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Functions1,668 in github.com/apple/embedding-atlas

↓ 1 callersMethod_createMapperTable
* Create the id-based mapper table `(__main_id, __aux_id)` for an auxiliary table, * derived from its relation. No-op if the table declares no rela
packages/viewer/src/stores/embedding_atlas_store.ts:239
↓ 1 callersFunction_deep_merge
(base: dict, overrides: dict)
packages/backend/embedding_atlas/data_source.py:18
↓ 1 callersFunction_default_embedder
(modality: str)
packages/backend/embedding_atlas/projection.py:427
↓ 1 callersFunction_embeddings_html
Build the HTML section with canvas elements for embedding visualization.
packages/umap/benchmark/benchmark/html_report.py:348
↓ 1 callersFunction_get_constants
(cache_root: Path)
packages/backend/embedding_atlas/cache.py:311
↓ 1 callersFunction_gz_b64
Gzip compress and base64 encode bytes.
packages/umap/benchmark/benchmark/html_report.py:169
↓ 1 callersMethod_handle_message
(self, data: str)
packages/backend/embedding_atlas/server.py:240
↓ 1 callersFunction_kabsch
Optimal rotation + translation (Kabsch). Returns (transformed, error).
packages/umap/benchmark/benchmark/align.py:6
↓ 1 callersFunction_load_embeddings
Load, align, and normalize UMAP embeddings for all (n_points, metric, threads) groups. Returns list of dicts with gzipped+base64-encoded embeddin
packages/umap/benchmark/benchmark/html_report.py:181
↓ 1 callersMethod_makeAuxTableFilter
(table: string)
packages/viewer/src/stores/embedding_atlas_store.ts:264
↓ 1 callersFunction_make_random_image_bytes
Generate a random RGB image as PNG bytes.
packages/backend/tests/test_projection_transformers.py:19
↓ 1 callersFunction_make_random_image_bytes
(width=64, height=64, seed=0)
packages/backend/tests/test_projection.py:26
↓ 1 callersFunction_make_random_image_bytes
(width=64, height=64, seed=0)
packages/backend/tests/test_projection_litellm.py:27
↓ 1 callersFunction_make_random_wav_bytes
Generate a random mono WAV file as bytes.
packages/backend/tests/test_projection_transformers.py:29
↓ 1 callersMethod_popMax
()
packages/component/src/lib/dynamic_label_placement/priority_queue.ts:30
↓ 1 callersFunction_prepare_data
Prepare rows for Vega-Lite: add impl_display, cast numeric fields.
packages/umap/benchmark/benchmark/html_report.py:29
↓ 1 callersFunction_read_csv
Read CSV file and return list of dicts.
packages/umap/benchmark/benchmark/html_report.py:12
↓ 1 callersFunction_results_table_html
Build an HTML table from result rows.
packages/umap/benchmark/benchmark/html_report.py:146
↓ 1 callersFunction_run_embedding
Run an embedder function over *data* in batches, return concatenated result.
packages/backend/embedding_atlas/projection.py:395
↓ 1 callersFunction_run_umap
( hidden_vectors: np.ndarray, *, umap_args: dict | None = None, )
packages/backend/embedding_atlas/projection.py:363
↓ 1 callersFunction_timing_vegalite_spec
Build a Vega-Lite spec for timing charts faceted by metric x threads (and dim for nndescent).
packages/umap/benchmark/benchmark/html_report.py:49
↓ 1 callersFunction_validate_additional_tables
(additional_tables: dict | None)
packages/backend/embedding_atlas/data_source.py:31
↓ 1 callersFunctionactionFromClass
( ComponentClass: new ( node: N, props: P, ) => { update?: ((props: P) => void) | undefined;
packages/component/src/lib/embedding_view/custom_component_helper.ts:5
↓ 1 callersMethodaddChartToLayout
(layoutId: string, spec: any = { type: "builder", title: "New" })
packages/viewer/src/stores/embedding_atlas_store.ts:518
↓ 1 callersMethodaddLayout
(type: "list" | "dashboard")
packages/viewer/src/stores/embedding_atlas_store.ts:425
↓ 1 callersMethodaddPoints
(points: { id: string | number; text: string }[])
packages/viewer/src/search/search.worker.ts:28
↓ 1 callersMethodadd_assign
Element-wise addition: self += other.
