersMethodSetDirectionCollapseToIdentity
\sa SetDirectionCollapseToStrategy */
Utilities/itkAverageOverDimensionImageFilter.h:196
↓ 20 callersMethodSetDirectionCollapseToSubmatrix
\sa SetDirectionCollapseToStrategy */
Utilities/itkAverageOverDimensionImageFilter.h:203
↓ 20 callersMethodSetNumberOfIterations
Examples/antsMotionCorr.cxx:326
↓ 20 callersMethodWarpMultiTransform
ImageRegistration/itkANTSImageRegistrationOptimizer.h:489
↓ 18 callersMethodFitIndexInBins
find the image index in the number of histogram bins */
ImageRegistration/itkSpatialMutualInformationRegistrationFunction.h:545
↓ 18 callersMethodSetNumberOfHistogramBins
Number of bins to used in the histogram. Typical value is 50. */ itkSetClampMacro( NumberOfHistogramBins, unsigned long, 1, NumericTraits<unsigned lon
ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h:296
↓ 18 callersMethodSetPointData
ImageRegistration/itkANTSLabeledPointSet.h:84
↓ 17 callersMethodCopyDisplacementField
ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:127
↓ 17 callersMethodGetNumberOfParameters
* The only transform type used is Identity */
ImageRegistration/itkJensenHavrdaCharvatTsallisPointSetMetric.h:84
↓ 16 callersMethodSetDisplacementField
ImageRegistration/itkANTSImageTransformation.h:87
↓ 16 callersMethodSetNumberOfLevels
ImageRegistration/itkANTSImageRegistrationOptimizer.h:197
↓ 15 callersFunctionDisplayOpt
Examples/antsUtilities.cxx:184
↓ 14 callersMethodGetInputImage
* Get mask image function. */
Utilities/itkImageIntensityAndGradientToPointSetFilter.h:86
↓ 14 callersMethodSetMaskImage
* Set mask image function. If a binary mask image is specified, only * those input image voxels inside the mask image values are used. */
Utilities/itkMaskedSmoothingImageFilter.h:73
↓ 14 callersFunctionmyrand
ImageRegistration/ANTS_affine_registration.h:411
↓ 13 callersMethodEvaluateAtIndex
Utilities/itkVectorFieldGradientImageFunction.h:88
↓ 13 callersMethodGetGraphSize
Temporary/itkManifoldIntegrationAlgorithm.h:366
↓ 13 callersMethodSmoothDisplacementField
ImageRegistration/itkANTSImageRegistrationOptimizer.h:236
↓ 12 callersFunctionCheckFileExistence
Examples/antsUtilities.cxx:106
↓ 12 callersMethodSetInput1
* The image expected for input for bias correction. */
Utilities/itkN3BiasFieldCorrectionImageFilter.h:132
↓ 12 callersMethodSetInput2
Utilities/itkMaskedSmoothingImageFilter.h:78
↓ 11 callersMethodGetFixedParzenTerm
ImageRegistration/itkSpatialMutualInformationRegistrationFunction.h:535
↓ 11 callersMethodGetMovingParzenTerm
Normalizing the image to the range of [0 1] */
ImageRegistration/itkSpatialMutualInformationRegistrationFunction.h:526
↓ 10 callersMethodComposeDiffs
ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:446
↓ 10 callersMethodGetTransformationModel
ImageRegistration/itkANTSImageRegistrationOptimizer.h:800
↓ 10 callersMethodMakeImage
ImageRegistration/itkProbabilisticRegistrationFunction.h:341
↓ 10 callersMethodSetConstant
Temporary/itkAddConstantToImageFilter.h:67
↓ 10 callersMethodUpdate
Update method (why?) */
Utilities/BinaryImageToMeshFilter.h:135
↓ 9 callersFunctionDisplayOptQueue
Examples/antsUtilities.cxx:138
↓ 9 callersMethodGetDisplacementField
ImageRegistration/itkANTSImageTransformation.h:112
↓ 9 callersMethodGetInverseDisplacementField
ImageRegistration/itkANTSImageTransformation.h:118
↓ 9 callersMethodGetSplineOrder
