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Class Transform

mne/transforms.py:95–204  ·  view source on GitHub ↗

A transform. Parameters ---------- fro : str | int The starting coordinate frame. See notes for valid coordinate frames. to : str | int The ending coordinate frame. See notes for valid coordinate frames. trans : array of shape (4, 4) | None The transforma

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93
94
95class Transform(dict):
96 """A transform.
97
98 Parameters
99 ----------
100 fro : str | int
101 The starting coordinate frame. See notes for valid coordinate frames.
102 to : str | int
103 The ending coordinate frame. See notes for valid coordinate frames.
104 trans : array of shape (4, 4) | None
105 The transformation matrix. If None, an identity matrix will be
106 used.
107
108 Notes
109 -----
110 Valid coordinate frames are ``'meg'``, ``'mri'``, ``'mri_voxel'``,
111 ``'head'``, ``'mri_tal'``, ``'ras'``, ``'fs_tal'``, ``'ctf_head'``,
112 ``'ctf_meg'``, ``'unknown'``.
113 """
114
115 def __init__(self, fro, to, trans=None):
116 super().__init__()
117 # we could add some better sanity checks here
118 fro = _to_const(fro)
119 to = _to_const(to)
120 trans = np.eye(4) if trans is None else np.asarray(trans, np.float64)
121 if trans.shape != (4, 4):
122 raise ValueError(f"Transformation must be shape (4, 4) not {trans.shape}")
123 self["from"] = fro
124 self["to"] = to
125 self["trans"] = trans
126
127 def __repr__(self): # noqa: D105
128 with np.printoptions(suppress=True): # suppress scientific notation
129 return "<Transform | {fro}->{to}>\n{trans}".format(
130 fro=_coord_frame_name(self["from"]),
131 to=_coord_frame_name(self["to"]),
132 trans=self["trans"],
133 )
134
135 def __eq__(self, other, rtol=0.0, atol=0.0):
136 """Check for equality.
137
138 Parameter
139 ---------
140 other : instance of Transform
141 The other transform.
142 rtol : float
143 Relative tolerance.
144 atol : float
145 Absolute tolerance.
146
147 Returns
148 -------
149 eq : bool
150 True if the transforms are equal.
151 """
152 return (

Callers 15

test_use_coil_defFunction · 0.90
test_sensors_inside_bemFunction · 0.90
test_reprFunction · 0.90
test_info_badFunction · 0.90
test_add_channelsFunction · 0.90
test_transformsFunction · 0.90
test_nan_transFunction · 0.90

Calls

no outgoing calls

Tested by 15

test_use_coil_defFunction · 0.72
test_sensors_inside_bemFunction · 0.72
test_reprFunction · 0.72
test_info_badFunction · 0.72
test_add_channelsFunction · 0.72
test_transformsFunction · 0.72
test_nan_transFunction · 0.72