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github.com/biotite-dev/biotite @v1.7.1

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repository ↗ · DeepWiki ↗ · release v1.7.1 ↗ · + Follow

2,780 symbols 12,093 edges 426 files 1,477 documented · 53% 1 cross-repo links

What it actually does AI analysis from the code graph — generated when you open this

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Core symbols most depended-on inside this repo

array

called by 315

src/biotite/structure/io/pdbx/cif.py

src/biotite/sequence/io/gff/file.py

array_length

called by 248

src/biotite/structure/atoms.py

src/biotite/structure/io/mol/mol.py

join

called by 145

src/biotite/application/sra/app.py

as_array

called by 104

src/rust/structure/bonds.rs

Shape

Function 1,456

Method 1,112

Class 197

Route 10

Enum 5

Languages

Python94%

Rust6%

Modules by API surface

src/biotite/structure/io/pdbx/cif.py77 symbols

src/biotite/structure/atoms.py68 symbols

src/biotite/structure/io/pdbx/bcif.py51 symbols

src/rust/structure/bonds.rs50 symbols

src/biotite/sequence/annotation.py50 symbols

src/biotite/database/pubchem/query.py50 symbols

src/biotite/database/rcsb/query.py48 symbols

src/biotite/structure/io/pdbx/encoding.py47 symbols

src/biotite/structure/io/mol/sdf.py47 symbols

src/biotite/interface/pymol/object.py42 symbols

tests/structure/io/test_pdbx.py38 symbols

src/biotite/structure/io/pdbx/convert.py37 symbols

Used by 1 indexed graphs manifest dependencies, hub-wide

github.com/bytedance/Protenix

For agents

$ claude mcp add biotite \
  -- python -m otcore.mcp_server <graph>

⬇ download graph artifact