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github.com/califano-lab/ARACNe-AP @main

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99 symbols 156 edges 12 files 17 documented · 17%
What it actually does AI analysis from the code graph — generated when you open this
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Core symbols most depended-on inside this repo

sort
called by 10
common/Sorter.java
getInformation
called by 9
aracne/MI.java
rankVector
called by 7
common/Methods.java
computeMI
called by 5
aracne/MI.java
rank
called by 5
common/ExpressionMatrix.java
fitNull
called by 4
aracne/MI.java
setSampleNumber
called by 4
aracne/MI.java
getSamples
called by 4
common/ExpressionMatrix.java

Shape

Method 84
Class 15

Languages

Java100%

Modules by API surface

aracne/MI.java22 symbols
common/DataParser.java12 symbols
common/Methods.java11 symbols
common/ExpressionMatrix.java11 symbols
common/DataVector.java7 symbols
aracne/Aracne.java7 symbols
common/Sorter.java6 symbols
common/DataMatrix.java6 symbols
aracne/DPI.java6 symbols
aracne/BootstrapConsolidator.java6 symbols
common/Stats.java3 symbols
common/Normalization.java2 symbols

For agents

$ claude mcp add ARACNe-AP \
  -- python -m otcore.mcp_server <graph>

⬇ download graph artifact