Method filter_mismatches

src/plot.rs:218–232

Filters out low-frequency mismatches and merges them into the match count m.

(&mut self, threshold: f64)

impl BaseCoverage {
    /// Filters out low-frequency mismatches and merges them into the match count m.
    pub fn filter_mismatches(&mut self, threshold: f64) {
        let total = self.a + self.t + self.g + self.c + self.m;
        if total == 0 {
            return;
        }

        let mut removed = 0;
        for b in [&mut self.a, &mut self.t, &mut self.g, &mut self.c] {
            if (*b as f64 / total as f64 * 100.0) < threshold {
                removed += *b;
                *b = 0;
            }
        }
        self.m += removed;
    }
}

#[derive(Serialize, Debug, Eq, PartialEq, Default, Clone)]