packages/umap/umap/src/spectral.rs:324
↓ 1 callersFunctionadjustForGray
(hex: string, lightnessShift: number = 0)
packages/viewer/src/charts/common/theme.ts:58
↓ 1 callersFunctionadjusted
(ms: number)
packages/viewer/src/charts/common/binning.ts:192
↓ 1 callersFunctionaggregateByStem
Aggregate words by their stems and track the most frequent version. * Returns a map with stemmed words as keys, and the most frequent version and tot
packages/component/src/lib/text_summarizer/text_summarizer.ts:105
↓ 1 callersMethodalign2
()
packages/component/src/lib/webgpu_renderer/uniforms.ts:44
↓ 1 callersFunctionalign_to_reference
Align emb to ref_emb using rotation + translation, allowing a flip. Tries the embedding as-is and with x-axis flipped, picks whichever gives
packages/umap/benchmark/benchmark/align.py:43
↓ 1 callersFunctionalphaRamp
* A d3 interpolator from fully transparent to a medium orange, ramping only the * alpha channel (the rgb stays constant, so the hue never shifts). Us
packages/viewer/src/highlight/registry.ts:49
↓ 1 callersFunctionalternative_cosine
(x: &[f32], y: &[f32])
packages/umap/nndescent/src/distance.rs:114
↓ 1 callersFunctionangular_hub_split
Angular hub-based split: uses top-3 highest-degree points to generate normalized hyperplanes between all pairs, picks the most balanced split.
packages/umap/nndescent/src/rp_trees.rs:1064
↓ 1 callersFunctionangular_random_projection_split
Angular random projection split: picks 2 random points, computes normalized difference as hyperplane, splits by sign of projection.
packages/umap/nndescent/src/rp_trees.rs:82
↓ 1 callersFunctionapplySourceFilter
(q: Q, sig: ClientSignature)
packages/viewer/src/charts/features/features_list_store.ts:552
↓ 1 callersFunctionapply_laplacian
Apply L*v = v - D^{-1/2} * A * (D^{-1/2} * v) to each column of a Block. All computation is done in f64 to avoid precision loss in the eigensolver.
packages/umap/umap/src/spectral.rs:339
↓ 1 callersFunctionapply_logging_config
()
packages/backend/embedding_atlas/utils.py:93
↓ 1 callersMethodas_mut_slice
(&mut self)
packages/density-clustering/density_clustering/src/array_2d.rs:55
↓ 1 callersFunctionassemble_gram
Assemble a symmetric block Gram matrix from sub-blocks. blocks is a list of (row_block, col_block, sub_matrix) triples. Each sub_matrix is (rows × col
packages/umap/umap/src/spectral.rs:366
↓ 1 callersFunctionasync_compute_projection
Async version of ``compute_projection``. Use this when calling from within a running async event loop (e.g. Jupyter notebooks)::
packages/backend/embedding_atlas/projection.py:95
↓ 1 callersFunctionaudioToDataUrl
(value: any)
packages/utils/src/media.ts:7
↓ 1 callersFunctionbase64
(values)
packages/utils/test/media.test.js:31
↓ 1 callersFunctionbase64
(values: number[])
packages/viewer/test/renderer_utils.test.ts:15
↓ 1 callersFunctionbase64Encode
(bytes)
packages/docs/examples/utils.js:22
↓ 1 callersMethodbatch
(data: any[])
packages/viewer/src/embedding/projector.ts:40
↓ 1 callersFunctionbatch_search
Search for k nearest neighbors of multiple query points (parallel).
packages/umap/nndescent/src/search.rs:160
↓ 1 callersFunctionbatchedEmbeddings
* Compose the chunk → dispatch → concat pipeline. Calls that fit in one chunk * skip the pool overhead and run inline. * * `getConcurrency()` is co
packages/viewer/src/inference/embedding.ts:80
↓ 1 callersFunctionbench_env
Return environment dict for benchmark subprocesses.
