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hub / github.com/arq5x/bedtools2 / loadBedFileIntoMap

Method loadBedFileIntoMap

src/utils/bedFile/bedFile.cpp:661–672  ·  view source on GitHub ↗

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659void BedFile::setBed12 (bool isBed12) { this->isBed12 = isBed12; }
660
661void BedFile::loadBedFileIntoMap() {
662
663 BED bedEntry;
664
665 Open();
666 while (GetNextBed(bedEntry)) {
667 if (_status == BED_VALID) {
668 addBEDIntoMap(bedEntry);
669 }
670 }
671 Close();
672}
673
674void BedFile::loadBedFileIntoMergedMap() {
675

Callers 6

WindowIntersectBedMethod · 0.80
WindowIntersectBamMethod · 0.80
IntersectBedPEMethod · 0.80
IntersectBamPEMethod · 0.80
BedShuffleMethod · 0.80
OpenAnnoFilesMethod · 0.80

Calls

no outgoing calls

Tested by

no test coverage detected