Function write_command_script

plugins/ngs-analysis/scripts/ngs_planner_utils.py:50–57

(
    path: Path, commands: list[str], *, header: list[str] | None = None
)

def write_command_script(
    path: Path, commands: list[str], *, header: list[str] | None = None
) -> None:
    lines = ["#!/usr/bin/env bash", "set -euo pipefail"]
    if header:
        lines.extend(header)
    lines.extend(commands)
    write_text(path, "\n".join(lines) + "\n")


def command_plan_entry(