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github.com/devosoft/avida
/ functions
Functions
9,866 in github.com/devosoft/avida
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Functions
9,866
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Types & classes
1,570
↓ 5 callers
Method
AddNode
avida-core/source/script/ASTree.h:166
↓ 5 callers
Method
AddPheromone
avida-core/source/main/cDeme.cc:1136
↓ 5 callers
Method
AsInt
avida-core/source/tools/cFlexVar.h:277
↓ 5 callers
Method
AttackFacedOrg
avida-core/source/cpu/cTestCPUInterface.h:224
↓ 5 callers
Method
AttemptImmigrateGroup
avida-core/source/cpu/cTestCPUInterface.h:212
↓ 5 callers
Method
CalcFitness
avida-core/source/main/cPhenotype.cc:1827
↓ 5 callers
Method
Clear
These functions clear sections of the screen.
avida-core/source/targets/avida-viewer/cBaseTextWindow.h:78
↓ 5 callers
Method
CountBits2
This technique is another way of counting bits; It does a bunch of clever bit tricks to do it in parallel in each int.
avida-core/source/tools/cBitArray.cc:104
↓ 5 callers
Method
DecCurInstCount
avida-core/source/main/cPhenotype.h:680
↓ 5 callers
Method
Draw
avida-core/source/targets/avida-viewer/cBarScreen.cc:25
↓ 5 callers
Method
Eof
avida-core/source/tools/cFile.h:98
↓ 5 callers
Function
EstimateCyclesPerSecond
Helper function estimates cycles/sec by observing cycles elapsed during sleep(). Using small sleep time decreases accuracy significantly.
libs/tcmalloc-1.4/src/sysinfo.cc:225
↓ 5 callers
Function
ExtractStats
Get stats into "r". Also get per-size-class counts if class_count != NULL
libs/tcmalloc-1.4/src/tcmalloc.cc:315
↓ 5 callers
Method
FlagMutated
avida-core/source/cpu/cCPUMemory.h:54
↓ 5 callers
Method
Flush
avida-core/source/output/File.cc:255
↓ 5 callers
Method
GetAVFacedDataTerritory
avida-core/source/cpu/cTestCPUInterface.h:250
↓ 5 callers
Method
GetAVFacedDataUpdate
avida-core/source/cpu/cTestCPUInterface.h:249
↓ 5 callers
Method
GetArgs
avida-core/source/analyze/cAnalyzeCommand.h:53
↓ 5 callers
Method
GetAveFitness
avida-core/source/main/cStats.h:795
↓ 5 callers
Method
GetCellOutputAVs
Returns all output avatars (organisms) contained in the cell
avida-core/source/main/cPopulationCell.cc:441
↓ 5 callers
Method
GetCumulativeReactionCount
Return the cumulative reaction count if we aren't resetting on divide. */
avida-core/source/main/cPhenotype.cc:2434
↓ 5 callers
Method
GetCurThread
avida-core/source/cpu/cHardwareBCR.h:345
↓ 5 callers
Method
GetDeathOdds
avida-core/source/main/cResource.h:241
↓ 5 callers
Method
GetDivMutProb
avida-core/source/main/cOrganism.h:343
↓ 5 callers
Method
GetEvents
avida-core/source/main/cWorld.cc:218
↓ 5 callers
Method
GetFacedCellDataTerritory
avida-core/source/cpu/cTestCPUInterface.h:80
↓ 5 callers
Method
GetFacing
! These values are chosen so as to make loops on the facing 'easy'. 111 = NE 101 = E 100 = SE 000 = S 001 = SW 011 = W 010 = NW 110 = N Fac
avida-core/source/main/cPopulationCell.cc:207
↓ 5 callers
Method
GetFracEnergyDonating
avida-core/source/main/cOrganism.h:195
↓ 5 callers
Method
GetInflowX2
avida-core/source/main/cResource.h:165
↓ 5 callers
Method
GetInflowY2
avida-core/source/main/cResource.h:167
↓ 5 callers
Method
GetInjectedCount
avida-core/source/main/cDeme.h:195
↓ 5 callers
Method
GetInput
avida-core/source/cpu/cTestCPU.h:126
↓ 5 callers
Method
GetMatePreference