packages/umap/benchmark/benchmark/common.py:43
↓ 1 callersFunctionbgFor
Background color for bucket `k` of `levels`. The interpolator ramps alpha, * so the text underneath keeps its own color — we never set a foreground.
packages/viewer/src/highlight/registry.ts:85
↓ 1 callersFunctionbgl_entry
Helper to create a storage buffer bind group layout entry.
packages/umap/nndescent/src/gpu.rs:1024
↓ 1 callersMethodbindLifecycle
* Subscribe to the two signature derivations that drive all data loading. * * - reloadSources only depends on `{features}`. It does NOT include
packages/viewer/src/charts/features/features_list_store.ts:258
↓ 1 callersFunctionbit_hamming
(x: &[f32], y: &[f32])
packages/umap/nndescent/src/distance.rs:430
↓ 1 callersFunctionbit_jaccard
(x: &[f32], y: &[f32])
packages/umap/nndescent/src/distance.rs:441
↓ 1 callersFunctionblackman
(i: usize, length: usize)
packages/density-clustering/density_clustering/src/polygon.rs:28
↓ 1 callersFunctionblurActiveElement
()
packages/utils/src/interaction_handler.ts:159
↓ 1 callersFunctionbrute_force_knn
Compute brute-force k-nearest neighbors for accuracy comparison.
packages/umap/nndescent/tests/test_gpu.rs:24
↓ 1 callersFunctionbuildAggregationQuery
* Combined aggregation query. * * The query is built around an exploded CTE — one row per * (data row, feature occurrence) — that the count and cla
packages/viewer/src/charts/features/features_list_store.ts:610
↓ 1 callersFunctionbuildChart
( ctx: BuildContext, outputs: Writable<ChartOutputs | undefined>, selections: Writable<SelectionOutputs[
packages/viewer/src/charts/spec/runtime.ts:246
↓ 1 callersFunctionbuildData
(agg: AggregationResult | null, spec: FeaturesListSpec)
packages/viewer/src/charts/features/features_list_store.ts:718
↓ 1 callersFunctionbuildEncoding
( ctx: BuildContext, from: SQL.FromExpr, channel: Channel | undefined, encoding: Encoding, fieldsInG
packages/viewer/src/charts/spec/runtime.ts:429
↓ 1 callersMethodbuildIndexIfNeeded
(predicate: any | null)
packages/viewer/src/search/search.ts:47
↓ 1 callersFunctionbuildLayer
(ctx: BuildContext, layer: Layer, layerIndex: number)
packages/viewer/src/charts/spec/runtime.ts:284
↓ 1 callersMethodbuild_async
Build the NNDescent index (async version). Use this on WASM with GPU where `pollster::block_on` cannot block. On native, prefer [`build`] which wraps
packages/umap/nndescent/src/lib.rs:197
↓ 1 callersFunctionbyLabel
(a: ListItem, b: ListItem)
packages/viewer/src/charts/features/features_list_store.ts:908
↓ 1 callersFunctionbyTotal
(a: ListItem, b: ListItem)
packages/viewer/src/charts/features/features_list_store.ts:907
↓ 1 callersMethodbyteOffset
()
packages/component/src/lib/webgpu_renderer/uniforms.ts:95
↓ 1 callersFunctionbytes
(values: number[])
packages/viewer/test/renderer_utils.test.ts:11
↓ 1 callersMethodcacheGet
(key: string)
packages/viewer/src/app/backend_data_source.ts:131
↓ 1 callersMethodcacheSet
(key: string, value: any)
packages/viewer/src/app/backend_data_source.ts:139
↓ 1 callersMethodcache_set
(self, name: str, data)
packages/backend/embedding_atlas/data_source.py:78
↓ 1 callersFunctioncalibrateSimilarityRange
( embed: (inputs: string[]) => Promise<{ data: Float32Array; dim: number }>, pairs: CalibrationPair[], b
packages/viewer/src/embedding/scorer-calibration.ts:95
↓ 1 callersMethodcall
Call a registered function on the worker.
