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Method apply_function

mne/evoked.py:268–361  ·  view source on GitHub ↗

Apply a function to a subset of channels. %(applyfun_summary_evoked)s Parameters ---------- %(fun_applyfun_evoked)s %(picks_all_data_noref)s %(dtype_applyfun)s %(n_jobs)s Ignored if ``channel_wise=False`` as the workload is split

(
        self,
        fun,
        picks=None,
        dtype=None,
        n_jobs=None,
        channel_wise=True,
        *,
        verbose=None,
        **kwargs,
    )

Source from the content-addressed store, hash-verified

266
267 @verbose
268 def apply_function(
269 self,
270 fun,
271 picks=None,
272 dtype=None,
273 n_jobs=None,
274 channel_wise=True,
275 *,
276 verbose=None,
277 **kwargs,
278 ):
279 """Apply a function to a subset of channels.
280
281 %(applyfun_summary_evoked)s
282
283 Parameters
284 ----------
285 %(fun_applyfun_evoked)s
286 %(picks_all_data_noref)s
287 %(dtype_applyfun)s
288 %(n_jobs)s Ignored if ``channel_wise=False`` as the workload
289 is split across channels.
290 %(channel_wise_applyfun)s
291
292 .. versionadded:: 1.6
293 %(verbose)s
294 %(kwargs_fun)s
295
296 Returns
297 -------
298 self : instance of Evoked
299 The evoked object with transformed data.
300 """
301 _check_preload(self, "evoked.apply_function")
302 picks = _picks_to_idx(self.info, picks, exclude=(), with_ref_meg=False)
303
304 if not callable(fun):
305 raise ValueError("fun needs to be a function")
306
307 data_in = self._data
308 if dtype is not None and dtype != self._data.dtype:
309 self._data = self._data.astype(dtype)
310
311 args = getfullargspec(fun).args + getfullargspec(fun).kwonlyargs
312 if channel_wise is False:
313 if ("ch_idx" in args) or ("ch_name" in args):
314 raise ValueError(
315 "apply_function cannot access ch_idx or ch_name "
316 "when channel_wise=False"
317 )
318 if "ch_idx" in args:
319 logger.info("apply_function requested to access ch_idx")
320 if "ch_name" in args:
321 logger.info("apply_function requested to access ch_name")
322
323 # check the dimension of the incoming evoked data
324 _check_option("evoked.ndim", self._data.ndim, [2])
325

Callers

nothing calls this directly

Calls 7

_check_preloadFunction · 0.85
_picks_to_idxFunction · 0.85
_check_optionFunction · 0.85
parallel_funcFunction · 0.85
infoMethod · 0.80
_check_funFunction · 0.70
updateMethod · 0.45

Tested by

no test coverage detected