@CHC
avida-core/source/main/cPhenotype.h:412
↓ 5 callers
Method
GetMaxExecuted
avida-core/source/main/cOrganism.h:176
↓ 5 callers
Method
GetMessageType
avida-core/source/tools/cUserFeedback.h:75
↓ 5 callers
Method
GetNeighborhoodCellIDs
avida-core/source/main/cPopulationInterface.cc:267
↓ 5 callers
Method
GetNumCols
avida-core/source/tools/tMatrix.h:67
↓ 5 callers
Method
GetNumNops
avida-core/source/cpu/cInstSet.h:140
↓ 5 callers
Method
GetNumRegisters
avida-core/source/cpu/cHardwareBCR.h:338
↓ 5 callers
Method
GetOutflowX1
avida-core/source/main/cResource.h:168
↓ 5 callers
Method
GetOutflowY1
avida-core/source/main/cResource.h:170
↓ 5 callers
Method
GetPermanentGermlinePropensity
avida-core/source/main/cPhenotype.h:498
↓ 5 callers
Method
GetRandPredAV
Returns the first predator (input) avatar, which should be random as the list is mixed whenever a new avatar is added
avida-core/source/main/cPopulationCell.cc:411
↓ 5 callers
Method
GetResourceByName
* TODO: This is a duplicate of GetResourceCountID() * Follow the same steps to get rid of it. */
avida-core/source/main/cResourceCount.cc:867
↓ 5 callers
Method
GetSize
* Get the size of the string (not including the terminating '\0'). **/
avida-core/source/tools/cString.h:166
↓ 5 callers
Method
GetStateAt
avida-core/source/main/cStateGrid.h:61
↓ 5 callers
Method
GetTagLabel
Get tag
avida-core/source/main/cOrganism.h:578
↓ 5 callers
Method
GetToDie
avida-core/source/main/cPhenotype.h:420
↓ 5 callers
Method
GetTotalWeight
avida-core/source/tools/cWeightedIndex.h:54
↓ 5 callers
Method
GetUpdateBorn
avida-core/source/main/cPhenotype.h:400
↓ 5 callers
Method
IncCurInstCount
avida-core/source/main/cPhenotype.h:679
↓ 5 callers
Method
IncCurrentUpdate
avida-core/source/main/cStats.h:443
↓ 5 callers
Method
IncPointMutations
number of point mutations applied to org.
avida-core/source/main/cOrganism.h:720
↓ 5 callers
Method
IsEnergyRequestor
avida-core/source/main/cPhenotype.h:546
↓ 5 callers
Method
IsFertile
avida-core/source/main/cPhenotype.h:571
↓ 5 callers
Method
IsHammer
avida-core/source/main/cResource.h:239
↓ 5 callers
Method
IsNumber
avida-core/source/tools/cString.cc:264
↓ 5 callers
Method
IsThreshold
avida-core/include/private/avida/private/systematics/Genotype.h:155
↓ 5 callers
Method
JoinGroup
avida-core/source/cpu/cTestCPUInterface.h:196
↓ 5 callers
Method
LoadStr
avida-core/source/main/cAvidaConfig.h:238
↓ 5 callers
Method
Parents
avida-core/include/private/avida/private/systematics/Genotype.h:151
↓ 5 callers
Method
PopPos
Remove by position
avida-core/source/tools/tList.h:294
↓ 5 callers
Method
PrintTasks
avida-core/source/analyze/cAnalyzeGenotype.cc:633
↓ 5 callers
Method
ProcessStep
avida-core/source/main/cPopulation.cc:5694
↓ 5 callers
Method
RateAll
avida-core/source/main/cSpatialResCount.cc:295
↓ 5 callers
Method
Redraw
avida-core/source/targets/avida-viewer/cAnalyzeView.cc:62
↓ 5 callers
Method
RegisterFunction
avida-core/source/script/cASLibrary.cc:35
↓ 5 callers
Method
ReplaceGermline
! Replacing this deme's germline has the effect of changing the deme's lineage. There's still some work to do here; the lineage labels of the Genomes
avida-core/source/main/cDeme.cc:679
↓ 5 callers
Method
Reset
avida-core/source/cpu/cHardwareGP8.cc:363
↓ 5 callers
Method
Run
avida-core/source/targets/avida-viewer/cTextViewerDriver.cc:56