packages/utils/src/worker_helper.ts:78
↓ 1 callersFunctionchaikin
(points: Point[], iterations: number)
packages/component/src/lib/embedding_view/simplify_polygon.ts:6
↓ 1 callersFunctionchartOutputs
( spec: ChartSpec, scaleHints: Record<Channel, ScaleHints>, layerOutputs: (LayerOutputs | undefined)[],
packages/viewer/src/charts/spec/runtime.ts:924
↓ 1 callersMethodcheck
Check if the given rect is occupied, return true if any bit is true
packages/viewer/src/layouts/dashboard/occupancy_map.ts:53
↓ 1 callersMethodcheck_and_mark_visited
Check if visited and mark as visited in one operation. Returns true if ALREADY visited (before marking).
packages/umap/nndescent/src/utils.rs:29
↓ 1 callersFunctionchecked_heap_push
Push a value into a max-heap, checking for duplicates first. Returns 1 if inserted, 0 if rejected or duplicate.
packages/umap/nndescent/src/heap.rs:75
↓ 1 callersFunctioncircleAlpha
Returns the alpha value of a circle's pixel at (px, py). * The circle is centered at the center of pixel (0, 0) with the given radius. * The alpha v
packages/component/src/lib/webgl2_renderer/disc_blur.ts:134
↓ 1 callersFunctionclampRetryAfter
(ms: number)
packages/viewer/src/inference/utils.ts:100
↓ 1 callersFunctionclassToAction
(Component: CustomComponentClass<E, T>)
packages/viewer/src/renderers/renderer_types.ts:54
↓ 1 callersFunctionclassifyLabel
(label: string)
packages/viewer/src/charts/features/binary_polarity.ts:115
↓ 1 callersMethodclear
()
packages/viewer/src/search/search.worker.ts:22
↓ 1 callersFunctioncli
UMAP / NNDescent benchmark suite.
packages/umap/benchmark/benchmark/__main__.py:7
↓ 1 callersFunctionclip
(val: f32)
packages/umap/umap/src/optimize.rs:41
↓ 1 callersMethodclose
()
packages/viewer/src/app/mcp_server.ts:111
↓ 1 callersFunctioncluster_neighbor_map_grouping
(graph: &mut ClusterGraph, max_density_scaler: f32)
packages/density-clustering/density_clustering/src/find_clusters.rs:465
↓ 1 callersFunctioncluster_neighbor_map_union
(graph: &mut ClusterGraph, threshold: f32)
packages/density-clustering/density_clustering/src/find_clusters.rs:492
↓ 1 callersFunctioncoalesceEmbeddings
(embedFn: (inputs: EmbeddingInput[]) => Promise<EmbeddingsResult>)
packages/viewer/src/inference/embedding.ts:114
↓ 1 callersFunctioncollect_active_edges
Collect the edges that are due to be sampled at `current_epoch`, advancing the per-edge sampling schedule counters in place. Returns `(edge_index, n_
packages/umap/umap/src/optimize.rs:65
↓ 1 callersFunctioncolumnPolarity
(columnName: string)
packages/viewer/src/charts/features/binary_polarity.ts:140
↓ 1 callersFunctioncombine
(...list: string[])
packages/component/src/lib/text_summarizer/stop_words.ts:23
↓ 1 callersFunctioncompileLiquidTemplate
(template: string)
packages/viewer/src/utils/html_template.ts:17
↓ 1 callersFunctioncompileShader
(gl: WebGL2RenderingContext, type: number, source: string)
packages/component/src/lib/webgl2_renderer/utils.ts:52
↓ 1 callersFunctioncompleteCross
(data: DataTable, by: string, field: string, value: DataValue)
packages/viewer/src/charts/spec/runtime.ts:721
↓ 1 callersFunctioncompress
( data: Uint8Array<ArrayBuffer>, format: CompressionFormat = "gzip", )
packages/utils/src/compression.ts:3
↓ 1 callersFunctioncomputeAllFieldStats
Compute distribution stats for all fields used in a chart.
packages/viewer/src/charts/spec/runtime.ts:228
↓ 1 callersFunctioncomputeDispatch
(count: number)
packages/component/src/lib/webgpu_renderer/downsample.ts:14
↓ 1 callersMethodcompute_all_distances
Compute distances without threshold filtering — all distances are returned. Used for `init_rp_tree` where the heap is initially empty.
packages/umap/nndescent/src/gpu.rs:702
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