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Function get_transformed_data

ann_class2/util.py:70–114  ·  view source on GitHub ↗
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68
69
70def get_transformed_data():
71 print("Reading in and transforming data...")
72
73 if not os.path.exists('../large_files/train.csv'):
74 print('Looking for ../large_files/train.csv')
75 print('You have not downloaded the data and/or not placed the files in the correct location.')
76 print('Please get the data from: https://www.kaggle.com/c/digit-recognizer')
77 print('Place train.csv in the folder large_files adjacent to the class folder')
78 exit()
79
80 df = pd.read_csv('../large_files/train.csv')
81 data = df.values.astype(np.float32)
82 np.random.shuffle(data)
83
84 X = data[:, 1:]
85 Y = data[:, 0].astype(np.int32)
86
87 Xtrain = X[:-1000]
88 Ytrain = Y[:-1000]
89 Xtest = X[-1000:]
90 Ytest = Y[-1000:]
91
92 # center the data
93 mu = Xtrain.mean(axis=0)
94 Xtrain = Xtrain - mu
95 Xtest = Xtest - mu
96
97 # transform the data
98 pca = PCA()
99 Ztrain = pca.fit_transform(Xtrain)
100 Ztest = pca.transform(Xtest)
101
102 plot_cumulative_variance(pca)
103
104 # take first 300 cols of Z
105 Ztrain = Ztrain[:, :300]
106 Ztest = Ztest[:, :300]
107
108 # normalize Z
109 mu = Ztrain.mean(axis=0)
110 std = Ztrain.std(axis=0)
111 Ztrain = (Ztrain - mu) / std
112 Ztest = (Ztest - mu) / std
113
114 return Ztrain, Ztest, Ytrain, Ytest
115
116
117def get_normalized_data():

Callers 1

benchmark_pcaFunction · 0.85

Calls 3

plot_cumulative_varianceFunction · 0.85
fit_transformMethod · 0.45
transformMethod · 0.45

Tested by

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