↓ 5 callers
Function
SLL_SetNext
libs/tcmalloc-1.4/src/linked_list.h:66
↓ 5 callers
Function
Set
9 */
avida-core/source/main/cAvidaConfig.h:87
↓ 5 callers
Method
SetArguments
avida-core/source/script/ASTree.h:604
↓ 5 callers
Method
SetCellData
avida-core/source/cpu/cTestCPUInterface.h:75
↓ 5 callers
Method
SetLineageLabel
avida-core/source/main/cOrganism.h:160
↓ 5 callers
Method
SetLinesExecuted
avida-core/source/main/cPhenotype.h:601
↓ 5 callers
Method
SetOutflow
avida-core/source/main/cResource.h:250
↓ 5 callers
Method
SetParentFT
avida-core/source/main/cOrganism.h:617
↓ 5 callers
Method
SetResourceInflow
This method sets the inflow of the named resource. * It changes this value in the environment, then updates it in the * actual population's resource
avida-core/source/main/cPopulation.cc:7199
↓ 5 callers
Method
SetVar
avida-core/source/script/ASTree.h:151
↓ 5 callers
Method
TaskDone
avida-core/source/main/cReactionResult.cc:249
↓ 5 callers
Method
Update
avida-core/source/viewer/Map.cc:107
↓ 5 callers
Method
UpdateCellResources
avida-core/source/main/cPopulation.cc:7169
↓ 5 callers
Method
Width
Windows returns the screen width and height
avida-core/source/targets/avida-viewer/cTextWindow.h:76
↓ 5 callers
Function
_sync
libs/tcmalloc-1.4/src/atomicops-internals-linuxppc.h:70
↓ 5 callers
Function
cpp_alloc
libs/tcmalloc-1.4/src/tcmalloc.cc:862
↓ 5 callers
Function
distance
avida-core/source/main/cDemeNetworkUtils.h:135
↓ 5 callers
Function
do_memalign
For use by exported routines below that want specific alignments Note: this code can be slow, and can significantly fragment memory. The expectation
libs/tcmalloc-1.4/src/tcmalloc.cc:757
↓ 5 callers
Function
pages
Convert byte size into pages. This won't overflow, but may return an unreasonably large value if bytes is huge enough.
libs/tcmalloc-1.4/src/common.h:100
↓ 5 callers
Method
set_max_length
Set the maximum length of the list. If 'new_max' > length(), the client is responsible for removing objects from the list.
libs/tcmalloc-1.4/src/thread_cache.h:180
↓ 4 callers
Method
Activate
avida-core/source/targets/avida-viewer/cMenuWindow.cc:36
↓ 4 callers
Method
ActiveFunctionIterator
-------- Externally Visible Type Dependent Methods --------
avida-core/source/script/cSymbolTable.h:132
↓ 4 callers
Method
AddBonus
avida-core/source/main/cReactionResult.cc:148
↓ 4 callers
Method
AddMemSpace
avida-core/source/viewer/OrganismTrace.cc:474
↓ 4 callers
Method
AddMessagePredicate
! This method adds a message predicate to the list of all predicates. Each predicate in the list is evaluated for every sent message. NOTE: cStat
avida-core/source/main/cStats.cc:1884
↓ 4 callers
Method
AddNewTaskCount
avida-core/source/main/cStats.h:680
↓ 4 callers
Method
AddObject
avida-core/include/public/avida/viewer/Graphic.h:118
↓ 4 callers
Method
AddPassiveReference
avida-core/source/systematics/Group.cc:48
↓ 4 callers
Method
AddPredAV
Adds an organism to the cell's predator (input) avatars, then keeps the list mixed by swapping the new avatar into a random position in the array
avida-core/source/main/cPopulationCell.cc:330
↓ 4 callers
Method
AddPredPreyAV
Creates a new avatar based on the organism's forage target as a predator or prey, and adds it to the cell
avida-core/source/main/cPopulationInterface.cc:1752
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