Method Process

avida-core/source/actions/PopulationActions.cc:104–134

  static const cString GetDescription() { return "Arguments: <string fname> [int cell_id=0] [double merit=-1] [int lineage_label=0] [double neutral_metric=0] [string trace_filename]"; }
  
  void Process(cAvidaContext& ctx)
  {
    if (m_filename.GetSize() == 0) {
      cerr << "error: no organism file specified" << endl;
      m_world->GetDriver().Abort(AbortCondition::IO_ERROR);
    }
    GenomePtr genome;
    cUserFeedback feedback;
    genome = Util::LoadGenomeDetailFile(m_filename, m_world->GetWorkingDir(), m_world->GetHardwareManager(), feedback);
    for (int i = 0; i < feedback.GetNumMessages(); i++) {
      switch (feedback.GetMessageType(i)) {
        case cUserFeedback::UF_ERROR:    
          cerr << "error: "; 
          cerr << feedback.GetMessage(i) << endl;
          m_world->GetDriver().Abort(AbortCondition::GENERIC_ERROR);
          break;
        case cUserFeedback::UF_WARNING:  
          cerr << "warning: ";
          cerr << feedback.GetMessage(i) << endl; 
          break;
        default: break;
      };
    }
    if (!genome) return;
    m_world->GetPopulation().Inject(*genome, Systematics::Source(Systematics::DIVISION, "", true), ctx, m_cell_id, m_merit, m_lineage_label, m_neutral_metric, false);
    
    if (m_trace_filename.GetSize()) {
      HardwareTracerPtr tracer(new cHardwareStatusPrinter(m_world->GetNewWorld(), (const char*)m_trace_filename));
      m_world->GetPopulation().GetCell(m_cell_id).GetOrganism()->GetHardware().SetTrace(tracer);
    }
  }
};