ImageRegistration/itkJensenTsallisBSplineRegistrationFunction.h:294
↓ 9 callersMethodInitializeTransform
Initialize the mapping */
ImageRegistration/itkANTSImageTransformation.h:137
↓ 9 callersMethodIntegrateConstantVelocity
ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:526
↓ 9 callersMethodRankifyMatrixColumns
Utilities/antsSCCANObject.h:231
↓ 9 callersFunctionSetAffineInvFlag
Examples/antsUtilities.cxx:55
↓ 9 callersMethodSetAntiAliasMaxRMSError
Set the anti-aliasing quality parameter */
Utilities/BinaryImageToMeshFilter.h:142
↓ 9 callersMethodSetFixedImageMask
ImageRegistration/itkProbabilisticRegistrationFunction.h:268
↓ 8 callersFunctionANTSFileExists
Utilities/ReadWriteData.cxx:5
↓ 8 callersMethodGetCanonicalCorrelations
Utilities/antsSCCANObject.h:691
↓ 8 callersMethodSetMatrixP
Utilities/antsSCCANObject.h:270
↓ 8 callersMethodSetOptimizer
* Set Optimizer */
Examples/antsCommandIterationUpdate.h:146
↓ 8 callersMethodSubsampleImage
ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:79
↓ 7 callersMethodComputeUpdateField
ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:543
↓ 7 callersMethodGetMatrixU
Utilities/antsSCCANObject.h:339
↓ 7 callersMethodGetMaxCost
Temporary/itkManifoldIntegrationAlgorithm.h:296
↓ 7 callersMethodSetMatrixQ
Utilities/antsSCCANObject.h:289
↓ 7 callersMethodSetNumberOfFittingLevels
Utilities/itkN3MRIBiasFieldCorrectionImageFilter.h:237
↓ 7 callersMethodSetSurfaceMesh
Temporary/itkManifoldIntegrationAlgorithm.h:348
↓ 6 callersMethodComputeMetricAtPair
ImageRegistration/itkAvantsPDEDeformableRegistrationFunction.h:194
↓ 6 callersFunctionFilePartsWithgz
Examples/antsUtilities.cxx:65
↓ 6 callersMethodGetJointIntensityFusionImage
* Get the joint intensity fusion output image */
ImageSegmentation/itkWeightedVotingFusionImageFilter.h:307
↓ 6 callersMethodGetMaskImage
* Get mask image function. */
Utilities/itkMaskedSmoothingImageFilter.h:87
↓ 6 callersMethodGetValueAndDerivative
ImageRegistration/itkAvantsMutualInformationRegistrationFunction.cxx:463
↓ 6 callersMethodGetVariateP
Utilities/antsSCCANObject.h:697
↓ 6 callersMethodInitializeIteration
ImageRegistration/itkSyNDemonsRegistrationFunction.cxx:122
↓ 6 callersMethodIntegrateVelocity
ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:2396
↓ 6 callersFunctionPrintGenericUsageStatement
* print the usage and exit */
Examples/CompositeTransformUtil.cxx:68
↓ 6 callersMethodSetInverseDisplacementField
ImageRegistration/itkANTSImageTransformation.h:93
↓ 6 callersMethodSetLikelihoodFunction
* Set the likelihood function for a specified class. These functions are * traditionally characterized as parametric, i.e. Gaussian, or nonparamet
ImageSegmentation/antsAtroposSegmentationImageFilter.h:637
↓ 6 callersMethodSetMatrixR
Utilities/antsSCCANObject.h:312
↓ 6 callersMethodSetOutputSize
The output largeset possible, spacing and origin is computed as follows. * If the speed image is NULL or if the OverrideOutputInformation is true,
Temporary/antsFastMarchingImageFilter.h:307
↓ 6 callersFunctionget_cost_value_mmi
ImageRegistration/ANTS_affine_registration.h:589
↓ 5 callersFunctionANTSFileIsImage
Utilities/ReadWriteData.cxx:12
↓ 5 callersMethodEmptyQ
Temporary/itkDijkstrasAlgorithm.h:483
↓ 5 callersMethodExpandField
ImageRegistration/itkANTSImageRegistrationOptimizer.h:399
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