Record an agent turn as an Atomic change. This is the function that bridges the agent world into the VCS world. It builds a `ChangeHeader`, `Provenan

Remove a file or directory. If `recursive` is true, removes directories and their contents.

Initialize a repo (default view `dev`) with a base file recorded on `dev`.

Look up the index for a hash, returning an error if not found. This is a convenience method that wraps [`lookup`](Self::lookup) and converts `None` t

Resolve a source path that may be a `$variable` reference. If it starts with `$`, extract vault paths from the bound nodes (using the node label or m

Compute a single row using an explicit verifier keypair (no global store).

Execute the record command. # Process 1. Find and open the repository 2. Get the commit message (from argument, editor, or prompt) 3. Detect changes

Save remote configuration for this repository. # Arguments `config` - The remote configuration to save # Errors Returns an error if the config fil

Search the content index. Returns matching lines with file paths, line numbers, and content. Supports path filtering, file type filtering, and case-i

Set the CRDT operations for this file.

Sets the token kind.

Sign a message.

The value covered by a signature: the document minus its `proof` (the standard Data Integrity shape). `contentHash` is retained so the signature also

A hash of the source lift inputs, recorded in the sidecar so a later edit to the intent can be detected as making the attestation stale. This is a sta

A hash of the source lift inputs, recorded so a later edit to the memory can be detected as making the attestation stale. Standalone digest of (frontm

Get statistics about the store.

Set the suggestion type.

Create a summary string for display. # Example ```rust use atomic_core::output::repo::OutputOutcome; let mut outcome = OutputOutcome::new(); outcom

Serialize to a compact text summary for LLM compaction context. The summary is structured but concise, optimized for token budget: - Lists goals (one

Tokenize file content into FileOps for display purposes. This is the **on-the-fly fallback** — when `diff`/`log`/`blame` needs semantic data but the

Set the tool used.

Truncate a string for display.

Filter by usage.

Validate the view name.

Delete a vault entry by path. Also updates the manifest.

Stop a vault goal. With `promote: true`: marks the goal as "completed". With `discard: true`: deletes the goal entirely. Default (neither flag): mark

Full-text search over knowledge graph nodes. `pool` controls the candidate heap size — how many nodes are scored before the top `limit` are selected.

Execute `f` while holding an exclusive file lock on the session's accumulator. The lock file is `{session_dir}/graph.lock`. The callback receives a

Builder: set the AI model.

Builder: set the diff algorithm.

Builder: set the `--all` flag.

Builder: set the --all flag.

Builder: set the author.

Builder: set files to record.

Builder: set the identifier.

Sets whether to merge consecutive whitespace tokens. When enabled, multiple spaces or tabs are combined into a single whitespace token.

Builder: set the path filter.

Set the prefix filter. # Arguments `prefix` - Path prefix to filter files

Set the tagged flag. Tagged changes represent named snapshots in the history. # Arguments `tagged` - Whether this change is tagged # Example ```r

Write the optional PROVENANCE section. Contains AI provenance metadata for the change. This section is optional — omit it if there's no AI provenance

Write a recorded change to the repository. This method inserts a change that was just recorded, updating both the graph and the tree tables. It's the

Mirror `attest`'s tracked-vault write (body = pretty JSON + '\n').

Add a successfully collected file.

Add a conflict to the result. # Arguments `conflict` - The conflict to add

Add a deleted file to the result.

Add a down-context position (successor). Down-context vertices are the successors where new content will be inserted before.

Add a hunk (graph operation) to this change.

Updates statistics with a tokenized line.

Add a missing context conflict.

Add an unchanged file to the result.

Set the AI vendor identifier.

Appends content to the buffer and returns the byte range.

Append a human gate node (permission requested). Returns the new node's ID.

Get the separator as a byte slice.

Wrap a local id into `urn:atomic:<kind>:<local>` unless already a urn.

Attach unhashed turn data to a change. Serializes `UnhashedTurnData` as JSON and stores it under the `"agent_turn"` key in `change.unhashed`. Creates

The tracked-vault path for an intent's attestation: `attestations/<sanitized-normalized-id>/attested.md`.

Add multiple authors.

Build the delegation scope.

Build a Go-like source file with `count` distinct top-level functions, each with a unique, greppable marker line. Mirrors the shape of the real-world

Build a graph where the vertex at `parent_idx` has the given child vertex indices. Vertices are pushed in order 0..N where 0 is DUMMY.

Return a deterministic, causality-aware ordering for a session's turns. Stored provenance can arrive in any order (for example during pull). A timest

Collect all change `NodeId`s visible from a view and expand their indexed dependency closure without loading `.change` files. This is the dependency-

Returns the number of registered agents.

Create a directory and all parent directories.

Create a multi-progress container for parallel progress bars. A [`MultiProgress`] allows displaying multiple progress bars simultaneously, useful for

Create a test change with some content.

Remove learnings that already exist in the context file. Returns a new `Learnings` with only the Repo and Workflow entries that are not already prese

Remove a file from the FILE_INDEX. Call this when a file is deleted (e.g., during git import cleanup) so that `status` doesn't show it as a stale ent

Set an optional description.

Detect the encoding of content. Analyzes content to determine if it's valid UTF-8 text or binary data. # Arguments `content` - The content to analy